BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0072.p         (48 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC3325 [TK] COG0745 Response regulators consisting of a CheY-lik...    70   8e-13

>CC3325 [TK] COG0745 Response regulators consisting of a CheY-like receiver
           domain and a winged-helix DNA-binding domain Ccr
           Caulobacter vibrioides
          Length = 236

 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 40/48 (83%)

Query: 1   VWGAEPELPTRTIDTHVSRVRTKLGLQPGHGYRLATVYGYGYQLERLD 48
           +WG  P+L TRT+D HVSR+R+KL L+P +G+RL+TVYG+GY+LE  D
Sbjct: 181 IWGQRPDLETRTLDAHVSRLRSKLHLRPSNGFRLSTVYGFGYRLEACD 228