BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0126.p (355 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1794 [E] COG3842 ABC-type spermidine/putrescine transport sys... 341 2e-93 PH0022 [G] COG3839 ABC-type sugar transport systems, ATPase comp... 271 2e-72 PAB0545 [G] COG3839 ABC-type sugar transport systems, ATPase com... 267 3e-71 FN0310 [G] COG3839 ABC-type sugar transport systems, ATPase comp... 266 4e-71 AGl2655 [P] COG1118 ABC-type sulfate/molybdate transport systems... 265 2e-70 >RSc1794 [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components Rso Ralstonia solanacearum Length = 359 Score = 341 bits (874), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 187/325 (57%), Positives = 230/325 (70%), Gaps = 26/325 (8%) Query: 4 HQEAVSIRLSQCAKSFANGTRALQPLDLQIHPGETLVLLGPSGCGKTTTLRMIAGLEFPD 63 H V IRL C K F G R L PLDL I GETLVLLGPSGCGKTTTLR++AGLE PD Sbjct: 11 HLAPVPIRLRGCGKHF-GGQRVLDPLDLDIGAGETLVLLGPSGCGKTTTLRIVAGLEAPD 69 Query: 64 EGGRVLFGEEDVTMLPIEKRGVGMVFQNYALFPNMSVGENIAYGMKIRK----IAAGERA 119 GG V FG+E+VT PIE+R VGMVFQNYALFPN+ V N+ YG++I++ ++ + Sbjct: 70 AGGSVRFGDEEVTAHPIERRRVGMVFQNYALFPNLGVRGNVEYGLRIQRRRNRLSDAQIR 129 Query: 120 ERVERLLEMVHLQGLSHRRVDQLSGGQKQRVALARALAMEPRVLLLDEPLTALDAKLREA 179 R + LL+M+HL + R + QLSGGQ+QRVALARALA EPRVLLLDEPLTALDAKLRE+ Sbjct: 130 ARADALLDMMHLTPYAERAIGQLSGGQRQRVALARALAPEPRVLLLDEPLTALDAKLRES 189 Query: 180 VRSDLNKLLRSLGITAIYVTHDQGEAMALGDRIVVMERGKISQIGTPQEIYYHPANDFVA 239 VR+++++LLR LGIT +YVTHDQ EAMAL DRIVVM+ G+I+QIGTP+EIY+ PAN VA Sbjct: 190 VRAEMDRLLRGLGITTVYVTHDQEEAMALADRIVVMDAGRIAQIGTPREIYFQPANRHVA 249 Query: 240 EFIGAMNRVDG-------IVAGDRLQLPTGTLPLPPDAVAGQPAQAL-FRPEDVEVIDIT 291 +FIG MNR+DG + AG R+ +P G G A AL FRPED + D Sbjct: 250 DFIGIMNRLDGERQGGAFVCAGGRVAVPAG----------GGAADALFFRPEDAVLADPA 299 Query: 292 EADAHCLRGKLINTFFLGDRTRFEI 316 +A L+G + + FLG RTR + Sbjct: 300 QA---ALKGVVESAVFLGFRTRVRV 321 >PH0022 [G] COG3839 ABC-type sugar transport systems, ATPase components Pho Pyrococcus horikoshii Length = 373 Score = 271 bits (693), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 161/330 (48%), Positives = 214/330 (64%), Gaps = 18/330 (5%) Query: 6 EAVSIRLSQCAKSFANGTRALQPLDLQIHPGETLVLLGPSGCGKTTTLRMIAGLEFPDEG 65 + V ++L K F N T A+ L+L I GE LVLLGPSGCGKTTTLRMIAGLE P EG Sbjct: 9 KMVEVKLENLTKRFGNFT-AVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEG 67 Query: 66 