BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0076.p (383 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2200 [V] COG1132 ABC-type multidrug transport system, ATPase ... 423 e-118 msbA [V] COG1132 ABC-type multidrug transport system, ATPase and... 353 3e-97 ZmsbA [V] COG1132 ABC-type multidrug transport system, ATPase an... 353 3e-97 ECs0997 [V] COG1132 ABC-type multidrug transport system, ATPase ... 353 3e-97 STM0984 [V] COG1132 ABC-type multidrug transport system, ATPase ... 353 3e-97 >RSc2200 [V] COG1132 ABC-type multidrug transport system, ATPase and permease components Rso Ralstonia solanacearum Length = 592 Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/380 (56%), Positives = 277/380 (72%), Gaps = 3/380 (0%) Query: 4 VIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAFSSTVPITQLMTATAVAV 63 V+EE +V+K+ GG+ YE RFN LR Y MRM A P+TQ + A A++V Sbjct: 213 VVEEAAGGYKVVKLHGGEAYESRRFNAMTNRLRGYAMRMAVAGGLNQPVTQFLAALALSV 272 Query: 64 VIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRGMAAAEEVYKLIDKT 123 ++ +A++Q+ Q TVGGF F+ AML+L++PLK L ++N P+QRG+ AAE ++ LID Sbjct: 273 ILAIAMVQAQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPMQRGLTAAEFIFGLIDTP 332 Query: 124 TERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGETIAFVGMSGGGKSTL 183 E G RA G L F V F Y + AL +I+LHV+AGE +A VG SG GK+TL Sbjct: 333 IEPQDGGKHIDRARGDLRFEHVTFRYGPDGRAALDSIDLHVKAGEIVALVGPSGSGKTTL 392 Query: 184 VSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDDTLAANIAYG--DAH 241 V+L+P F+ +SG I LDG + +SLQ LR+QIA V+Q+ VLF+DT+AAN+AYG DA Sbjct: 393 VNLLPRFFEPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYGARDAS 452 Query: 242 P-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRVAIARAIYKDAPILI 300 D ARV A+EAA+L DVV LP+G+ T +GDNGS+LSGGQRQR+AIARA+YKDAPILI Sbjct: 453 EIDMARVRRALEAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRLAIARAVYKDAPILI 512 Query: 301 LDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIVVLAHGQIAEIGTHQ 360 LDEATSALD+ESER VQAAL+ LMQGRTT VIAHRLSTIE ADRIVVL HGQI E GTH+ Sbjct: 513 LDEATSALDSESERQVQAALEALMQGRTTLVIAHRLSTIENADRIVVLEHGQIVEAGTHR 572 Query: 361 ALLEQEGVYANLYRLQFSQQ 380 LL+++G+YA L+R+QF+ Q Sbjct: 573 ELLDRDGLYAGLHRIQFATQ 592 >msbA [V] COG1132 ABC-type multidrug transport system, ATPase and permease components Eco Escherichia coli K12 Length = 582 Score = 353 bits (907), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 185/379 (48%), Positives = 250/379 (65%), Gaps = 7/379 (1%) Query: 8 TTRAQQVIK------IFGGQDYEKERFNRRAENLRSYTMRMTAAFSSTVPITQLMTATAV 61 TT A+Q++K IFGGQ+ E +RF++ + +R M+M +A S + PI QL+ + A+ Sbjct: 204 TTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLAL 263 Query: 62 AVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRGMAAAEEVYKLID 121 A V+ A S +T G ++M+ L+ PLK L +N QRGMAA + ++ ++D Sbjct: 264 AFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILD 323 Query: 122 KTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGETIAFVGMSGGGKS 181 E+ G+ + RATG ++F V F YPG + AL+NINL + AG+T+A VG SG GKS Sbjct: 324 SEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKS 383 Query: 182 TLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDDTLAANIAYGDAH 241 T+ SLI FY GEI +DG D+ +L SLR Q+A+V+QN LF+DT+A NIAY Sbjct: 384 TIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTE 443 Query: 242 P-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRVAIARAIYKDAPILI 300 ++E A A+ D + + GL T +G+NG LSGGQRQR+AIARA+ +D+PILI Sbjct: 444 QYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILI 503 Query: 301 LDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIVVLAHGQIAEIGTHQ 360 LDEATSALDTESERA+QAALD L + RT+ VIAHRLSTIE+AD IVV+ G I E GTH Sbjct: 504 LDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHN 563 Query: 361 ALLEQEGVYANLYRLQFSQ 379 LLE GVYA L+++QF Q Sbjct: 564 DLLEHRGVYAQLHKMQFGQ 582 >ZmsbA [V] COG1132 ABC-type multidrug transport system, ATPase and permease components EcZ Escherichia coli O157:H7 EDL933 Length = 582 Score = 353 bits (907), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 185/379 (48%), Positives = 250/379 (65%), Gaps = 7/379 (1%) Query: 8 TTRAQQVIK------IFGGQDYEKERFNRRAENLRSYTMRMTAAFSSTVPITQLMTATAV 61 TT A+Q++K IFGGQ+ E +RF++ + +R M+M +A S + PI QL+ + A+ Sbjct: 204 TTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLAL 263 Query: 62 AVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRGMAAAEEVYKLID 121 A V+ A S +T G ++M+ L+ PLK L +N QRGMAA + ++ ++D Sbjct: 264 AFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILD 323 Query: 122 KTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGETIAFVGMSGGGKS 181 E+ G+ + RATG ++F V F YPG + AL+NINL + AG+T+A VG SG GKS Sbjct: 324 SEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKS 383 Query: 182 TLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDDTLAANIAYGDAH 241 T+ SLI FY GEI +DG D+ +L SLR Q+A+V+QN LF+DT+A NIAY Sbjct: 384 TIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTE 443 Query: 242 P-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRVAIARAIYKDAPILI 300 ++E A A+ D + + GL T +G+NG LSGGQRQR+AIARA+ +D+PILI Sbjct: 444 QYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILI 503 Query: 301 LDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIVVLAHGQIAEIGTHQ 360 LDEATSALDTESERA+QAALD L + RT+ VIAHRLSTIE+AD IVV+ G I E GTH Sbjct: 504 LDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHN 563 Query: 361 ALLEQEGVYANLYRLQFSQ 379 LLE GVYA L+++QF Q Sbjct: 564 DLLEHRGVYAQLHKMQFGQ 582 >ECs0997 [V] COG1132 ABC-type multidrug transport system, ATPase and permease components Ecs Escherichia coli O157:H7 Length = 582 Score = 353 bits (907), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 185/379 (48%), Positives = 250/379 (65%), Gaps = 7/379 (1%) Query: 8 TTRAQQVIK------IFGGQDYEKERFNRRAENLRSYTMRMTAAFSSTVPITQLMTATAV 61 TT A+Q++K IFGGQ+ E +RF++ + +R M+M +A S + PI QL+ + A+ Sbjct: 204 TTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLAL 263 Query: 62 AVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRGMAAAEEVYKLID 121 A V+ A S +T G ++M+ L+ PLK L +N QRGMAA + ++ ++D Sbjct: 264 AFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILD 323 Query: 122 KTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGETIAFVGMSGGGKS 181 E+ G+ + RATG ++F V F YPG + AL+NINL + AG+T+A VG SG GKS Sbjct: 324 SEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKS 383 Query: 182 TLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDDTLAANIAYGDAH 241 T+ SLI FY GEI +DG D+ +L SLR Q+A+V+QN LF+DT+A NIAY Sbjct: 384 TIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTE 443 Query: 242 P-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRVAIARAIYKDAPILI 300 ++E A A+ D + + GL T +G+NG LSGGQRQR+AIARA+ +D+PILI Sbjct: 444 QYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILI 503 Query: 301 LDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIVVLAHGQIAEIGTHQ 360 LDEATSALDTESERA+QAALD L + RT+ VIAHRLSTIE+AD IVV+ G I E GTH Sbjct: 504 LDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHN 563 Query: 361 ALLEQEGVYANLYRLQFSQ 379 LLE GVYA L+++QF Q Sbjct: 564 DLLEHRGVYAQLHKMQFGQ 582 >STM0984 [V] COG1132 ABC-type multidrug transport system, ATPase and permease components Sty Salmonella typhimurium LT2 Length = 582 Score = 353 bits (906), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 186/379 (49%), Positives = 249/379 (65%), Gaps = 7/379 (1%) Query: 8 TTRAQQVIK------IFGGQDYEKERFNRRAENLRSYTMRMTAAFSSTVPITQLMTATAV 61 TT A+Q++K IFGGQ+ E +RF++ + +R M+M +A S + PI QL+ + A+ Sbjct: 204 TTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLAL 263 Query: 62 AVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRGMAAAEEVYKLID 121 A V+ A S +T G ++M+ L+ PLK L +N QRGMAA + ++ ++D Sbjct: 264 AFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILD 323 Query: 122 KTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGETIAFVGMSGGGKS 181 E+ G+ + RATG L+F V F YPG E AL+NINL + AG+T+A VG SG GKS Sbjct: 324 SEQEKDEGKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKS 383 Query: 182 TLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDDTLAANIAYGDAH 241 T+ SLI FY G I +DG D+ +L SLR Q+A+V+QN LF+DT+A NIAY Sbjct: 384 TIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTE 443 Query: 242 P-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRVAIARAIYKDAPILI 300 ++E A A+ D + + GL T +G+NG LSGGQRQR+AIARA+ +D+PILI Sbjct: 444 EYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILI 503 Query: 301 LDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIVVLAHGQIAEIGTHQ 360 LDEATSALDTESERA+QAALD L + RT+ VIAHRLSTIE+AD IVV+ G I E GTH Sbjct: 504 LDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHS 563 Query: 361 ALLEQEGVYANLYRLQFSQ 379 LL Q GVYA L+++QF Q Sbjct: 564 ELLAQHGVYAQLHKMQFGQ 582