BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0009.p         (84 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO1286 [R] COG0727 Predicted Fe-S-cluster oxidoreductase Ype Ye...   104   5e-23
VC1057 [R] COG0727 Predicted Fe-S-cluster oxidoreductase Vch Vib...    96   1e-20
RSc0699 [R] COG0727 Predicted Fe-S-cluster oxidoreductase Rso Ra...    74   6e-14

>YPO1286 [R] COG0727 Predicted Fe-S-cluster oxidoreductase Ype Yersinia
          pestis
          Length = 84

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/84 (58%), Positives = 57/84 (67%)

Query: 1  MQCRDRCGACCIAPSITSPIPGMPQGKPAGVPCIQLDEAMRCRLFGRPERPAFCGGLQPA 60
          M CR  CGACCIAPSI+SPIPGMP GKPA   C+ LD+ MRC +F  P RPA C  LQ  
Sbjct: 1  MDCRSDCGACCIAPSISSPIPGMPLGKPANTRCVHLDDNMRCGIFYSPLRPAVCASLQAM 60

Query: 61 ADMCGDSRSAALIWLQTLEQATAP 84
           +MC  +R  AL++L  LE  TAP
Sbjct: 61 REMCHHTREEALVYLIALEAVTAP 84


>VC1057 [R] COG0727 Predicted Fe-S-cluster oxidoreductase Vch Vibrio
          cholerae
          Length = 83

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/82 (58%), Positives = 56/82 (68%)

Query: 1  MQCRDRCGACCIAPSITSPIPGMPQGKPAGVPCIQLDEAMRCRLFGRPERPAFCGGLQPA 60
          M CR  CGACCIAPSI+SPIPGMP GKPAGV C+QL+E   C+LFGRPERP  C   +  
Sbjct: 2  MDCRLGCGACCIAPSISSPIPGMPNGKPAGVRCVQLNEDNLCQLFGRPERPKVCHDFKAC 61

Query: 61 ADMCGDSRSAALIWLQTLEQAT 82
            +CG +   AL  L  LE+ T
Sbjct: 62 PVVCGKTNQQALANLTELERLT 83


>RSc0699 [R] COG0727 Predicted Fe-S-cluster oxidoreductase Rso Ralstonia
          solanacearum
          Length = 63

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 43/61 (70%)

Query: 23 MPQGKPAGVPCIQLDEAMRCRLFGRPERPAFCGGLQPAADMCGDSRSAALIWLQTLEQAT 82
          MP GKPAG  C+QLD   RCR+FGRPERPA C  L+P  DMCG S + A+ +L  LE AT
Sbjct: 1  MPGGKPAGARCVQLDADDRCRIFGRPERPAVCASLRPEPDMCGASTAHAMQFLTRLEIAT 60

Query: 83 A 83
          A
Sbjct: 61 A 61