BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0081.p (364 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2174 [R] COG4603 ABC-type uncharacterized transport system, p... 483 e-136 SMc00243 [R] COG4603 ABC-type uncharacterized transport system, ... 317 2e-86 mll0503 [R] COG4603 ABC-type uncharacterized transport system, p... 310 2e-84 PA0137 [R] COG4603 ABC-type uncharacterized transport system, pe... 300 4e-81 AGc3295 [R] COG4603 ABC-type uncharacterized transport system, p... 295 1e-79 >RSc2174 [R] COG4603 ABC-type uncharacterized transport system, permease component Rso Ralstonia solanacearum Length = 369 Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust. Identities = 239/361 (66%), Positives = 294/361 (81%) Query: 3 ERLSFPLRLELRGAPSRTMTYLSPVIAIVATLLLGALLFLALGKDPLAGLKVFLIDPFNG 62 RL+ P+ LELR PSR M Y SP+IA+ TL+ G LLF LGKDP+AG++VFLI+P Sbjct: 8 SRLALPVSLELRALPSRAMAYASPLIALALTLVFGLLLFALLGKDPVAGVRVFLIEPLAT 67 Query: 63 KRAISELLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGVS 122 KRAI E+LLK+VPL+LCALGL+VC+RA++WNIGAEGQ VG + + A ++ D P + Sbjct: 68 KRAIGEVLLKTVPLVLCALGLSVCYRANVWNIGAEGQLIVGGIFAAATIIHFDTPTPAIP 127 Query: 123 GGMGLVLMIVAGVIGGALWAAITAFLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDP 182 GG L+L +VAG+ GG LWA +TA LRD+F+ANEILVSLMLTY+AQLLL++ VNGPLKDP Sbjct: 128 GGAALLLAVVAGLAGGMLWAGLTALLRDRFHANEILVSLMLTYIAQLLLLYMVNGPLKDP 187 Query: 183 NGMNFPQSKVFSSEFMLPTLISGTRLHIGFAVAIVAAVLMAIFMMRSLRGFSLMVGGVAP 242 NGMNFPQS VF S F+LPTL++GTRLH+GF + A M +F+ RS G+ L VGG+AP Sbjct: 188 NGMNFPQSMVFDSAFVLPTLVAGTRLHVGFLFMLAMAAAMTLFVFRSFAGYRLQVGGLAP 247 Query: 243 HAARYAGFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGR 302 AARYAGFS+R+ALW +LL+SG AG+AGAFE+AGPIGQLLPS+SPGYGFAAI+VAF+GR Sbjct: 248 QAARYAGFSSRAALWTALLVSGGLAGIAGAFEVAGPIGQLLPSISPGYGFAAIVVAFVGR 307 Query: 303 LHPIGAILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDYRLAWNK 362 LHP+G +LG ++MSL Y+GGELAQSRLGLP+AITGVFQGMLLF LLACDTLI+YRL W Sbjct: 308 LHPLGTVLGAIVMSLFYIGGELAQSRLGLPAAITGVFQGMLLFFLLACDTLIEYRLRWRA 367 Query: 363 K 363 Sbjct: 368 H 368 >SMc00243 [R] COG4603 ABC-type uncharacterized transport system, permease component Sme Sinorhizobium meliloti Length = 364 Score = 317 bits (813), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 173/356 (48%), Positives = 242/356 (67%), Gaps = 6/356 (1%) Query: 9 LRLELRGAPSRTMTYLSPVIAIVATLLLGALLFLALGKDPLAGLKVFLIDPFNGKRAISE 68 + LE R S + LSP IA T++ G ++F LGK+P+ L F ++P + ++ E Sbjct: 3 IELEKRAKASTLFSILSPFIAFALTIVFGGVMFALLGKNPVTALYSFFVEPLSEVWSLHE 62 Query: 69 LLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGVSGGMGLV 128 L +K+ PLIL +GL+VCFR++ WNIGAEGQF +GA+ A L V + + L Sbjct: 63 