BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0014.p (239 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0703 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 318 8e-87 NMB1328 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 268 9e-72 NMA1542 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 267 2e-71 STM3109 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 249 3e-66 YPO0951 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 245 6e-65 >RSc0703 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Rso Ralstonia solanacearum Length = 251 Score = 318 bits (814), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 158/224 (70%), Positives = 176/224 (78%), Gaps = 4/224 (1%) Query: 17 RRIRSFVTRAGRVSVAQGRALEELGPRFLLPYDKAPLDLEAAFGRK-APTILEIGFGMGE 75 RRIRSFV RAGR S Q RA++ELGPRFLLPY APLD EAAFGR A I EIGFGMGE Sbjct: 30 RRIRSFVRRAGRTSTGQQRAIDELGPRFLLPYAAAPLDWEAAFGRTGARRIFEIGFGMGE 89 Query: 76 TSAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGHLENVRIIQHDAVEVLTNMIAPDTLA 135 TSA I+ L P+ +F+GVEVH PGVG+ LKLIGE + NVRI+ HDAVEVL MI TL Sbjct: 90 TSAHIAQLRPDDDFLGVEVHEPGVGALLKLIGERGIGNVRIVSHDAVEVLAQMIPEGTLD 149 Query: 136 GVHVFFPDPWHKARHNKRRLIQSPLVQLISSRLAPGGYLHCATDWEEYAIQMLDVLSAEL 195 G+HVFFPDPWHK RHNKRRLIQ P V +++ L PGGYLHCATDWEEYA QML+VLSAE Sbjct: 150 GIHVFFPDPWHKKRHNKRRLIQGPFVARLAAHLRPGGYLHCATDWEEYAHQMLEVLSAEP 209 Query: 196 TLKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEKRA 239 L+NTA G+ PRP+YR TKFE RGLRLGHGVWD+VF KRA Sbjct: 210 LLENTA---DGFAPRPDYRPVTKFEKRGLRLGHGVWDVVFRKRA 250 >NMB1328 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Nme Neisseria meningitidis MC58 Length = 238 Score = 268 bits (684), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 162/221 (73%), Gaps = 3/221 (1%) Query: 17 RRIRSFVTRAGRVSVAQGRALEELGPRFLLPYDKAPLDLEAAFGRKAPTILEIGFGMGET 76 R IRSFV R ++ AQ RA++ L F + Y P DL+A FG P ILEIGFGMG Sbjct: 19 RSIRSFVLRQSHMTAAQQRAIDTLWDSFGIDYQATPADLDARFGSSRPKILEIGFGMGTA 78 Query: 77 SAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGHLENVRIIQHDAVEVLTNMIAPDTLAG 136 +A+I+ +PE +F+ ++VH PGVG+ LKLI E HLEN+R+++HDAVEV+ NM+ +L G Sbjct: 79 TAEIARRLPETDFLAIDVHGPGVGNLLKLIDENHLENIRVMRHDAVEVVENMLQDGSLDG 138 Query: 137 VHVFFPDPWHKARHNKRRLIQSPLVQLISSRLAPGGYLHCATDWEEYAIQMLDVLSAELT 196 +H+FFPDPWHK RH+KRRLIQ+P + + +L GGY+H ATDWEEYA QML+VLS+ + Sbjct: 139 IHIFFPDPWHKKRHHKRRLIQAPFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDS 198 Query: 197 LKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEK 237 L+NTA D Y P P+YR TKFE RG RLGHGVWDLVF++ Sbjct: 199 LQNTAAD---YAPTPDYRPETKFEARGKRLGHGVWDLVFKR 236 >NMA1542 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase NmA Neisseria meningitidis Z2491 Length = 238 Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 162/221 (73%), Gaps = 3/221 (1%) Query: 17 RRIRSFVTRAGRVSVAQGRALEELGPRFLLPYDKAPLDLEAAFGRKAPTILEIGFGMGET 