GRVLFGEEDVTMLPIEKRGVGMVFQNYALFPNMSVGENIAYGMKIRKIAAGERAERVERL 125 R+ FG+ DVT LP + R + MVFQ+YA++P+M+V ENIA+ +KI+K E +RV Sbjct: 68 -RIYFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWA 126 Query: 126 LEMVHLQGLSHRRVDQLSGGQKQRVALARALAMEPRVLLLDEPLTALDAKLREAVRSDLN 185 E++ ++ L +R QLSGGQ+QRVA+ARA+ +EP VLL+DEPL+ LDAKLR A+R+++ Sbjct: 127 AELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIK 186 Query: 186 KLLRSLGITAIYVTHDQGEAMALGDRIVVMERGKISQIGTPQEIYYHPANDFVAEFIGA- 244 KL + L +T IYVTHDQ EAM +GDRI VM RG++ QIG+P E+Y P + FVA FIGA Sbjct: 187 KLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAP 246 Query: 245 -MNRV-----DGIVAGD--RLQLPTGTLPLPPDAVAGQPAQALFRPEDVEVIDITEADAH 296 MN + DG + G R++LP + L D V G+ RPE + V ++E AH Sbjct: 247 EMNILEVSVGDGYLEGRGFRIELPQDLMDLLKDYV-GKTVLFGIRPEHMTVEGVSEL-AH 304 Query: 297 CLR-----GKLINTFFLGDRTRFEIEIGAE 321 R GK+ LG T ++ G E Sbjct: 305 MKRTARLIGKVDFVEALGTDTILHVKFGDE 334 >PAB0545 [G] COG3839 ABC-type sugar transport systems, ATPase components Pab Pyrococcus abyssi Length = 329 Score = 267 bits (683), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/307 (47%), Positives = 202/307 (65%), Gaps = 22/307 (7%) Query: 29 LDLQIHPGETLVLLGPSGCGKTTTLRMIAGLEFPDEGGRVLFGEEDVTMLPIEKRGVGMV 88 +DL++ GE + +LGPSGCGKTTTLR+IAGLE PD+G VLF DVT LP R +G V Sbjct: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN-VLFDGRDVTFLPPYSRNIGFV 78 Query: 89 FQNYALFPNMSVGENIAYGMKIRKIAAGERAERVERLLEMVHLQGLSHRRVDQLSGGQKQ 148 FQ+YALFP+M+V +N+A+G+++RK+ E +V +LE+V L+G +R +QLSGGQ+Q Sbjct: 79 FQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQ 138 Query: 149 RVALARALAMEPRVLLLDEPLTALDAKLREAVRSDLNKLLRSLGITAIYVTHDQGEAMAL 208 RVALARAL +EP VLLLDEPL+ LDAK+RE++R ++ ++ + LGIT +YVTHDQ EAMA+ Sbjct: 139 RVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAI 198 Query: 209 GDRIVVMERGKISQIGTPQEIYYHPANDFVAEFIGAMN-----RVDGIVAGDRLQLPTGT 263 DRI VM G+I Q+G P E+YY+P +FVA+F+G N +G+ L G Sbjct: 199 SDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVG- 257 Query: 264 LPLPPDAVAGQPAQALFRPEDVEVIDITEADAHCLRGKLINTFFLGDRTRFEIEIGAERP 323 V G P + FRPE VE+ + ++++ L R RF + + + Sbjct: 258 -------VDG-PVKVFFRPESVEI------GKEGVEAEVMDYEILPGRIRFRLSVQG-KE 302 Query: 324 VIAETSL 330 +IAE SL Sbjct: 303 IIAEDSL 309 >FN0310 [G] COG3839 ABC-type sugar transport systems, ATPase components Fnu Fusobacterium nucleatum Length = 356 Score = 266 bits (681), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 143/317 (45%), Positives = 206/317 (64%), Gaps = 14/317 (4%) Query: 9 SIRLSQCAKSFANGTRALQPLDLQIHPGETLVLLGPSGCGKTTTLRMIAGLEFPDEGGRV 68 S+ ++ KSF N T LQ + + GE + LLGPSGCGKTT LR+IAG E P G + Sbjct: 3 SVTITGVTKSFGNVT-VLQEFNQKFEDGEFITLLGPSGCGKTTMLRLIAGFEKPS-SGEI 60 Query: 69 LFGEEDVT----MLPIEKRGVGMVFQNYALFPNMSVGENIAYGMKIRKIAAGERAERVER 124 G++ V+ LP EKRG+GMVFQ+YA++P+M+V +NIAY +KI+KI+ E ERV + Sbjct: 61 YIGDKLVSSEKEFLPPEKRGIGMVFQSYAVWPHMNVFDNIAYPLKIQKISKNEIEERVNQ 120 Query: 125 LLEMVHLQGLSHRRVDQLSGGQKQRVALARALAMEPRVLLLDEPLTALDAKLREAVRSDL 184 +L++VHL+ R +LSGGQ+QRVAL RAL +P +LLLDEPL+ LDAKLRE +R ++ Sbjct: 121 VLKIVHLEQYKDRFPSELSGGQQQRVALGRALVAQPEILLLDEPLSNLDAKLREEMRYEI 180 Query: 185 NKLLRSLGITAIYVTHDQGEAMALGDRIVVMERGKISQIGTPQEIYYHPANDFVAEFIGA 244 ++ + L IT IYVTHDQ EAM + +RIV++ +G++ Q+ PQEIY P N FVA F+G Sbjct: 181 KEITKKLKITVIYVTHDQIEAMTMSNRIVLINKGEVQQVAPPQEIYSKPKNMFVANFVGK 240 Query: 245 MNRVDGIVAGDRLQLPTGTLPLPPD--AVAGQPAQALFRPEDVEVIDITEADAHCLRGKL 302 ++ + G V G ++ L + + + G+ A+ RPE+ + D E + GK+ Sbjct: 241 VDFITGKVEGSKILLDNSNNQILSNTSSFKGKVVVAI-RPENAILSDDGE-----ITGKV 294 Query: 303 INTFFLGDRTRFEIEIG 319 + F+LGD +EIG Sbjct: 295 YSKFYLGDCNDLRVEIG 311 >AGl2655 [P] COG1118 ABC-type sulfate/molybdate transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 341 Score = 265 bits (676), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 144/289 (49%), Positives = 194/289 (67%), Gaps = 7/289 (2%) Query: 8 VSIRLSQCAKSFANGTRALQPLDLQIHPGETLVLLGPSGCGKTTTLRMIAGLEFPDEGGR 67 + IRL K+F + RA++ + L I GE L LLGPSG GKTT LRM+AGLE+ D GGR Sbjct: 1 MKIRLENVVKTF-DTFRAVRDVSLDIESGELLALLGPSGSGKTTILRMVAGLEYSD-GGR 58 Query: 68 VLFGEEDVTMLPIEKRGVGMVFQNYALFPNMSVGENIAYGMKIRKIAAGERA--ERVERL 125 + FG+ED T +P+ RGVG VFQ+YALFP+M++ ENIA+GMK+ K+ + A RV+ L Sbjct: 59 IFFGDEDATNIPVRDRGVGFVFQHYALFPHMTLHENIAFGMKVSKVKRDKAAIDARVKEL 118 Query: 126 LEMVHLQGLSHRRVDQLSGGQKQRVALARALAMEPRVLLLDEPLTALDAKLREAVRSDLN 185 L +V L GL R Q+SGGQ+QRVALARAL+++P+VLLLDEP ALDA +R +R L Sbjct: 119 LNLVKLDGLGDRFPAQISGGQRQRVALARALSVDPKVLLLDEPFGALDANVRRDLRRWLR 178 Query: 186 KLLRSLGITAIYVTHDQGEAMALGDRIVVMERGKISQIGTPQEIYYHPANDFVAEFIGAM 245 ++ SLGIT I+VTHDQ EA+ L DR+V++ +G I Q GTP+E+ P + FV F+G Sbjct: 179 EIHDSLGITTIFVTHDQEEALDLADRVVILNQGGIVQQGTPKEVCRQPNSSFVMRFLGDA 238 Query: 246 NRVDGIVAGDRLQLPTGTLPLPPDAVAGQPAQALF-RPEDVEVIDITEA 293 NRV G+ G ++ + G LP G A ++ RP D+E D+ E Sbjct: 239 NRVSGVARGGKVYV--GENELPFSYTQGDGAVDIYARPGDLEWEDLHEG 285