BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0103.p (552 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll8067_5 [T] COG0642 Signal transduction histidine kinase Mlo M... 234 4e-61 AGl1617_2 [T] COG0642 Signal transduction histidine kinase Atu A... 211 4e-54 CC3225_2 [T] COG0642 Signal transduction histidine kinase Ccr Ca... 204 5e-52 ECs5074_1 [T] COG0642 Signal transduction histidine kinase Ecs E... 197 6e-50 Z5692_1 [T] COG0642 Signal transduction histidine kinase EcZ Esc... 197 6e-50 >mll8067_5 [T] COG0642 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 297 Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 124/251 (49%), Positives = 165/251 (65%), Gaps = 4/251 (1%) Query: 156 DISRRRDAEQALGQARKMEALGQLTGGIAHDFNNLLQVITGYLDMINLALRSDKPDLARV 215 +++ R AE+ L Q +KM+A+GQLTGGIAHDFNN+L VI G L+++ L + D+ R Sbjct: 27 EVAERSKAEEQLRQVQKMDAVGQLTGGIAHDFNNMLAVIIGGLNLLQRKLSKGETDVGRF 86 Query: 216 ARSADSIRKASGKAAMLTQQLLAFARKQRLEGRTINLNSLTEGFTDLVSRTLGGDITVQT 275 A + +AA LTQ+LLAF+R+Q L+ IN N L G T+L+ RTLG I V+T Sbjct: 87 VEGA---MDGAHRAAALTQRLLAFSRQQPLKPEPINANRLVGGMTELLMRTLGETIKVET 143 Query: 276 ELARGLWNCRLDPTQMEVALLNVLINARDAMNGRGRVRIRTANEDLADPDRAVQLGLKEG 335 GLW + DP+Q+E ALLN+ +NARDAM G++ I T+N D A + + G Sbjct: 144 AFGAGLWQVKADPSQLESALLNLSVNARDAMPNGGKLTIETSNA-YVDERYARESAIAAG 202 Query: 336 LYVSIAVTDDGPGIAPDILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGSVRITSGA 395 +V +AVTD G G+ PD+L + DPF+TTK GKGTGLGLS VYGFV+QSGG+VRI S Sbjct: 203 QFVLVAVTDTGTGMTPDVLAKAFDPFYTTKGVGKGTGLGLSQVYGFVRQSGGNVRIYSEP 262 Query: 396 EGGTTVTIYFP 406 GTT+ IY P Sbjct: 263 GVGTTIKIYLP 273 >AGl1617_2 [T] COG0642 Signal transduction histidine kinase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 249 Score = 211 bits (537), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 118/233 (50%), Positives = 145/233 (62%), Gaps = 6/233 (2%) Query: 175 ALGQLTGGIAHDFNNLLQVITGYLDMINLALRSDKPDLARVARSADSIRKASGKAAMLTQ 234 ++GQLTGG+AHDFNNLLQVI G L + L D R R ++ + A L Sbjct: 1 SIGQLTGGVAHDFNNLLQVIAGNLQL----LSKDVIGNERAERRLENALAGVHRGAKLAS 56 Query: 235 QLLAFARKQRLEGRTINLNSLTEGFTDLVSRTLGGDITVQTELARGLWNCRLDPTQMEVA 294 QLLAF R+Q LE R IN+ G DL+ R+LG I V+ + GLWN DP Q+E A Sbjct: 57 QLLAFGRRQALEPRVINIARFVTGMDDLLRRSLGEGIEVEVITSGGLWNTYADPNQVENA 116 Query: 295 LLNVLINARDAMNGRGRVRIRTANEDLADPDRAVQLG-LKEGLYVSIAVTDDGPGIAPDI 353 LLN+ INARDAM G G++ I N L D D A + + G YV +AVTD G G++P+I Sbjct: 117 LLNLAINARDAMEGHGKLTIEVGNAVL-DRDYARKHSEVSAGQYVMLAVTDTGSGMSPEI 175 Query: 354 LPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGSVRITSGAEGGTTVTIYFP 406 L +V +PFF+TK EGKGTGLGLSMVYGF KQS G V I S GTTV +Y P Sbjct: 176 LEKVFEPFFSTKPEGKGTGLGLSMVYGFAKQSSGHVNIYSEVGQGTTVKMYLP 228 >CC3225_2 [T] COG0642 Signal transduction histidine kinase Ccr Caulobacter vibrioides Length = 257 Score = 204 bits (518), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 120/235 (51%), Positives = 150/235 (63%), Gaps = 3/235 (1%) Query: 172 KMEALGQLTGGIAHDFNNLLQVITGYLDMINLALRSDKPDLARVARSADSIRKASGKAAM 231 KMEA+GQLTGG+AHDFNNLL I+G +MI L + V R + + A+ +AA Sbjct: 1 KMEAVGQLTGGLAHDFNNLLAGISGSFEMIGARLAQGRA--GEVERYLTAGQGAARRAAA 58 Query: 232 LTQQLLAFARKQRLEGRTINLNSLTEGFTDLVSRTLGGDITVQTELARGLWNCRLDPTQM 291 LT +LLAF+R+Q L R + +N L F +LV RT+G I V+ A GLW +D Q+ Sbjct: 59 LTHRLLAFSRRQTLAPRPMVVNRLLPDFVELVRRTVGPSIKVENVAATGLWPTLVDANQL 118 Query: 292 EVALLNVLINARDAMNGRGRVRIRTANEDLADPDRAVQLGLKEGLYVSIAVTDDGPGIAP 351 E ALLN+ INARDAM G++ I T+N L P A + GL G YVS++V+D G GI Sbjct: 119 ENALLNLCINARDAMPDGGKIMIETSNRWLDGPA-AREHGLDPGQYVSVSVSDTGTGIDK 177 Query: 352 DILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGSVRITSGAEGGTTVTIYFP 406 L RV DPFFTTK G+GTGLGLSMVYGF +QS G VRI S GTTV +Y P Sbjct: 178 ATLERVFDPFFTTKPIGQGTGLGLSMVYGFARQSNGHVRIYSEVGHGTTVCLYLP 232 >ECs5074_1 [T] COG0642 Signal transduction histidine kinase Ecs Escherichia coli O157:H7 Length = 640 Score = 197 bits (501), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 107/258 (41%), Positives = 168/258 (65%), Gaps = 17/258 (6%) Query: 152 SSQLDISR--RRDAEQALGQARKMEALGQLTGGIAHDFNNLLQVITGYLDMINLALRSDK 209 ++Q++I++ R+ E+AL ++K++A+GQLTGG+AHDFNNLL VI G L+++N D Sbjct: 375 TTQMEIAQTERQGLEEALLHSQKLKAVGQLTGGLAHDFNNLLAVIIGSLELVN----PDS 430 Query: 210 PDLARVARSADSIRKASGKAAMLTQQLLAFARKQRLEGRTINLNSLTEGFTDLVSRTLGG 269 PD R+ R+ +A+ + A+LTQ+LLAF+RKQ L + + L +L E ++L+ +L Sbjct: 431 PDAPRIQRAL----QAAERGALLTQRLLAFSRKQSLHPQAVELKTLLEELSELMRHSLPA 486 Query: 270 DITVQTELARGLWNCRLDPTQMEVALLNVLINARDAMNGR-GRVRIRTANEDLADPDRAV 328 + ++ E W +D +Q+E A++N+++NARDAM G+ G ++IRT N+ + Sbjct: 487 TLALEIEAQSPAWPAWIDISQLENAIINLVMNARDAMEGQTGIIKIRTWNQRVTRSS--- 543 Query: 329 QLGLKEGLYVSIAVTDDGPGIAPDILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGS 388 G ++ + V++ V D G G++ + +V +PFFTTK G G+GLGLSMVYGFV+QSGG Sbjct: 544 --GQRQDM-VALEVIDHGCGMSQAVKSQVFEPFFTTKQTGSGSGLGLSMVYGFVRQSGGR 600 Query: 389 VRITSGAEGGTTVTIYFP 406 V I S GTTV + P Sbjct: 601 VEIESAPGQGTTVRLQLP 618 >Z5692_1 [T] COG0642 Signal transduction histidine kinase EcZ Escherichia coli O157:H7 EDL933 Length = 640 Score = 197 bits (501), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 107/258 (41%), Positives = 168/258 (65%), Gaps = 17/258 (6%) Query: 152 SSQLDISR--RRDAEQALGQARKMEALGQLTGGIAHDFNNLLQVITGYLDMINLALRSDK 209 ++Q++I++ R+ E+AL ++K++A+GQLTGG+AHDFNNLL VI G L+++N D Sbjct: 375 TTQMEIAQTERQGLEEALLHSQKLKAVGQLTGGLAHDFNNLLAVIIGSLELVN----PDS 430 Query: 210 PDLARVARSADSIRKASGKAAMLTQQLLAFARKQRLEGRTINLNSLTEGFTDLVSRTLGG 269 PD R+ R+ +A+ + A+LTQ+LLAF+RKQ L + + L +L E ++L+ +L Sbjct: 431 PDAPRIQRAL----QAAERGALLTQRLLAFSRKQSLHPQAVELKTLLEELSELMRHSLPA 486 Query: 270 DITVQTELARGLWNCRLDPTQMEVALLNVLINARDAMNGR-GRVRIRTANEDLADPDRAV 328 + ++ E W +D +Q+E A++N+++NARDAM G+ G ++IRT N+ + Sbjct: 487 TLALEIEAQSPAWPAWIDISQLENAIINLVMNARDAMEGQTGIIKIRTWNQRVTRSS--- 543 Query: 329 QLGLKEGLYVSIAVTDDGPGIAPDILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGS 388 G ++ + V++ V D G G++ + +V +PFFTTK G G+GLGLSMVYGFV+QSGG Sbjct: 544 --GQRQDM-VALEVIDHGCGMSQAVKSQVFEPFFTTKQTGSGSGLGLSMVYGFVRQSGGR 600 Query: 389 VRITSGAEGGTTVTIYFP 406 V I S GTTV + P Sbjct: 601 VEIESAPGQGTTVRLQLP 618