BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0085.p (212 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc1932 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 284 1e-76 PA2294 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 159 3e-39 mll1625 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 154 1e-37 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 153 2e-37 AGc4331 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 153 2e-37 >AGc1932 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 262 Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 131/210 (62%), Positives = 159/210 (75%) Query: 1 MKLATGLKQPNRGSVVIDGQTVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRR 60 MKL TGL P RG+V++ G+ VT P+ VGMAFQ PT+LPWRTTL+N+LLPLEIVE +RR Sbjct: 50 MKLVTGLHIPQRGNVIVAGRQVTEPVSIVGMAFQNPTMLPWRTTLENILLPLEIVEKHRR 109 Query: 61 DFKQKKAEYTERAKSLLKTVGLDGYADKFPWQLSGGMQQRASICRALIHEPKMLLLDEPF 120 + KA Y +A+ LL+ VGL G+ K+PWQLSGGMQQRA++CRALIHEP++L+LDEPF Sbjct: 110 RLRAHKASYVAKAERLLEIVGLKGFGSKYPWQLSGGMQQRANLCRALIHEPELLMLDEPF 169 Query: 121 GALDAFTREELWCVLRDLWAERRFNVILVTHDLREAAFLADTIYVMSKRPGRIVVRRENP 180 GALDAFTREELWCV+RDL A +R +ILVTHDLREA FLAD I+VMS RPGR++ P Sbjct: 170 GALDAFTREELWCVIRDLHAAQRVTIILVTHDLREATFLADKIFVMSARPGRVLAEHRVP 229 Query: 181 LPRPCPLETTYTDGFNALVHELREHIGHVR 210 RP L+ Y GFN +V EL I R Sbjct: 230 FARPRQLDIMYDKGFNDMVQELHGEIAQAR 259 >PA2294 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 284 Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 90/204 (44%), Positives = 117/204 (57%), Gaps = 7/204 (3%) Query: 5 TGLKQPNRGSVVIDGQTVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKQ 64 G +P+ GSV +DG++V GP GM FQ TL PWR DNV L++ R Sbjct: 61 AGHLRPSAGSVRVDGRSVEGPSPQRGMVFQQHTLFPWRRVRDNVAFGLKMQGLAR----- 115 Query: 65 KKAEYTERAKSLLKTVGLDGYADKFPWQLSGGMQQRASICRALIHEPKMLLLDEPFGALD 124 AE RA +L VGL +A ++P QLSGGMQQR I R L++ P++LL+DEPFGALD Sbjct: 116 --AERNRRAMEMLGLVGLADFAGRWPGQLSGGMQQRVEIARVLVNRPRLLLMDEPFGALD 173 Query: 125 AFTREELWCVLRDLWAERRFNVILVTHDLREAAFLADTIYVMSKRPGRIVVRRENPLPRP 184 A TR ++ +L D+WA R V+ VTHD+ EA +LAD + VMS RPGRI+ PRP Sbjct: 174 AQTRLKMQTLLLDVWARVRTTVLFVTHDIDEALYLADRVLVMSPRPGRIIADLALDFPRP 233 Query: 185 CPLETTYTDGFNALVHELREHIGH 208 + F L E + H Sbjct: 234 RDTRLVTSADFVRLKRHCLELLDH 257 >mll1625 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mlo Mesorhizobium loti Length = 263 Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 