BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0038.p (262 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2673 [K] COG2378 Predicted transcriptional regulator Rso Rals... 222 5e-58 mlr3764 [K] COG2378 Predicted transcriptional regulator Mlo Meso... 213 3e-55 STM0410 [K] COG2378 Predicted transcriptional regulator Sty Salm... 209 6e-54 BMEI0305 [K] COG2378 Predicted transcriptional regulator Bme Bru... 166 6e-41 mll3208 [K] COG2378 Predicted transcriptional regulator Mlo Meso... 153 3e-37 >RSc2673 [K] COG2378 Predicted transcriptional regulator Rso Ralstonia solanacearum Length = 232 Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 154/224 (68%), Gaps = 3/224 (1%) Query: 29 RRADRLFQITQYLRGRRLTTARQLATWLSVSERTIYRDIRDLSLSGVPVDGEAGVGYRIK 88 RRADRLFQI Q LRGRRLTTA LA L VSERT+YRDIRDLS+SGVP++GEAG+GYR++ Sbjct: 6 RRADRLFQIAQILRGRRLTTAAMLADRLGVSERTVYRDIRDLSVSGVPIEGEAGIGYRMR 65 Query: 89 PGYDLPPLMFNADEIDALVIGMRMVQAWGGPQLGASAASALAKVVLALPKEKRDFVEATP 148 G+DL PLMF DE++ALV G RM++AW G + +S +AL K++ ALP E+R E T Sbjct: 66 AGFDLAPLMFTTDEVEALVAGARMIKAWSGGAMASSVEAALEKLMGALPAERRTEAETTR 125 Query: 149 LFAPAVPDECGQGERLEAIRQAIGSRHKLL-LDYSDAQQRASQRVVWPLALAFFGGTWLL 207 +FAP+ +A+ A+ SRH + L Y DAQ + + R + PL L F+G WL+ Sbjct: 126 IFAPSFGMNHDVRHAFDALHAAL-SRHAVARLAYRDAQGQLTDRCIQPLGLFFWGQVWLV 184 Query: 208 AAWCEAREDFRSFRLDRVQQMSEQG-HYPDRNGRRLPDFVRAMQ 250 AAWCE R+D+R+FRLDR ++ H+ + R L DF+R ++ Sbjct: 185 AAWCEHRQDYRTFRLDRCVKVDILARHFAESAERSLADFMRKVK 228 >mlr3764 [K] COG2378 Predicted transcriptional regulator Mlo Mesorhizobium loti Length = 239 Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 112/225 (49%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 28 MRRADRLFQITQYLRGRRLTTARQLATWLSVSERTIYRDIRDLSLSGVPVDGEAGVGYRI 87 MRRADRLFQI Q+LRG RL TA++L TWL VSERTIYRDI DL +GVP+DGEAGVGY + Sbjct: 1 MRRADRLFQIVQHLRGGRLVTAQKLGTWLEVSERTIYRDIADLQSTGVPIDGEAGVGYMM 60 Query: 88 KPGYDLPPLMFNADEIDALVIGMRMVQAWGGPQLGASAASALAKVVLALPKEKRDFVEAT 147 + G+DLPPLMF DEI ALV G RMV+A+GG + +A AL K+ LP ++D + T Sbjct: 61 REGFDLPPLMFTRDEIVALVAGARMVRAFGGAAMARAADEALVKIGAVLPDTEKDRIART 120 Query: 148 PLFAPAVPDECGQGERLEAIRQAIGSRHKLLLDYSDAQQRASQRVVWPLALAFFGGTWLL 207 + P E ++ I +A+ R L +DY D R + R + PL L F+G W L Sbjct: 121 EIHTPMWVVSDAAREAIDLIERAVEKRQVLTIDYCDEAGRGTARDIRPLGLWFWGKVWTL 180 Query: 208 AAWCEAREDFRSFRLDRVQQMSEQGH-YPDRNGRRLPDFVRAMQR 251 AWCE R+DFR+FR+DR+ + G + G++L DF RA++R Sbjct: 181 VAWCEMRDDFRAFRIDRIASVVIAGRIFKPERGKQLADFYRAVER 225 >STM0410 [K] COG2378 Predicted transcriptional regulator Sty Salmonella typhimurium LT2 Length = 230 Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 