BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0082.p         (63 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2173 [R] COG3845 ABC-type uncharacterized transport systems, ...    91   5e-19

>RSc2173 [R] COG3845 ABC-type uncharacterized transport systems, ATPase
           components Rso Ralstonia solanacearum
          Length = 508

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 46/53 (86%)

Query: 1   VLVISEELDELFALCDRLHVIAKGRLSPSTPIEQATREQVGVWMSGLWDEPAA 53
           +L++SEELDELFALCDRLHVIA GRLSPSTP     REQ+G+WMSG+WD+ AA
Sbjct: 445 ILIVSEELDELFALCDRLHVIANGRLSPSTPAHATDREQIGLWMSGMWDKTAA 497