119/212 (56%), Gaps = 11/212 (5%) Query: 1 MKLATGLKQPNRGSVVIDGQT--VTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPY 58 +++ L++P G++ ++G T + G FQA L PWRT NV LPLEI+ Sbjct: 55 LRVIADLEKPTSGTISVNGMTPEQAREKRAYGYVFQAAALFPWRTIERNVGLPLEIM--- 111 Query: 59 RRDFKQKKAEYTERAKSLLKTVGLDGYADKFPWQLSGGMQQRASICRALIHEPKMLLLDE 118 KAE ER K L V L G+ K+PWQLSGGMQQRASI RAL + +LL+DE Sbjct: 112 ----GLSKAEQAERIKRTLDLVNLSGFEKKYPWQLSGGMQQRASIARALAFDADLLLMDE 167 Query: 119 PFGALDAFTREELWCVLRDLWAERRFNVILVTHDLREAAFLADTIYVMSKRPGRIVVRRE 178 PFGALD R+ L L LWA + VTH + EA +L+ I VMS RPGR+ E Sbjct: 168 PFGALDEIVRDHLNEQLLQLWARTNKTICFVTHSIPEAVYLSTRIVVMSPRPGRVSDIIE 227 Query: 179 NPLPRPCPLETTYTDGFNALVHELREHI--GH 208 + LP+ PL+ T F A+ +R+ + GH Sbjct: 228 STLPKERPLDIRETPEFLAIAARVRDGLRAGH 259 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/185 (43%), Positives = 115/185 (62%), Gaps = 9/185 (4%) Query: 1 MKLATGLKQPNRGSVVIDGQTVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRR 60 +++A GL+ G + ++G +TGP GM FQ +L PWRT +DN+ LE+ Sbjct: 66 LRIAAGLETLTSGEITLNGVPITGPDPKRGMVFQQYSLFPWRTVIDNITFGLEMQ----- 120 Query: 61 DFKQKKAEYTERAKSLLKTVGLDGYADKFPWQLSGGMQQRASICRALIHEPKMLLLDEPF 120 KK+E ++ + L+ VGL + + +P +LSGGMQQRA+I RAL +EP++LL+DEPF Sbjct: 121 --GIKKSEARKQVEKYLELVGLGQFKNSYPHELSGGMQQRAAIARALANEPEVLLMDEPF 178 Query: 121 GALDAFTREELWCVLRDLWAERRFNVILVTHDLREAAFLADTIYVMSKRPGRI--VVRRE 178 GALDA TR L L +W ++ + VTH + EA FL+D I VM+ RPGR+ +V E Sbjct: 179 GALDAQTRNVLQDELLKIWEQKHVTFLFVTHSVDEAVFLSDRIVVMTSRPGRVKEIVSVE 238 Query: 179 NPLPR 183 P PR Sbjct: 239 LPRPR 243 >AGc4331 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 264 Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 116/212 (54%), Gaps = 11/212 (5%) Query: 1 MKLATGLKQPNRGSVVIDGQTVTGPLK--FVGMAFQAPTLLPWRTTLDNVLLPLEIVEPY 58 +++ L++ G + ++G T K G FQA L PWR+ N+ LPLEI+ Sbjct: 56 LRVIADLEKHTSGEITVNGTTPENARKDRSYGYVFQAAALYPWRSIEKNIALPLEIM--- 112 Query: 59 RRDFKQKKAEYTERAKSLLKTVGLDGYADKFPWQLSGGMQQRASICRALIHEPKMLLLDE 118 KAE ER + V L G+ K+PWQLSGGMQQRASI RAL + +LL+DE Sbjct: 113 ----GYSKAEQRERIDRTMDLVNLTGFGKKYPWQLSGGMQQRASIARALAFDADLLLMDE 168 Query: 119 PFGALDAFTREELWCVLRDLWAERRFNVILVTHDLREAAFLADTIYVMSKRPGRIVVRRE 178 PFGALD R+ L L LW + VTH + EA +L+ I VMS RPGR+ E Sbjct: 169 PFGALDEIVRDHLNEQLLKLWDTTGKTICFVTHSIPEAVYLSTRIVVMSPRPGRVTDVIE 228 Query: 179 NPLPRPCPLETTYTDGFNALVHELREHI--GH 208 + LPR PLE T F A+ H +RE + GH Sbjct: 229 STLPRERPLEIRETPEFLAIAHRVREGLKAGH 260