BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0011.p         (161 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM4357 [R] COG0802 Predicted ATPase or kinase Sty Salmonella ty...   149   2e-36
yjeE [R] COG0802 Predicted ATPase or kinase Eco Escherichia coli...   147   1e-35
ZyjeE [R] COG0802 Predicted ATPase or kinase EcZ Escherichia col...   147   1e-35
ECs5144 [R] COG0802 Predicted ATPase or kinase Ecs Escherichia c...   147   1e-35
HI0065 [R] COG0802 Predicted ATPase or kinase Hin Haemophilus in...   146   2e-35

>STM4357 [R] COG0802 Predicted ATPase or kinase Sty Salmonella typhimurium
           LT2
          Length = 153

 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 95/155 (61%), Gaps = 4/155 (2%)

Query: 1   MQAHHLHLPDEAATAHLGADLARVLAPGLAIYLHGDLGAGKTALTRALLHAAGYQGRVKS 60
           M    + LPDE AT  LG  +A        IYL+GDLGAGKT  +R  L A G+ G VKS
Sbjct: 1   MMNRVIPLPDEQATLDLGQRVANACDGATVIYLYGDLGAGKTTFSRGFLQALGHNGNVKS 60

Query: 61  PTYTLAEPYEVMLAGRMVTVIHFDLYRMASPEEFLDAGFREHFNENAVCIVEWPEKGDPV 120
           PTYTL EPY +      + V HFDLYR+A PEE    G R++F  +A+C+VEWP++G  V
Sbjct: 61  PTYTLVEPYAI----DNMMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGKGV 116

Query: 121 LPPPDIHVNLTLAGDGRDVELRALSDKGHQCLARL 155
           LP PD+ +++     GR+  + A+S  GH  LARL
Sbjct: 117 LPDPDVEIHIDYQAQGREARVSAVSSSGHSLLARL 151


>yjeE [R] COG0802 Predicted ATPase or kinase Eco Escherichia coli K12
          Length = 153

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 4/155 (2%)

Query: 1   MQAHHLHLPDEAATAHLGADLARVLAPGLAIYLHGDLGAGKTALTRALLHAAGYQGRVKS 60
           M    + LPDE AT  LG  +A+       IYL+GDLGAGKT  +R  L A G+QG VKS
Sbjct: 1   MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQGNVKS 60

Query: 61  PTYTLAEPYEVMLAGRMVTVIHFDLYRMASPEEFLDAGFREHFNENAVCIVEWPEKGDPV 120
           PTYTL EPY +      + V HFDLYR+A PEE    G R++F  +A+C+VEWP++G  V
Sbjct: 61  PTYTLVEPYTL----DNLMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGTGV 116

Query: 121 LPPPDIHVNLTLAGDGRDVELRALSDKGHQCLARL 155
           LP PD+ +++     GR+  + A+S  G   LARL
Sbjct: 117 LPDPDVEIHIDYQAQGREARVSAVSSAGELLLARL 151


>ZyjeE [R] COG0802 Predicted ATPase or kinase EcZ Escherichia coli O157:H7
           EDL933
          Length = 153

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 4/155 (2%)

Query: 1   MQAHHLHLPDEAATAHLGADLARVLAPGLAIYLHGDLGAGKTALTRALLHAAGYQGRVKS 60
           M    + LPDE AT  LG  +A+       IYL+GDLGAGKT  +R  L A G+QG VKS
Sbjct: 1   MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQGNVKS 60

Query: 61  PTYTLAEPYEVMLAGRMVTVIHFDLYRMASPEEFLDAGFREHFNENAVCIVEWPEKGDPV 120
           PTYTL EPY +      + V HFDLYR+A PEE    G R++F  +A+C+VEWP++G  V
Sbjct: 61  PTYTLVEPYTL----DNLMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGTGV 116

Query: 121 LPPPDIHVNLTLAGDGRDVELRALSDKGHQCLARL 155
           LP PD+ +++     GR+  + A+S  G   LARL
Sbjct: 117 LPDPDVEIHIDYQAQGREARVSAVSSAGELLLARL 151


>ECs5144 [R] COG0802 Predicted ATPase or kinase Ecs Escherichia coli O157:H7
          Length = 153

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 4/155 (2%)

Query: 1   MQAHHLHLPDEAATAHLGADLARVLAPGLAIYLHGDLGAGKTALTRALLHAAGYQGRVKS 60
           M    + LPDE AT  LG  +A+       IYL+GDLGAGKT  +R  L A G+QG VKS
Sbjct: 1   MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQGNVKS 60

Query: 61  PTYTLAEPYEVMLAGRMVTVIHFDLYRMASPEEFLDAGFREHFNENAVCIVEWPEKGDPV 120
           PTYTL EPY +      + V HFDLYR+A PEE    G R++F  +A+C+VEWP++G  V
Sbjct: 61  PTYTLVEPYTL----DNLMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGTGV 116

Query: 121 LPPPDIHVNLTLAGDGRDVELRALSDKGHQCLARL 155
           LP PD+ +++     GR+  + A+S  G   LARL
Sbjct: 117 LPDPDVEIHIDYQAQGREARVSAVSSAGELLLARL 151


>HI0065 [R] COG0802 Predicted ATPase or kinase Hin Haemophilus influenzae
          Length = 158

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 9/158 (5%)

Query: 1   MQAHHLHLPDEAATAHLGADLARVL-----APGLAIYLHGDLGAGKTALTRALLHAAGYQ 55
           M++   ++PDE +    G   A +L        + +YL+GDLGAGKT LTR +L   G+Q
Sbjct: 1   MESLTQYIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60

Query: 56  GRVKSPTYTLAEPYEVMLAGRMVTVIHFDLYRMASPEEFLDAGFREHFNENAVCIVEWPE 115
           G VKSPTYTL E Y +  AG+M+   HFDLYR+A PEE    G R++FN +++C++EW E
Sbjct: 61  GNVKSPTYTLVEEYNI--AGKMI--YHFDLYRLADPEELEFMGIRDYFNTDSICLIEWSE 116

Query: 116 KGDPVLPPPDIHVNLTLAGDGRDVELRALSDKGHQCLA 153
           KG  +LP  DI VN+    D R++EL A ++ G   ++
Sbjct: 117 KGQGILPEADILVNIDYYDDARNIELIAQTNLGKNIIS 154