BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0003.p (391 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0011 [M] COG0845 Membrane-fusion protein Rso Ralstonia solana... 430 e-120 PA0425 [M] COG0845 Membrane-fusion protein Pae Pseudomonas aerug... 353 5e-97 RSp0819 [M] COG0845 Membrane-fusion protein Rso Ralstonia solana... 347 2e-95 YPO3132 [M] COG0845 Membrane-fusion protein Ype Yersinia pestis 344 2e-94 acrA [M] COG0845 Membrane-fusion protein Eco Escherichia coli K12 344 2e-94 >RSc0011 [M] COG0845 Membrane-fusion protein Rso Ralstonia solanacearum Length = 398 Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust. Identities = 235/359 (65%), Positives = 284/359 (79%), Gaps = 2/359 (0%) Query: 8 ALVACGQKPA-AQGGPMPPSEVSVVTIAPQRVAITNELPGRVEAFRVAQVRARVAGIVQK 66 AL ACG K A GG MPP+EV VVT+ P V +T ELPGR+EA RVAQVRARVAGIV K Sbjct: 19 ALAACGNKQAQGPGGGMPPTEVGVVTVQPHSVGLTTELPGRLEATRVAQVRARVAGIVLK 78 Query: 67 RVFKEGSEVKEGQVLFQIDPAQYKASLESAQATLARAQANLTQTTLTAQRYKPLVEVNAV 126 R ++EGS+VK VLF+IDPAQY+ASL+SA+A LARA+A TQ L A+RYKPLV NA+ Sbjct: 79 RTYQEGSDVKANDVLFRIDPAQYQASLDSAKAQLARAEATQTQAQLKAERYKPLVATNAI 138 Query: 127 SKQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPISGRIGRALVTEGALVGQG 186 SKQ+YD+AVAA KQA ADV A +AAV+TA LNLGYATVTSPISGR G A VTEGALVGQG Sbjct: 139 SKQDYDDAVAAAKQATADVGAARAAVETAKLNLGYATVTSPISGRAGLAQVTEGALVGQG 198 Query: 187 -DATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDNKASVTLELENGQAYPL 245 DAT LA VQQ+DP+Y+ TQSS ++++LQ+A+ AG+L + GD A VTL E+G+ Y Sbjct: 199 SDATLLATVQQIDPIYLTFTQSSTEVMRLQEALKAGKLAAAGDTAAKVTLVTEDGRVYAQ 258 Query: 246 PGKLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQAVDEQALLVPQQAVVRD 305 GKL FSD++VD+ TGS++LRA FPN +R LLPG YVRA++EQAVD+QA+ VPQQAV R Sbjct: 259 TGKLYFSDLTVDQTTGSITLRAIFPNAERTLLPGMYVRARLEQAVDQQAITVPQQAVSRG 318 Query: 306 AGGSTVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIVEGLQKVRPGATVKPV 364 A G++VM+V+AE KV PRPV+ A G +W V GLK GD+VIV+GLQKVRPGA VKPV Sbjct: 319 ADGASVMIVDAEGKVAPRPVQADRAVGTDWIVSSGLKAGDKVIVDGLQKVRPGAPVKPV 377 >PA0425 [M] COG0845 Membrane-fusion protein Pae Pseudomonas aeruginosa Length = 383 Score = 353 bits (905), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 198/385 (51%), Positives = 257/385 (66%), Gaps = 18/385 (4%) Query: 1 MTVAIAAALVACGQKPAAQGGPMPPSEVSVVTIAPQRVAITNELPGRVEAFRVAQVRARV 60 + VAI+A L CG+ A P EV +VT+ Q V + ELPGR AFR+A+VR +V Sbjct: 14 LLVAISA-LSGCGKSEAPPPAQTP--EVGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQV 70 Query: 61 AGIVQKRVFKEGSEVKEGQVLFQIDPAQYKASLESAQATLARAQANLTQTTLTAQRYKPL 120 GI+ KR+FKEGS+VK GQ L+QIDPA Y+A +SAQA LA Q AQRYK L Sbjct: 71 NGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQ-------AQRYKLL 123 Query: 121 VEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPISGRIGRALVTEG 