BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0092.p (494 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0708 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase... 790 0.0 NMA1952 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase... 758 0.0 NMB1694 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase... 752 0.0 PA5237 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase ... 750 0.0 YPO3769 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase... 731 0.0 >RSc0708 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Rso Ralstonia solanacearum Length = 503 Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/501 (75%), Positives = 437/501 (87%), Gaps = 9/501 (1%) Query: 1 MKYTDLRDFISQLQQKGELKRVSHPVSSHLEMTEICDRTLRAEGPALLFEH----VDQKN 56 M+Y DLRDF++QL++ GEL+R+ PVS LEMTE+CDR LRAEGPA++FE + Sbjct: 1 MQYRDLRDFLAQLERIGELRRIRVPVSPRLEMTEVCDRLLRAEGPAVVFERPADGAQTYD 60 Query: 57 IPVLANLFGTPHRVALGMGADNIGELRRIGHLLARLKEPEPPKGIKDVLDLGSLVKSLWD 116 +PVLANLFGTP RVALGMGA+++ ELR +G LL+ LKEPEPP+G+++ L ++ K++WD Sbjct: 61 MPVLANLFGTPRRVALGMGAESLDELRDVGRLLSALKEPEPPRGLREAGKLWTMAKAVWD 120 Query: 117 MAPKERGSAPCQDVVWEGKDVDLSRLPIQHCWPGDIAPLITWGLVVTKGPHKKRQNLGIY 176 MAP++ S CQ++V EG DVDLSR+P+Q CWPGD APL+TWGLVVT+GPHKKRQNLGIY Sbjct: 121 MAPRKVSSPACQEIVLEGDDVDLSRIPVQTCWPGDAAPLVTWGLVVTRGPHKKRQNLGIY 180 Query: 177 RQQVLGPNKVIMRWLAHRGGALDFREHCIANPGKPYPVVVALGADPATILGAVTPVPDNL 236 RQQV+ N+VIMRWLAHRGGALDFREH IA+PG+P+P+ VALGADPATILGAVTPVPD L Sbjct: 181 RQQVINRNQVIMRWLAHRGGALDFREHAIAHPGQPFPIAVALGADPATILGAVTPVPDTL 240 Query: 237 SEYQFAGLLRGSRTELVKAMG-----SELRVPASAEIVLEGHIYPDEKHASGFEHALEGP 291 SEYQFAGLLRGSRTEL + + ++L+VPA AEIVLEGHI PD H SG++HALEGP Sbjct: 241 SEYQFAGLLRGSRTELAQCLTPSLAQAQLQVPAGAEIVLEGHIQPDPAHPSGYQHALEGP 300 Query: 292 YGDHTGYYNEQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQ 351 +GDHTGYYNEQDWFPVFT++RITMRRD IYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQ Sbjct: 301 FGDHTGYYNEQDWFPVFTVERITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQ 360 Query: 352 FAEITDFYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNI 411 F EI DFYLPPEGCSYRMA+V MKK YAGHAKRVMFGVWSFLRQFMYTKFIVVVD+DV++ Sbjct: 361 FPEIADFYLPPEGCSYRMALVSMKKQYAGHAKRVMFGVWSFLRQFMYTKFIVVVDDDVDL 420 Query: 412 RDWKEVIWAITTRVDPVRDTVMVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETSREW 471 RDWKEVIWAITTRVDP RDTVMV+NTPIDYLDFASP+SGLGSKMGIDATNKWPGET+REW Sbjct: 421 RDWKEVIWAITTRVDPARDTVMVENTPIDYLDFASPVSGLGSKMGIDATNKWPGETTREW 480 Query: 472 GTPIVMGEDVKQRVDAIWQDL 492 G PIVM VK RVDA+W+ L Sbjct: 481 GQPIVMDAAVKSRVDAMWETL 501 >NMA1952 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases NmA Neisseria meningitidis Z2491 Length = 492 Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/499 (73%), Positives = 422/499 (84%), Gaps = 12/499 (2%) Query: 1 MKYTDLRDFISQLQQKGELKRVSHPVSSHLEMTEICDRTLRAEGPALLFEHV-----DQK 55 MKY DLRDFI+ L+Q+G+LKR++HPVS HLEMTEI DR LRAEGPALLFEH + Sbjct: 1 MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEGPALLFEHPVKPDGTRY 60 Query: 56 NIPVLANLFGTPHRVALGMGADNIGELRRIGHLLARLKEPEPPKGIKDVLDLGSLVKSLW 115 + PVLANLFGTP RVA+GMGAD++ +LR IG LA LKEPEPPKGIKD L+K +W Sbjct: 61 DYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEPPKGIKDAFSKLPLLKDIW 120 Query: 116 DMAPKERGSAPCQDVVWEGKDVDLSRLPIQHCWPGDIAPLITWGLVVTKGPHKKRQNLGI 175 MAP +APCQ++VWEG+DVDL +LPIQHCWP D+APL+TWGL VT+GPHKKRQNLGI Sbjct: 121 SMAPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPLVTWGLTVTRGPHKKRQNLGI 180 Query: 176 YRQQVLGPNKVIMRWLAHRGGALDFREHCIANPGKPYPVVVALGADPATILGAVTPVPDN 235 YRQQ++G NK+IMRWL+HRGGALD++E NP PYPV V LG DPATILGAVTPVPD Sbjct: 181 YRQQLIGINKLIMRWLSHRGGALDYQEFRKLNPDTPYPVAVVLGCDPATILGAVTPVPDT 240 Query: 236 LSEYQFAGLLRGSRTELVKAMGSELRVPASAEIVLEGHIYPDEKHASGFEHALEGPYGDH 295 LSEYQFAGLLRGSRTELVK +G++L+VPA AEIVLEG I+P+E ALEGPYGDH Sbjct: 241 LSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLEGVIHPNET-------ALEGPYGDH 293 Query: 296 TGYYNEQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEI 355 TGYYNEQD FPVFT++RITMR + IYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQF EI Sbjct: 294 TGYYNEQDHFPVFTVERITMRENPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEI 353 Query: 356 TDFYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWK 415 TDFYLPPEGCSYRMAVV MKK YAGHAKRVM G WSFLRQFMYTKFI+VVD+DV++RDWK Sbjct: 354 TDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLRQFMYTKFIIVVDDDVDVRDWK 413 Query: 416 EVIWAITTRVDPVRDTVMVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETSREWGTPI 475 EVIWA+TTR+DPVRDTV+++NTPIDYLDFASP+SGLG KMG+DATNKWPGET REWG I Sbjct: 414 EVIWAVTTRMDPVRDTVLMENTPIDYLDFASPVSGLGGKMGLDATNKWPGETDREWGRVI 473 Query: 476 VMGEDVKQRVDAIWQDLGI 494 V ++D IW++LG+ Sbjct: 474 KKDPAVTAKIDEIWEELGL 492 >NMB1694 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Nme Neisseria meningitidis MC58 Length = 494 Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/499 (73%), Positives = 423/499 (84%), Gaps = 12/499 (2%) Query: 1 MKYTDLRDFISQLQQKGELKRVSHPVSSHLEMTEICDRTLRAEGPALLFEHVDQKN---- 56 MKY DLRDFI+ L+Q+G+LKRV+HP+S +LEMTEI DR LRAEGPALLFE+ + + Sbjct: 3 MKYKDLRDFIAMLEQQGKLKRVAHPISPYLEMTEIADRVLRAEGPALLFENPIKPDGTRY 62 Query: 57 -IPVLANLFGTPHRVALGMGADNIGELRRIGHLLARLKEPEPPKGIKDVLDLGSLVKSLW 115 PVLANLFGTP RVA+GMGAD++ +LR IG LA LKEPEPPKGIKD L+K +W Sbjct: 63 GYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEPPKGIKDAFSKLPLLKDIW 122 Query: 116 DMAPKERGSAPCQDVVWEGKDVDLSRLPIQHCWPGDIAPLITWGLVVTKGPHKKRQNLGI 175 MAP +APCQ++VWEG+DVDL +LPIQHCWP D+APL+TWGL VT+GPHKKRQNLGI Sbjct: 123 SMAPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPLVTWGLTVTRGPHKKRQNLGI 182 Query: 176 YRQQVLGPNKVIMRWLAHRGGALDFREHCIANPGKPYPVVVALGADPATILGAVTPVPDN 235 YRQQ++G NK+IMRWL+HRGGALD++E NP PYPV V LG DPATILGAVTPVPD Sbjct: 183 YRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYPVAVVLGCDPATILGAVTPVPDT 242 Query: 236 LSEYQFAGLLRGSRTELVKAMGSELRVPASAEIVLEGHIYPDEKHASGFEHALEGPYGDH 295 LSEYQFAGLLRGSRTELVK +G++L+VPA AEIVLEG I+P+E ALEGPYGDH Sbjct: 243 LSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLEGVIHPNET-------ALEGPYGDH 295 Query: 296 TGYYNEQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEI 355 TGYYNEQD+FPVFT++RITMR + IYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQF EI Sbjct: 296 TGYYNEQDYFPVFTVERITMRENPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEI 355 Query: 356 TDFYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWK 415 TDFYLPPEGCSYRMAVV MKK YAGHAKRVM G WSFLRQFMYTKFI+VVD+DVN+RDWK Sbjct: 356 TDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLRQFMYTKFIIVVDDDVNVRDWK 415 Query: 416 EVIWAITTRVDPVRDTVMVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETSREWGTPI 475 EVIWA+TTR+DPVRDTV+V+NTPIDYLDFASP+SGLG KMG+DATNKWPGET REWG I Sbjct: 416 EVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLGGKMGLDATNKWPGETDREWGRVI 475 Query: 476 VMGEDVKQRVDAIWQDLGI 494 V ++D IW++LG+ Sbjct: 476 KKDPAVTAKIDGIWEELGL 494 >PA5237 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Pae Pseudomonas aeruginosa Length = 488 Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/494 (72%), Positives = 414/494 (83%), Gaps = 7/494 (1%) Query: 1 MKYTDLRDFISQLQQKGELKRVSHPVSSHLEMTEICDRTLRAEGPALLFEHVDQKNIPVL 60 M + DLRDFI+QL+Q+G LKR+ P+S LEMTE+CDRTLRA+GPALLFE ++PVL Sbjct: 1 MTFKDLRDFIAQLEQRGALKRIQVPISPVLEMTEVCDRTLRAKGPALLFEKPTGFDMPVL 60 Query: 61 ANLFGTPHRVALGMGADNIGELRRIGHLLARLKEPEPPKGIKDVLDLGSLVKSLWDMAPK 120 NLFGTP RVALGMGA+++G LR IG LLA+LKEPEPPKG+KD + + + MAPK Sbjct: 61 GNLFGTPERVALGMGAEDVGALREIGKLLAQLKEPEPPKGLKDAWAKLPMYRKVLSMAPK 120 Query: 121 ERGSAPCQDVVWEGKDVDLSRLPIQHCWPGDIAPLITWGLVVTKGPHKKRQNLGIYRQQV 180 APCQ+VV EG+DVDL RLP+Q CWPGD+ PLITWGL VT+GP+K+RQNLGIYRQQV Sbjct: 121 VLKDAPCQEVVEEGEDVDLGRLPVQTCWPGDVGPLITWGLTVTRGPNKERQNLGIYRQQV 180 Query: 181 LGPNKVIMRWLAHRGGALDFREHCIANPGKPYPVVVALGADPATILGAVTPVPDNLSEYQ 240 +G NKVIMRWL+HRGGALD+RE C +PG+PYPV VALGADPATILGAVTPVPD LSEY Sbjct: 181 IGRNKVIMRWLSHRGGALDYREWCQKHPGQPYPVAVALGADPATILGAVTPVPDTLSEYA 240 Query: 241 FAGLLRGSRTELVKAMGSELRVPASAEIVLEGHIYPDEKHASGFEHALEGPYGDHTGYYN 300 FAGLLRG RTELVK GS+L+VPASAEIVLEG I+P E A EGPYGDHTGYYN Sbjct: 241 FAGLLRGHRTELVKCRGSDLQVPASAEIVLEGVIHPG-------EMADEGPYGDHTGYYN 293 Query: 301 EQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITDFYL 360 E D FPVFT++R+T R+ IYHSTYTG+PPDEPA+LGVALNEVFVP+LQKQF EI DFYL Sbjct: 294 EVDRFPVFTVERVTRRQKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEIVDFYL 353 Query: 361 PPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWA 420 PPEGCSYRMAVV MKK Y GHAKRVM GVWSFLRQFMYTKF++V D+D++ RDW +VIWA Sbjct: 354 PPEGCSYRMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDIDARDWNDVIWA 413 Query: 421 ITTRVDPVRDTVMVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETSREWGTPIVMGED 480 ITTR+DP RDTVM+DNTPIDYLDFASP+SGLGSKMG+DAT+KWPGETSREWG IV E Sbjct: 414 ITTRMDPKRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETSREWGRAIVKDEA 473 Query: 481 VKQRVDAIWQDLGI 494 V +R+DA+W LGI Sbjct: 474 VTRRIDALWSSLGI 487 >YPO3769 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Ype Yersinia pestis Length = 498 Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/494 (69%), Positives = 409/494 (82%), Gaps = 7/494 (1%) Query: 1 MKYTDLRDFISQLQQKGELKRVSHPVSSHLEMTEICDRTLRAEGPALLFEHVDQKNIPVL 60 MKY DLRDF+S L+Q+GELKR+S P+ +LEMTEI DRTLRA GPALLFE+ ++PVL Sbjct: 4 MKYRDLRDFLSLLEQRGELKRISQPIDPYLEMTEIADRTLRAGGPALLFENPKGYSMPVL 63 Query: 61 ANLFGTPHRVALGMGADNIGELRRIGHLLARLKEPEPPKGIKDVLDLGSLVKSLWDMAPK 120 NLFGT RVA+GMG +++ LR +G LLA LKEP+PPKG +D+ D K + +M K Sbjct: 64 CNLFGTAKRVAMGMGQEDVSALRDVGKLLAFLKEPDPPKGFRDLFDKLPKFKQVLNMPTK 123 Query: 121 ERGSAPCQDVVWEGKDVDLSRLPIQHCWPGDIAPLITWGLVVTKGPHKKRQNLGIYRQQV 180 SAPCQ+ VW+G+DVDLSR+P+ HCWP D APL++WGL +T+GPHK+RQNLGIYRQQV Sbjct: 124 RLNSAPCQEQVWQGEDVDLSRIPVMHCWPEDAAPLVSWGLTITRGPHKERQNLGIYRQQV 183 Query: 181 LGPNKVIMRWLAHRGGALDFREHCIANPGKPYPVVVALGADPATILGAVTPVPDNLSEYQ 240 LG NK+IMRWL+HRGGALD++E C A+PG+ +PV VALGADPATIL AVTPVPD LSEY Sbjct: 184 LGKNKLIMRWLSHRGGALDYQEWCEAHPGERFPVAVALGADPATILAAVTPVPDTLSEYA 243 Query: 241 FAGLLRGSRTELVKAMGSELRVPASAEIVLEGHIYPDEKHASGFEHALEGPYGDHTGYYN 300 FAGLLRG +TE+VK + ++L VPASAEIVLEG+I + A EGPYGDHTGYYN Sbjct: 244 FAGLLRGHKTEVVKCLSNDLEVPASAEIVLEGYI-------EQGDMAPEGPYGDHTGYYN 296 Query: 301 EQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITDFYL 360 E D FPVFT+ IT R+DAIYHSTYTG+PPDEPAV+GVALNEVFVP+LQKQF EI DFYL Sbjct: 297 EIDNFPVFTVTHITQRQDAIYHSTYTGRPPDEPAVMGVALNEVFVPILQKQFPEIVDFYL 356 Query: 361 PPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWA 420 PPEGCSYR+AVV +KK YAGHAKRVM G+WSFLRQFMYTKF++V D+D+N RDW +VIWA Sbjct: 357 PPEGCSYRLAVVTIKKQYAGHAKRVMMGIWSFLRQFMYTKFVIVCDDDINARDWNDVIWA 416 Query: 421 ITTRVDPVRDTVMVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETSREWGTPIVMGED 480 ITTR+DP RDTV+++NTPIDYLDFASP+SGLGSKMG+DATNKWP ET REWG PI M ED Sbjct: 417 ITTRMDPSRDTVLIENTPIDYLDFASPVSGLGSKMGLDATNKWPAETPREWGRPIKMDED 476 Query: 481 VKQRVDAIWQDLGI 494 V+ R+DA+W +L I Sbjct: 477 VRARIDALWDELAI 490