BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0049.p (193 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2910 [S] COG1971 Predicted membrane protein Pae Pseudomonas ae... 228 4e-60 yebN [S] COG1971 Predicted membrane protein Eco Escherichia coli... 210 2e-54 STM1834 [S] COG1971 Predicted membrane protein Sty Salmonella ty... 210 2e-54 ECs2531 [S] COG1971 Predicted membrane protein Ecs Escherichia c... 210 2e-54 Z2864 [S] COG1971 Predicted membrane protein EcZ Escherichia col... 209 3e-54 >PA2910 [S] COG1971 Predicted membrane protein Pae Pseudomonas aeruginosa Length = 189 Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 119/191 (62%), Positives = 148/191 (77%), Gaps = 2/191 (1%) Query: 1 MNFPALVLLALAMSTDAFAAAIGKGAAMQKPRFLQALRIGLLFGVIEAITPLIGWFAGSV 60 MN +L+ LA AMSTDAFAAAIGKG+++ +PR +ALR G++FGVIEAITPL+GW G Sbjct: 1 MNPVSLIFLAFAMSTDAFAAAIGKGSSLDRPRLSEALRTGIIFGVIEAITPLVGWLLGQA 60 Query: 61 ATKWVSQWDHWIAFTLLLVLGVRMIREGMSDDDEDEDASAAPQKQSVVMLALTAVATSID 120 A+++V+ WDHWIAF LL++LG+ MI G+ D E P + S +LA+TA+ATSID Sbjct: 61 ASQFVADWDHWIAFVLLVLLGLHMIHNGLRADHATEQEK--PGQHSFWILAVTALATSID 118 Query: 121 AMAVGVGLAFIDVNILEAALLIGLATTTMVTIGVMVGRVLGHLIGKRAEIIGGVVLIGVG 180 A+AVGVGLAF+DVNI AA IGLAT TMVT+G M+GR LG + GKRAE++GGVVLI VG Sbjct: 119 ALAVGVGLAFVDVNIFLAAGAIGLATMTMVTLGTMLGRALGAVTGKRAEMVGGVVLILVG 178 Query: 181 AAILYEHLSRA 191 A ILYEHLS A Sbjct: 179 ATILYEHLSAA 189 >yebN [S] COG1971 Predicted membrane protein Eco Escherichia coli K12 Length = 206 Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 109/190 (57%), Positives = 140/190 (73%), Gaps = 4/190 (2%) Query: 1 MNFPALVLLALAMSTDAFAAAIGKGAAMQKPRFLQALRIGLLFGVIEAITPLIGWFAGSV 60 MN A VLLA MS DAFAA+IGKGA + KP+F +ALR GL+FG +E +TPLIGW G + Sbjct: 19 MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGML 78 Query: 61 ATKWVSQWDHWIAFTLLLVLGVRMIREGMSD-DDEDEDASAAPQKQSVVMLALTAVATSI 119 A+++V +W+HWIAF LL+ LG RMI EG DDEDE+ ++ +L TA+ATS+ Sbjct: 79 ASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPR---RRHGFWLLVTTAIATSL 135 Query: 120 DAMAVGVGLAFIDVNILEAALLIGLATTTMVTIGVMVGRVLGHLIGKRAEIIGGVVLIGV 179 DAMAVGVGLAF+ VNI+ AL IG AT M T+G+MVGR +G +IGK+AEI+GG+VLIG+ Sbjct: 136 DAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGI 195 Query: 180 GAAILYEHLS 189 G IL+ H Sbjct: 196 GVQILWTHFH 205 >STM1834 [S] COG1971 Predicted membrane protein Sty Salmonella typhimurium LT2 Length = 206 Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 110/189 (58%), Positives = 141/189 (74%), Gaps = 4/189 (2%) Query: 