76 R IRSFV R ++ AQ RA++ L F + Y P DL+A FG P ILEIGFGMG Sbjct: 19 RSIRSFVLRQSHMTAAQQRAIDTLWGSFGIDYQATPADLDARFGSSRPKILEIGFGMGTA 78 Query: 77 SAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGHLENVRIIQHDAVEVLTNMIAPDTLAG 136 +A+I+ +PE +F+ ++VH PGVG+ LKLI E HLEN+R+++HDAVEV+ NM+ +L G Sbjct: 79 TAEIARRLPETDFLAIDVHGPGVGNLLKLIEENHLENIRVMRHDAVEVVENMLQDGSLDG 138 Query: 137 VHVFFPDPWHKARHNKRRLIQSPLVQLISSRLAPGGYLHCATDWEEYAIQMLDVLSAELT 196 +H+FFPDPWHK RH+KRRLIQ+P + + +L GGY+H ATDWEEYA QML+VLS+ + Sbjct: 139 IHIFFPDPWHKKRHHKRRLIQAPFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDS 198 Query: 197 LKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEK 237 L+NTA D Y P P+YR TKFE RG RLGHGVWDLVF++ Sbjct: 199 LQNTAAD---YAPTPDYRPETKFEARGKRLGHGVWDLVFKR 236 >STM3109 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Sty Salmonella typhimurium LT2 Length = 239 Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 122/234 (52%), Positives = 162/234 (69%), Gaps = 7/234 (2%) Query: 4 NKSGKPLFYDPSERRIRSFVTRAGRVSVAQGRALEELGPRFLLPYDKAPLDLEAAFGRKA 63 +++G+PL RRIRSFV R GR++ Q ALE P + + +AP+D FGR+A Sbjct: 11 DENGRPL------RRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEAPVDFATLFGREA 64 Query: 64 PTILEIGFGMGETSAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGHLENVRIIQHDAVE 123 P LEIGFGMG + ++ PE+NF+G+EVH+PGVG+ L E +EN+R++ HDAVE Sbjct: 65 PVTLEIGFGMGASLVAMAKARPEQNFLGIEVHSPGVGACLASANEEGVENLRVMCHDAVE 124 Query: 124 VLTNMIAPDTLAGVHVFFPDPWHKARHNKRRLIQSPLVQLISSRLAPGGYLHCATDWEEY 183 VL MI ++L+ V +FFPDPWHKARHNKRR++Q P +L+ S+L GG H ATDWE Y Sbjct: 125 VLHKMIPDNSLSMVQLFFPDPWHKARHNKRRIVQVPFAELVLSKLKLGGVFHMATDWEAY 184 Query: 184 AIQMLDVLSAELTLKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEK 237 A ML+V+S+ KN ++ + YVPRPE R TKFE RG RLGHGVWDL+FE+ Sbjct: 185 AEHMLEVMSSIDGYKNL-SESNDYVPRPESRPVTKFEQRGHRLGHGVWDLMFER 237 >YPO0951 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Ype Yersinia pestis Length = 239 Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 118/222 (53%), Positives = 155/222 (69%), Gaps = 1/222 (0%) Query: 17 RRIRSFVTRAGRVSVAQGRALEELGPRFLLPYDKAPLDLEAAFGRKAPTILEIGFGMGET 76 RRIRSFV R GR++ Q AL+ P + Y AP+DL FGR+AP +LEIGFGMG + Sbjct: 18 RRIRSFVRRQGRLTKGQQLALDSYWPVMGVEYQAAPVDLNTLFGREAPIVLEIGFGMGTS 77 Query: 77 SAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGHLENVRIIQHDAVEVLTNMIAPDTLAG 136 ++ P++NF+G+EVH+PGVG+ L + L N+RI+ HDAVEVL NMI +L Sbjct: 78 LVTMATNNPQQNFLGIEVHSPGVGACLSSAHDAGLSNLRIMCHDAVEVLENMIPEASLDM 137 Query: 137 VHVFFPDPWHKARHNKRRLIQSPLVQLISSRLAPGGYLHCATDWEEYAIQMLDVLSAELT 196 V +FFPDPWHKARHNKRR++Q+P V+L+ S+L GG H ATDW+ YA ML+V+S Sbjct: 138 VQLFFPDPWHKARHNKRRIVQTPFVELVKSKLKVGGVFHMATDWQPYAEHMLEVMSGVSG 197 Query: 197 LKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEKR 238 N ++ + YVPRP+ R TKFE RG RLGHGVWDL+FE++ Sbjct: 198 YLNL-SEQNDYVPRPDSRPLTKFELRGQRLGHGVWDLMFERK 238