BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0090.p (255 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2115 [S] COG3748 Predicted membrane protein Rso Ralstonia sol... 315 6e-86 BMEI1572 [S] COG3748 Predicted membrane protein Bme Brucella mel... 207 3e-53 CC2607 Non COG 206 3e-53 SMb21292 [S] COG3748 Predicted membrane protein Sme Sinorhizobiu... 201 1e-51 SMb20848 [S] COG3748 Predicted membrane protein Sme Sinorhizobiu... 194 2e-49 >RSc2115 [S] COG3748 Predicted membrane protein Rso Ralstonia solanacearum Length = 414 Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 153/216 (70%), Positives = 182/216 (84%), Gaps = 3/216 (1%) Query: 1 MEAYILDWLNLLLRWLHVITAIAWIGSSFYFVWLDNSLVAPTDPELKEKGVGGELWAVHG 60 ME Y+LDW NLLLRWLHVITAIAWIGSSFYFVWLDNSL P+ P+L +KGV GELWAVHG Sbjct: 1 MEGYLLDWANLLLRWLHVITAIAWIGSSFYFVWLDNSLTRPSAPDLLDKGVDGELWAVHG 60 Query: 61 GGFYNPQKYLLAPKVLPEHLHWFYWESYSTWLSGFALFSLLYLFNANVFLVDRNVFDMSA 120 GGFY+PQKYLLAPK LPEHLHWFYWESYSTW+SGFAL +++YLFNANV+L+DR+VFDM+A Sbjct: 61 GGFYHPQKYLLAPKQLPEHLHWFYWESYSTWMSGFALLTVVYLFNANVYLIDRSVFDMTA 120 Query: 121 SMAGGAAIAFLIFNWLIYDAICSTIGDRPGADRLVNLLVGLQVVVSVWAACHLFSGRAAF 180 + A A+AFL WL+YD IC G +DRLV LV + VV++ +AACHLF+GRAAF Sbjct: 121 TTAVLLALAFLAVGWLVYDTICRVFGK---SDRLVGALVAVYVVIAAYAACHLFAGRAAF 177 Query: 181 LISGASLATIMSANVLVWIIPGQRKMVASMRAGQAP 216 L+ GA +ATIMSANV WIIPGQRK+VA+++AG+ P Sbjct: 178 LLIGAMIATIMSANVFFWIIPGQRKVVAALKAGEKP 213 >BMEI1572 [S] COG3748 Predicted membrane protein Bme Brucella melitensis Length = 417 Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 112/213 (52%), Positives = 142/213 (66%), Gaps = 5/213 (2%) Query: 7 DWLNLLLRWLHVITAIAWIGSSFYFVWLDNSLVAPTDPELKEKGVGGELWAVHGGGFYNP 66 DWL +RWLHV TAIAWIGSSFYF+ LD L P L E G GE W VHGGGFY Sbjct: 9 DWLGFAVRWLHVTTAIAWIGSSFYFIALDLGL--RQRPGLPE-GAYGEEWQVHGGGFYQI 65 Query: 67 QKYLLAPKVLPEHLHWFYWESYSTWLSGFALFSLLYLFNANVFLVDRNVFDMSASMAGGA 126 QKYL+AP +PEHL WF WESY+TWLSGF L ++Y A+++LVD NV D+S +A Sbjct: 66 QKYLVAPAQMPEHLTWFKWESYATWLSGFTLLCIVYYAGADLYLVDPNVLDVSVPVAIAI 125 Query: 127 AIAFLIFNWLIYDAICSTIGDRPGADRLVNLLVGLQVVVSVWAACHLFSGRAAFLISGAS 186 +IA L F W+ Y+ IC+ + R +D L+ +++ +VV W HLF+GRAAFL GA Sbjct: 126 SIASLAFGWIAYNTICNMMLGR--SDTLLMVILYCILVVMAWGYTHLFTGRAAFLHLGAF 183 Query: 187 LATIMSANVLVWIIPGQRKMVASMRAGQAPTNR 219 ATIMSANV + IIP Q+ +VA + AG+ P + Sbjct: 184 TATIMSANVFMIIIPNQKIVVADLIAGRKPDPK 216 >CC2607 Non COG Length = 395 Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 106/214 (49%), Positives = 140/214 (65%), Gaps = 5/214 (2%) Query: 1 MEAYILDWLNLLLRWLHVITAIAWIGSSFYFVWLDNSLVAPTDPELKEKGVGGELWAVHG 