BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0083.p (191 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2207 [R] COG0655 Multimeric flavodoxin WrbA Rso Ralstonia sol... 255 5e-68 AGl1309 [R] COG0655 Multimeric flavodoxin WrbA Atu Agrobacterium... 187 1e-47 XF1133 [R] COG0655 Multimeric flavodoxin WrbA Xfa Xylella fastid... 173 3e-43 RSc0633 [R] COG0655 Multimeric flavodoxin WrbA Rso Ralstonia sol... 166 3e-41 XF1733 [R] COG0655 Multimeric flavodoxin WrbA Xfa Xylella fastid... 166 3e-41 >RSc2207 [R] COG0655 Multimeric flavodoxin WrbA Rso Ralstonia solanacearum Length = 190 Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 122/191 (63%), Positives = 149/191 (78%), Gaps = 4/191 (2%) Query: 1 MTKVAIVYHSGYGHTKKQAEAVQAGAAGVAGANVELIAISAEGTITDAQWASLDAADAII 60 M +VA+VYHSGYGHTKKQAEAV AG AGA LI+++ + D WA L DAI+ Sbjct: 1 MARVAVVYHSGYGHTKKQAEAVFAGVQ-AAGAEAHLISVA---DVNDQTWALLAGVDAIV 56 Query: 61 FGSPTYMGTVSWQFKKFADASSKPWFSQKWKDKVGAAFTNSATMNGDKLSTLHYLFTLGM 120 FG+PTYMG VS FKKFADASSK WF+ +WKDK+ A FTNSA+MNGDK +++ YL+TL Sbjct: 57 FGAPTYMGGVSGDFKKFADASSKAWFTGQWKDKIAAGFTNSASMNGDKYASIQYLWTLSQ 116 Query: 121 QHSMIWVGTGLMPANSKAAQRNDINFVGSFSGLMAQSPSDSSPEEGPLPGDLETAKLFGA 180 QH MIWVGTG+MPA+SKAA RNDIN++G F G ++Q+PSD+SPEEGPLPGDLETA+LFG Sbjct: 117 QHGMIWVGTGMMPASSKAATRNDINYMGGFGGALSQAPSDASPEEGPLPGDLETARLFGE 176 Query: 181 RVVETAARFKK 191 RVV +F + Sbjct: 177 RVVAVTRQFVR 187 >AGl1309 [R] COG0655 Multimeric flavodoxin WrbA Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 193 Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/189 (58%), Positives = 136/189 (71%), Gaps = 7/189 (3%) Query: 2 TKVAIVYHSGYGHTKKQAEAVQAGAAGVAGANVELIAISAEGTITDAQWASLDAADAIIF 61 + +VYHSGYGHT + AEAV GA L AI AEG +++ WA+LDAADAIIF Sbjct: 7 SNTVVVYHSGYGHTHRMAEAVAEGAEAT------LHAIDAEGNLSEDGWAALDAADAIIF 60 Query: 62 GSPTYMGTVSWQFKKFADASSKPWFSQKWKDKVGAAFTNSATMNGDKLSTLHYLFTLGMQ 121 G+PTYMG SWQFKKFADASSKPWFS KW+DKV FTNSA++NGDKL+TL YL L Q Sbjct: 61 GTPTYMGGPSWQFKKFADASSKPWFSAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQ 120 Query: 122 HSMIWVGTGLMPANSKAAQRNDINFVGSFSGLMAQSPSDSSPEEGPLPGDLETAKLFGAR 181 H +WV G+ P+N K++ RND N +GS+ MAQS +D++PEE + GDLETA+L+GAR Sbjct: 121 HGGLWVSLGIKPSNLKSSVRNDANRMGSYIAPMAQSDADAAPEEMSV-GDLETARLYGAR 179 Query: 182 VVETAARFK 190 V A + K Sbjct: 180 VANVARQHK 188 >XF1133 [R] COG0655 Multimeric flavodoxin WrbA Xfa Xylella fastidiosa 9a5c Length = 189 Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 6/189 (3%) Query: 4 VAIVYHSGYGHTKKQAEAVQAGAAGVAGANVELIAISAEGTITDAQWASLDAADAIIFGS 63 ++IVY SGYGHT + A+AV AG + GA+V L+A+ A+G++ +W L+ +DAIIFGS Sbjct: 3 ISIVYDSGYGHTAQVAKAVAAGVQEIKGADVRLMAV-ADGSV---EWEILEKSDAIIFGS 58 Query: 64 PTYMGTVSWQFKKF-ADASSKPWFSQKWKDKVGAAFTNSATMNGDKLSTLHYLFTLGMQH 122 PTY G +S + K+F D++ + W QKW++K+ A FTNS +GDKL++L + QH Sbjct: 59 PTYNGLISAKLKQFFEDSTKQVWVPQKWRNKIAAGFTNSGAQHGDKLNSLMSMVLFAAQH 118 Query: 123 SMIWVGTGLMPA-NSKAAQRNDINFVGSFSGLMAQSPSDSSPEEGPLPGDLETAKLFGAR 181 MIWVG LMP NS ND+N +GS+ G+M Q+ +D +PE P DL+TA+ G R Sbjct: 119 GMIWVGLDLMPGNNSSTGSPNDLNRLGSWLGVMTQANNDEAPEIAPPASDLKTAQYLGRR 178 Query: 182 VVETAARFK 190 V ET RF+ Sbjct: 179 VAETVRRFQ 187 >RSc0633 [R] COG0655 Multimeric flavodoxin WrbA Rso Ralstonia solanacearum Length = 190 Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 90/187 (48%), Positives = 116/187 (62%), Gaps = 10/187 (5%) Query: 4 VAIVYHSGYGHTKKQAEAVQAGAAGVAGANVELIAISAEGTITDAQWASLDAADAIIFGS 63 V+I+Y SGYGHTKKQAEA+ G GA LIA++ + + W +L +DAIIFGS Sbjct: 3 VSIIYDSGYGHTKKQAEAIAEGVRQTPGAEAVLIALAND----EIDWEALAGSDAIIFGS 58 Query: 64 PTYMGTVSWQFKKF-ADASSKPWFSQKWKDKVGAAFTNSATMNGDKLSTLHYLFTLGMQH 122 PTY G+VS +FKKF D++ K W Q W++K+ A FTNS M+GDKL +L + QH Sbjct: 59 PTYNGSVSARFKKFMEDSTRKAWMPQLWRNKIAAGFTNSGAMHGDKLHSLVTMALFAAQH 118 Query: 123 SMIWVGTGLMPANSKAAQRNDINFVGSFSGLMAQSPSDSSPEEGPLPGDLETAKLFGARV 182 MIWVG L P + ND+N VG + G MAQS +D SPE P+ DL TA+ G RV Sbjct: 119 GMIWVGLDLFPGKTA----NDMNRVGGWLGAMAQS-NDESPELSPIASDLSTARHLGRRV 173 Query: 183 VETAARF 189 E +F Sbjct: 174 AEITRQF 180 >XF1733 [R] COG0655 Multimeric flavodoxin WrbA Xfa Xylella fastidiosa 9a5c Length = 192 Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%) Query: 4 VAIVYHSGYGHTKKQAEAVQAGAAGVAGANVELIAISAEGTITDAQWASLDAADAIIFGS 63 ++IVY SGYGHT++QA AV G A V GA +LI + +G + W++L+A+DAI+FGS Sbjct: 3 ISIVYDSGYGHTERQARAVAEGVAKVPGAQAKLITV-GQGEM---DWSALEASDAIVFGS 58 Query: 64 PTYMGTVSWQFKKFADASSKP-WFSQKWKDKVGAAFTNSATMNGDKLSTLHYLFTLGMQH 122 PTY G++S + K+F + S+K W QKW++K+ A FTNS +GDKL+TL + QH Sbjct: 59 PTYNGSLSAKLKQFFEDSTKAAWSEQKWRNKIAAGFTNSGAQHGDKLNTLIGMALFAAQH 118 Query: 123 SMIWVGTGLMPANSKA-AQRNDINFVGSFSGLMAQSPSDSSPEEGPLPGDLETAKLFGAR 181 MIWVG LMP NS + D+N G++ G MAQS D P+ P DL+TA G R Sbjct: 119 GMIWVGLDLMPGNSSSTGSVEDLNRHGAWLGAMAQSNMDEGPDVSPPASDLKTAAYLGQR 178 Query: 182 VVETAARFKK 191 V ET RF + Sbjct: 179 VAETTQRFAR 188