LAIKAAPLILIGVGLSVCFRSNNWNIGAEGQFIMGAIAGSA----LPVLFYDWQSPLILP 118 Query: 129 LMIVAGVIGGALWAAITAFLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDPNGMNFP 188 LM++ G++GGAL+AAI AFL+ N NEIL SLML YVAQL L W V GP ++P GMNFP Sbjct: 119 LMMLLGMLGGALFAAIPAFLKAHMNTNEILTSLMLVYVAQLFLDWLVRGPWRNPQGMNFP 178 Query: 189 QSKVFSSEFMLPTLISGTRLHIGFAVAIVAAVLMAIFMMRSLRGFSLMVGGVAPHAARYA 248 +++ F ++ +LP +++ R H GFA AI+AAVL+ M +L+GF + V G + A R+A Sbjct: 179 ETRTFGADAILPEMLASGRTHWGFAFAIIAAVLVWFMMRYTLKGFEITVLGQSERAGRFA 238 Query: 249 GFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGRLHPIGA 308 GFS+R +W S+L SGA AGLAG E++G + QL P +SPGYGF AIIVAF+GRL+P+G Sbjct: 239 GFSSRRMIWFSMLFSGALAGLAGISEVSGAMQQLRPVISPGYGFTAIIVAFLGRLNPLGI 298 Query: 309 ILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDY--RLAWNK 362 + GL+++L YLGGE AQ +G+ +T VFQG+LLF +L+CD LI Y RL W++ Sbjct: 299 VAAGLVLALTYLGGEAAQLSIGVSEKVTRVFQGLLLFFVLSCDALIHYRIRLVWDR 354 >mll0503 [R] COG4603 ABC-type uncharacterized transport system, permease component Mlo Mesorhizobium loti Length = 375 Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 178/353 (50%), Positives = 236/353 (66%), Gaps = 7/353 (1%) Query: 9 LRLELRGAPSRTMTY--LSPVIAIVATLLLGALLFLALGKDPLAGLKVFLIDPFNGKRAI 66 +RLEL P R+ + LSP IA T++ GA+LF LG +PL +++ I+P + + Sbjct: 1 MRLELVKRPQRSALFSALSPFIAFALTIIAGAVLFALLGVNPLTAFRIYFIEPISQVWQL 60 Query: 67 SELLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGVSGGMG 126 EL +K+ PLIL A+GL+VC++A+IWNIGAEGQF GA+ A+ V G + Sbjct: 61 HELAIKAAPLILIAVGLSVCYKANIWNIGAEGQFIFGAIFGSAIPVLFP----QFEGPLV 116 Query: 127 LVLMIVAGVIGGALWAAITAFLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDPNGMN 186 L LM++ G++GGA +AAI AFL+ +FN NEIL SLML YVAQL L W V GP +DP G Sbjct: 117 LPLMLLLGMVGGAAYAAIPAFLKTRFNTNEILTSLMLVYVAQLFLDWLVRGPWRDPQGHG 176 Query: 187 FPQSKVFSSEFMLPTLI-SGTRLHIGFAVAIVAAVLMAIFMMRSLRGFSLMVGGVAPHAA 245 FPQ+ F +LP L+ R + GF A+VAAVL+ I M R L+GF + V G +P A Sbjct: 177 FPQTIQFGDSAVLPELMPDAGRANWGFVFALVAAVLIWILMGRMLKGFEVRVLGSSPRAG 236 Query: 246 RYAGFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGRLHP 305 R+AGF ++ + L+SGA AGLAG E++G IGQL P +SPGYGF AIIVAF+GRL+P Sbjct: 237 RFAGFGLSRMVFFAFLLSGALAGLAGISEVSGAIGQLQPVISPGYGFTAIIVAFLGRLNP 296 Query: 306 IGAILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDYRL 358 +G I GL+++L YLGGE QS LG+ + VFQGMLLF +L CDTLI YR+ Sbjct: 297 LGIIAAGLVLALTYLGGEAVQSALGISDKVARVFQGMLLFFVLGCDTLIHYRI 349 >PA0137 [R] COG4603 ABC-type uncharacterized transport system, permease component Pae Pseudomonas aeruginosa Length = 365 Score = 300 bits (768), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 177/359 (49%), Positives = 233/359 (64%), Gaps = 8/359 (2%) Query: 9 LRLELRGAPSRTMTYLSPVIAIVATLLLGALLFLALGKDPLAGLKVFLIDPFNGKRAISE 