60 M+ W+ + LRWLHV+ +AWIG+SFYFVWLDN+L DP + GV GELWAVHG Sbjct: 1 MDYDFAGWIGMALRWLHVVAGVAWIGASFYFVWLDNNL---RDPNPPKDGVKGELWAVHG 57 Query: 61 GGFYNPQKYLLAPKVLPEHLHWFYWESYSTWLSGFALFSLLYLFNANVFLVDRNVFDMSA 120 GGFY+ QKYL AP +PEHLHWF WE+Y+TWLSGFAL +LY + A V+L+D S Sbjct: 58 GGFYHSQKYLNAPAHMPEHLHWFKWEAYTTWLSGFALLIVLYYWQAGVYLIDPAKHAFSQ 117 Query: 121 SMAGGAAIAFLIFNWLIYDAICSTIGDRPGADRLVNLLVGLQVVVSVWAACHLFSGRAAF 180 + A GA +AF+ L+Y+A+C + + G +L ++ + + WA LFS R AF Sbjct: 118 AQAIGAGMAFIFGGLLVYEALCRSPLGKSG--KLFGVVWFSILTAATWALTQLFSDRGAF 175 Query: 181 LISGASLATIMSANVLVWIIPGQRKMVASMRAGQ 214 + GA + T M NV + IIP QRK+VA+M AGQ Sbjct: 176 IHVGAIIGTCMVGNVFLVIIPNQRKIVAAMLAGQ 209 >SMb21292 [S] COG3748 Predicted membrane protein Sme Sinorhizobium meliloti Length = 412 Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 115/212 (54%), Positives = 141/212 (66%), Gaps = 9/212 (4%) Query: 7 DWLNLLLRWLHVITAIAWIGSSFYFVWLDNSLVA-PTDPELKEKGVGGELWAVHGGGFYN 65 DWL +RWLHVIT IAWIGSSFYFV LD L P P G GE W VHGGGFY+ Sbjct: 9 DWLTFAVRWLHVITGIAWIGSSFYFVALDLGLKQRPGMP----VGAYGEEWQVHGGGFYH 64 Query: 66 PQKYLLAPKVLPEHLHWFYWESYSTWLSGFALFSLLYLFNANVFLVDRNVFDMSASMAGG 125 QKYL+AP+ +PEHL WF WESY TWLSGF + +L+Y A+++L+D NV D+S MA Sbjct: 65 IQKYLVAPENMPEHLIWFKWESYVTWLSGFGMLALVYYAGADLYLIDPNVLDVSKPMAIA 124 Query: 126 AAIAFLIFNWLIYDAIC-STIGDRPGADRLVNLLVGLQVVVSVWAACHLFSGRAAFLISG 184 ++A L F WL YD IC S G+ RL+ LL + V+V+ W LF+GRAA+L G Sbjct: 125 ISLASLGFGWLAYDMICRSPFGND--NTRLMVLLYFILVIVA-WGYTQLFTGRAAYLHLG 181 Query: 185 ASLATIMSANVLVWIIPGQRKMVASMRAGQAP 216 A ATIMSANV IIP Q+K+VA + AG+ P Sbjct: 182 AFTATIMSANVFFIIIPNQKKVVADLIAGRTP 213 >SMb20848 [S] COG3748 Predicted membrane protein Sme Sinorhizobium meliloti Length = 410 Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 107/214 (50%), Positives = 140/214 (65%), Gaps = 7/214 (3%) Query: 7 DWLNLLLRWLHVITAIAWIGSSFYFVWLDNSLVAPTDPELKEKGVGGELWAVHGGGFYNP 66 +WL +RWLHV+TAIAWIGSSFYF+ LD LV + G GE W VHGGGFY+ Sbjct: 9 EWLAFAVRWLHVVTAIAWIGSSFYFIALDLGLV---KRDHLPPGAYGEEWQVHGGGFYHI 65 Query: 67 QKYLLAPKVLPEHLHWFYWESYSTWLSGFALFSLLYLFNANVFLVDRNVFDMSASMAGGA 126 KYL+AP +PEHL WF WESY+TWLSGFA+ ++Y A++FL+DR+V D+SA+ A Sbjct: 66 HKYLVAPAAMPEHLTWFKWESYATWLSGFAMLCIVYYGGADLFLIDRHVLDISATTAILI 125 Query: 127 AIAFLIFNWLIYDAIC-STIGDRPGADRLVNLLVGLQVVVSVWAACHLFSGRAAFLISGA 185 ++A L W++YD +C S IG + L+ L +V W +F+GRAAFL GA Sbjct: 126 SLASLGLGWVLYDLLCKSPIGKSTWG---LMALLYLVLVAMAWGYTQVFTGRAAFLHLGA 182 Query: 186 SLATIMSANVLVWIIPGQRKMVASMRAGQAPTNR 219 ATIMSANV + IIP Q+ +VA + AG+ P R Sbjct: 183 FTATIMSANVFLIIIPNQKIVVADLIAGRMPDPR 216