1 MNFPALVLLALAMSTDAFAAAIGKGAAMQKPRFLQALRIGLLFGVIEAITPLIGWFAGSV 60 M+F A VLLA MS DAFAA+IGKGA + KP+F +ALR GL+FG +E +TPLIGW G + Sbjct: 19 MHFTATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGLGIL 78 Query: 61 ATKWVSQWDHWIAFTLLLVLGVRMIREGM-SDDDEDEDASAAPQKQSVVMLALTAVATSI 119 A+K+V +W+HWIAF LL+ LG RMI EG+ DEDE ++ S +L TA+ATS+ Sbjct: 79 ASKFVLEWNHWIAFVLLIFLGGRMIIEGIRGGSDEDE---TPLRRHSFWLLVTTAIATSL 135 Query: 120 DAMAVGVGLAFIDVNILEAALLIGLATTTMVTIGVMVGRVLGHLIGKRAEIIGGVVLIGV 179 DAMAVGVGLAF+ VNI+ AL IG AT M T+G+M+GR +G ++GKRAEI+GGVVLIG+ Sbjct: 136 DAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMIGRFIGPMLGKRAEILGGVVLIGI 195 Query: 180 GAAILYEHL 188 G IL+ H Sbjct: 196 GVQILWTHF 204 >ECs2531 [S] COG1971 Predicted membrane protein Ecs Escherichia coli O157:H7 Length = 206 Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 109/190 (57%), Positives = 140/190 (73%), Gaps = 4/190 (2%) Query: 1 MNFPALVLLALAMSTDAFAAAIGKGAAMQKPRFLQALRIGLLFGVIEAITPLIGWFAGSV 60 MN A VLLA MS DAFAA+IGKGA + KP+F +ALR GL+FG +E +TPLIGW G + Sbjct: 19 MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGML 78 Query: 61 ATKWVSQWDHWIAFTLLLVLGVRMIREGMSD-DDEDEDASAAPQKQSVVMLALTAVATSI 119 A+++V +W+HWIAF LL+ LG RMI EG DDEDE+ ++ +L TA+ATS+ Sbjct: 79 ASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPR---RRHGFWLLVTTAIATSL 135 Query: 120 DAMAVGVGLAFIDVNILEAALLIGLATTTMVTIGVMVGRVLGHLIGKRAEIIGGVVLIGV 179 DAMAVGVGLAF+ VNI+ AL IG AT M T+G+MVGR +G +IGK+AEI+GG+VLIG+ Sbjct: 136 DAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGI 195 Query: 180 GAAILYEHLS 189 G IL+ H Sbjct: 196 GVQILWTHFH 205 >Z2864 [S] COG1971 Predicted membrane protein EcZ Escherichia coli O157:H7 EDL933 Length = 206 Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 109/190 (57%), Positives = 139/190 (73%), Gaps = 4/190 (2%) Query: 1 MNFPALVLLALAMSTDAFAAAIGKGAAMQKPRFLQALRIGLLFGVIEAITPLIGWFAGSV 60 MN A VLLA MS DAFAA+IGKGA + KP+F +ALR GL+FG +E +TPLIGW G + Sbjct: 19 MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGML 78 Query: 61 ATKWVSQWDHWIAFTLLLVLGVRMIREGMSD-DDEDEDASAAPQKQSVVMLALTAVATSI 119 A+++V +W+HWIAF LL+ LG RMI EG DDEDE+ ++ +L TA+ATS+ Sbjct: 79 ASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPR---RRHGFWLLVTTAIATSL 135 Query: 120 DAMAVGVGLAFIDVNILEAALLIGLATTTMVTIGVMVGRVLGHLIGKRAEIIGGVVLIGV 179 DAMAVGVGLAF+ VNI+ AL IG AT M T+G+MVGR +G +IGK+AEI GG+VLIG+ Sbjct: 136 DAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEIXGGLVLIGI 195 Query: 180 GAAILYEHLS 189 G IL+ H Sbjct: 196 GVQILWTHFH 205