180 V AVSKQ+Y +A AA Q+ KAAV+ A +NL Y V SPISGRIGR+ VTEG Sbjct: 124 VADQAVSKQQYADANAAYLQS-------KAAVEQARINLRYTKVLSPISGRIGRSAVTEG 176 Query: 181 ALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDNKASVTLELENG 240 ALV G A +A VQQLDP+YV+VTQ S LL+L++ +A+GQL+ GDN A V+L+LE+G Sbjct: 177 ALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDG 236 Query: 241 QAYPLPGKLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQAVDEQALLVPQQ 300 YPL G+L FS++SVDE TGSV++RA FPNP LLPG +V A++++ V ++A+L PQQ Sbjct: 237 SQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEGVKQKAILAPQQ 296 Query: 301 AVVRDAGG-STVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIVEGLQKVRPGA 359 V RD G +T +VVNA+NKVE R +K G+ W V +GL GD++I EGLQ V+PG Sbjct: 297 GVTRDLKGQATALVVNAQNKVELRVIKADRVIGDKWLVTEGLNAGDKIITEGLQFVQPGV 356 Query: 360 TVKPVQWNPAGAPAQASGQPAKQEA 384 VK V + +A PAK ++ Sbjct: 357 EVKTVPAKNVASAQKADAAPAKTDS 381 >RSp0819 [M] COG0845 Membrane-fusion protein Rso Ralstonia solanacearum Length = 409 Score = 347 bits (891), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 189/341 (55%), Positives = 243/341 (71%), Gaps = 1/341 (0%) Query: 28 VSVVTIAPQRVAITNELPGRVEAFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFQIDPA 87 V V+T+ PQRV + ELPGR F VA VR +V GI++ R F+EGS+VK G L+QIDPA Sbjct: 40 VGVMTVQPQRVTLDTELPGRTVPFLVADVRPQVNGIIKARKFREGSDVKAGAALYQIDPA 99 Query: 88 QYKASLESAQATLARAQANLTQTTLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAA 147 Y+A+ +S A LA+AQANL T L A+R+K LV + AVS+Q+YD+A AA Q EADVAA Sbjct: 100 TYQAAYDSNVAALAKAQANLKTTRLKAERHKELVAIQAVSRQDYDDAAAALAQGEADVAA 159 Query: 148 GKAAVQTASLNLGYATVTSPISGRIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQS 207 +A V+T+ +NL YA V +PISGRIGR+ VT GALV T LA +QQLDP+YV+VTQ Sbjct: 160 ARANVETSRINLAYARVDAPISGRIGRSSVTPGALVTANQTTSLATIQQLDPIYVDVTQP 219 Query: 208 SADLLKLQQAMAAGQLKSVGDNKASVTLELENGQAYPLPGKLLFSDISVDENTGSVSLRA 267 SA LL+L+QAMA G L+ G N A+V L LE+G AYPL GKL FSD++VD+NTGSV+LRA Sbjct: 220 SAALLRLRQAMARGDLQKSGANAATVRLLLEDGSAYPLEGKLEFSDVTVDQNTGSVTLRA 279 Query: 268 EFPNPKRLLLPGTYVRAKIEQAVDEQALLVPQQAVVRDAGGSTV-MVVNAENKVEPRPVK 326 FPNP +LLPG YVRA + + V ++ALLVPQQAV RD+ G VV + K++ R ++ Sbjct: 280 VFPNPSAILLPGMYVRAVLPEGVKDEALLVPQQAVARDSTGKPFAYVVGNDRKLQRRTLE 339 Query: 327 TGGARGNNWQVLDGLKEGDRVIVEGLQKVRPGATVKPVQWN 367 T G+ W V GL+ GD+++VEGL + PGA VK W Sbjct: 340 TERTVGDQWLVRSGLRIGDQLVVEGLPRAVPGAEVKTTPWT 380 >YPO3132 [M] COG0845 Membrane-fusion protein Ype Yersinia pestis Length = 395 Score = 344 bits (883), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 193/375 (51%), Positives = 252/375 (67%), Gaps = 3/375 (0%) Query: 9 LVACGQKPAAQGGPMPPSEVSVVTIAPQRVAITNELPGRVEAFRVAQVRARVAGIVQKRV 68 L+ C K AAQ G EV VVT+ + + IT +LPGR AFRVA+VR +V+GI+ KR Sbjct: 22 