112/225 (49%), Positives = 143/225 (63%), Gaps = 1/225 (0%) Query: 29 RRADRLFQITQYLRGRRLTTARQLATWLSVSERTIYRDIRDLSLSGVPVDGEAGVGYRIK 88 RRADRLFQI Q LRGRRLTTA LA L+VSERTIYRDIRDLSLSGVPV+GEAG GYR+ Sbjct: 3 RRADRLFQIVQILRGRRLTTAALLAQRLAVSERTIYRDIRDLSLSGVPVEGEAGSGYRLM 62 Query: 89 PGYDLPPLMFNADEIDALVIGMRMVQAWGGPQLGASAASALAKVVLALPKEKRDFVEATP 148 G+DLPPLM E +AL++ +R+++ WGG L SA KV+ LP+E R E T Sbjct: 63 AGFDLPPLMLTHRESEALMVAIRLLKTWGGDSLSRELESAQEKVLAILPEESRRKAEQTR 122 Query: 149 LFAPAVPDECGQGERLEAIRQAIGSRHKLLLDYSDAQQRASQRVVWPLALAFFGGTWLLA 208 ++AP + + I QA+ ++ L L Y D S R + PL L F+G WLL Sbjct: 123 IYAPDLGTSPHSRSAFDLIHQAVSAQQVLALHYRDEAGHLSSRDIQPLGLFFWGEHWLLV 182 Query: 209 AWCEAREDFRSFRLDRVQQMSEQG-HYPDRNGRRLPDFVRAMQRQ 252 AWCE RED+R FRLDR Q++ + + R L DF+R ++ + Sbjct: 183 AWCERREDYRCFRLDRCLQITPLNRRFRETIDRSLRDFLRKVEHE 227 >BMEI0305 [K] COG2378 Predicted transcriptional regulator Bme Brucella melitensis Length = 210 Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 88/175 (50%), Positives = 112/175 (64%) Query: 28 MRRADRLFQITQYLRGRRLTTARQLATWLSVSERTIYRDIRDLSLSGVPVDGEAGVGYRI 87 MRRADRLFQI Q+LRG RL TARQLA L VSERTIYRDI DL +GVP+DGEAGVGY + Sbjct: 1 MRRADRLFQIVQHLRGGRLVTARQLAERLEVSERTIYRDISDLQSTGVPIDGEAGVGYIL 60 Query: 88 KPGYDLPPLMFNADEIDALVIGMRMVQAWGGPQLGASAASALAKVVLALPKEKRDFVEAT 147 + G++LPPLMF DEI ALV G R+++AWGG + A AL K+ LPKE+R + T Sbjct: 61 RQGFELPPLMFTRDEIVALVAGARLIRAWGGVSMARGAEEALVKIEAVLPKEERARITDT 120 Query: 148 PLFAPAVPDECGQGERLEAIRQAIGSRHKLLLDYSDAQQRASQRVVWPLALAFFG 202 + AP + ++A+ +A+ L + Y D + R SQR + P G Sbjct: 121 QIHAPKAHISMEERRIIDAVERAVDQGTVLNIRYRDLESRESQRDIRPPGALVLG 175 >mll3208 [K] COG2378 Predicted transcriptional regulator Mlo Mesorhizobium loti Length = 229 Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 136/227 (59%), Gaps = 3/227 (1%) Query: 28 MRRADRLFQITQYLR-GRRLTTARQLATWLSVSERTIYRDIRDLSLSGVPVDGEAGVGYR 86 M R++RL + Q LR RR + + LA L +S RT+YRDI L G P++GEAG+GY Sbjct: 1 MSRSERLLDLIQCLRRHRRPVSGQALADELGISIRTLYRDIATLQGQGAPIEGEAGLGYV 60 Query: 87 IKPGYDLPPLMFNADEIDALVIGMRMVQAWGGPQLGASAASALAKVVLALPKEKRDFVEA 146 +KPG+ LPPLMF +EI+A+V+G R V +L A+AA+ALAK+ LP + R+ ++A Sbjct: 61 LKPGFILPPLMFTDEEIEAIVLGSRWVAKQPDQRLSAAAANALAKIAAVLPDDLREDLDA 120 Query: 147 TPLFAPAVPDECGQGERLEAIRQAIGSRHKLLLDYSDAQQRASQRVVWPLALAFFGGTWL 206 + L P +G L +RQAI + KL Y DA ASQRVVWP AL FF + Sbjct: 121 STLLV-GPPAHAIEGIDLGVVRQAIRNERKLGFLYRDAGGAASQRVVWPFALGFFDKVRV 179 Query: 207 LAAWCEAREDFRSFRLDRVQQMSE-QGHYPDRNGRRLPDFVRAMQRQ 252 + AWCE R+DFR FR DR+ ++ YP R L ++ + +Q Sbjct: 180 VVAWCEMRQDFRHFRADRISALNAIDARYPRRRQALLKEWRATLDKQ 226