68 L LE RG SR M SP++A + TL+ GALLF LG DP L L+ P + + E Sbjct: 3 LSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQTLHTVLVQPLSDLYGLGE 62 Query: 69 LLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGVSGGMGLV 128 LL+K++P++LCALGLA+ ++A +WNIGAEGQ VGAL A+ + L L Sbjct: 63 LLVKAMPILLCALGLALAYQARVWNIGAEGQLLVGALAGSAVAIQL----LDWQSRWALA 118 Query: 129 LMIVAGVIGGALWAAITAFLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDPNGMNFP 188 +++AG GALWA A+LR +FNANEIL ++ML Y+A LL++ V+GPLKDP+G NFP Sbjct: 119 WVLLAGTAAGALWAGFAAWLRTRFNANEILTTIMLNYIALNLLLYGVHGPLKDPDGFNFP 178 Query: 189 QSKVFSSEFMLPTLISGTRLHIGFAVAIVAAVLMAIFMMRSLRGFSLMVGGVAPHAARYA 248 QS +F LP L +R+H+G ++A + + RS GF + V G+ AA + Sbjct: 179 QSALFGEASRLPALFEDSRVHLGALFGLLALAAVWVLAQRSFLGFQVRVLGLDRRAAGFV 238 Query: 249 GFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGRLHPIGA 308 GF + +W LL SGA AGLAG E+AGPIGQL+P VSPGYG+AAI VAF+GRL+P G Sbjct: 239 GFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVAFLGRLNPFGI 298 Query: 309 ILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDYRL----AWNKK 363 + L+M+LLYLGGE AQ L LP A++G+FQGM+LF LLACD LI YR W K+ Sbjct: 299 LCASLLMALLYLGGEAAQMSLNLPLALSGLFQGMMLFFLLACDVLILYRPRLHGRWRKR 357 >AGc3295 [R] COG4603 ABC-type uncharacterized transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 363 Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 181/350 (51%), Positives = 243/350 (69%), Gaps = 4/350 (1%) Query: 9 LRLELRGAPSRTMTYLSPVIAIVATLLLGALLFLALGKDPLAGLKVFLIDPFNGKRAISE 68 + LE R SR T LSP++A+V TLL+GA++F LGK+PL L F ++P ++ E Sbjct: 3 IELEKRAGVSRLFTLLSPLLALVLTLLVGAVMFAMLGKNPLDALYAFFVEPLLEVWSLHE 62 Query: 69 LLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGVSGGMGLV 128 L +K+ PLIL +GL++C+R++ WNIGAEGQFT+GA+ +G++L L H + L Sbjct: 63 LAIKAAPLILIGVGLSICYRSNNWNIGAEGQFTIGAI-TGSILPVLYPDWHS---PLILP 118 Query: 129 LMIVAGVIGGALWAAITAFLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDPNGMNFP 188 LM+V G IGGAL+A I A L+ +FN NEILVSLML YVAQL L W G +DP G NFP Sbjct: 119 LMMVMGAIGGALYAGIPALLKTKFNTNEILVSLMLVYVAQLFLDWLTRGIWRDPGGYNFP 178 Query: 189 QSKVFSSEFMLPTLISGTRLHIGFAVAIVAAVLMAIFMMRSLRGFSLMVGGVAPHAARYA 248 Q+K F+ +LP +++ R H GF AIVAA+ + M L+GF + V G + A R+A Sbjct: 179 QTKPFNDSAVLPEMLASGRAHWGFVFAIVAAIALWFMMRYMLKGFEVTVLGQSARAGRFA 238 Query: 249 GFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGRLHPIGA 308 GFS+ +W SLL+SGA AGLAG E +G IG L PS+SPGYGF AIIVAF+GRL+P+G Sbjct: 239 GFSSSRMVWFSLLLSGALAGLAGISEASGSIGHLQPSISPGYGFTAIIVAFLGRLNPLGI 298 Query: 309 ILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDYRL 358 IL GL+++L YLGGE AQ +G+ +T VFQG++LF +L+CDTLI YR+ Sbjct: 299 ILSGLVLALTYLGGEAAQLSIGVSDKVTRVFQGLMLFFVLSCDTLIFYRI 348