BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0008.p         (77 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PSLT054 [L] COG0389 Nucleotidyltransferase/DNA polymerase involv...    90   9e-19
ZumuC [L] COG0389 Nucleotidyltransferase/DNA polymerase involved...    87   7e-18
ECs1679 [L] COG0389 Nucleotidyltransferase/DNA polymerase involv...    87   7e-18
umuC [L] COG0389 Nucleotidyltransferase/DNA polymerase involved ...    87   1e-17
STM1997 [L] COG0389 Nucleotidyltransferase/DNA polymerase involv...    77   9e-15

>PSLT054 [L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA
          repair Sty Salmonella typhimurium LT2
          Length = 424

 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 44/57 (77%)

Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWFMM 70
          FAL DVN+FY SCE+VF P LR R VVVLSNNDGC +A S EAK LGIKM  PWF +
Sbjct: 2  FALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIARSAEAKKLGIKMGVPWFQL 58


>ZumuC [L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA
          repair EcZ Escherichia coli O157:H7 EDL933
          Length = 422

 Score = 87.4 bits (215), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 43/55 (78%)

Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWF 68
          FAL DVN FY SCE VF P+L  +PVVVLSNNDGC +A + EAKALG+KM  PWF
Sbjct: 2  FALCDVNAFYASCETVFRPELWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWF 56


>ECs1679 [L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA
          repair Ecs Escherichia coli O157:H7
          Length = 422

 Score = 87.4 bits (215), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 43/55 (78%)

Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWF 68
          FAL DVN FY SCE VF P+L  +PVVVLSNNDGC +A + EAKALG+KM  PWF
Sbjct: 2  FALCDVNAFYASCETVFRPELWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWF 56


>umuC [L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA
          repair Eco Escherichia coli K12
          Length = 422

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 42/55 (76%)

Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWF 68
          FAL DVN FY SCE VF P L  +PVVVLSNNDGC +A + EAKALG+KM  PWF
Sbjct: 2  FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWF 56


>STM1997 [L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA
          repair Sty Salmonella typhimurium LT2
          Length = 422

 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 40/55 (72%)

Query: 14 FALVDVNNFYVSCERVFDPKLRARPVVVLSNNDGCAVAHSNEAKALGIKMAAPWF 68
          FAL DVN+FY SCE VF P L  RPVVVLSNNDGC +A S EAK LGI    P+F
Sbjct: 2  FALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYF 56