LIGCNDKDAAQAGAQQAPEVGVVTLKAEPLNITTDLPGRTSAFRVAEVRPQVSGIILKRN 81 Query: 69 FKEGSEVKEGQVLFQIDPAQYKASLESAQATLARAQANLTQTTLTAQRYKPLVEVNAVSK 128 + EGS+V G L+QIDPA Y+A+ +SA+ LA+AQA+ LT RYKPL+ N +SK Sbjct: 82 YIEGSDVTAGTSLYQIDPATYQAAYDSAKGDLAKAQASAQIAHLTVNRYKPLLGTNYISK 141 Query: 129 QEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPISGRIGRALVTEGALVGQGDA 188 QEYD A++ +QA+A V A KAA+++A +NL Y V SPISGR G++ VTEGALV G A Sbjct: 142 QEYDQALSDAQQADATVLAAKAALESARINLAYTQVRSPISGRTGKSAVTEGALVTSGQA 201 Query: 189 TQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDNKASVTLELENGQAYPLPGK 248 + + VQQLDP+YV+VTQSS + L+L++ +A G LK + KA V L LENG Y G Sbjct: 202 SAMTTVQQLDPMYVDVTQSSDEFLRLKKELADGILKQ-ENGKAKVRLLLENGVEYTETGT 260 Query: 249 LLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQAVDEQALLVPQQAVVRD-AG 307 L FS ++VDE TGS++LRA FPNP LLPG +VRA++++ + ALLVPQQ V R+ G Sbjct: 261 LEFSGVTVDETTGSITLRAIFPNPNEALLPGMFVRARLDEGIRPDALLVPQQGVTRNPRG 320 Query: 308 GSTVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIVEGLQKVRPGATVKPVQWN 367 +T MVV A NKVE R + A GN W V +GLK GDR+I+ GLQK++PG VK VQ Sbjct: 321 EATAMVVGAGNKVEMRTLIANQAIGNKWLVTEGLKAGDRLIISGLQKIKPGVEVK-VQEV 379 Query: 368 PAGAPAQASGQPAKQ 382 AP A AK+ Sbjct: 380 TDTAPETAPADTAKK 394 >acrA [M] COG0845 Membrane-fusion protein Eco Escherichia coli K12 Length = 397 Score = 344 bits (883), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 192/356 (53%), Positives = 250/356 (70%), Gaps = 3/356 (0%) Query: 8 ALVACGQKPAAQGGPMPPSEVSVVTIAPQRVAITNELPGRVEAFRVAQVRARVAGIVQKR 67 AL C K A QGG P+ V VVT+ + + IT ELPGR A+R+A+VR +V+GI+ KR Sbjct: 21 ALTGCDDKQAQQGGQQMPA-VGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKR 79 Query: 68 VFKEGSEVKEGQVLFQIDPAQYKASLESAQATLARAQANLTQTTLTAQRYKPLVEVNAVS 127 FKEGS+++ G L+QIDPA Y+A+ +SA+ LA+AQA LT RY+ L+ +S Sbjct: 80 NFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYIS 139 Query: 128 KQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPISGRIGRALVTEGALVGQGD 187 KQEYD A+A +QA A V A KAAV+TA +NL Y VTSPISGRIG++ VTEGALV G Sbjct: 140 KQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQ 199 Query: 188 ATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDNKASVTLELENGQAYPLPG 247 AT LA VQQLDP+YV+VTQSS D L+L+Q +A G LK + KA V+L +G +P G Sbjct: 200 ATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQ-ENGKAKVSLITSDGIKFPQDG 258 Query: 248 KLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQAVDEQALLVPQQAVVRD-A 306 L FSD++VD+ TGS++LRA FPNP LLPG +VRA++E+ ++ A+LVPQQ V R Sbjct: 259 TLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPR 318 Query: 307 GGSTVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIVEGLQKVRPGATVK 362 G +TV+VV A++KVE RP+ A G+ W V +GLK GDRV++ GLQKVRPG VK Sbjct: 319 GDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVK 374