BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0006.p (213 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC0107 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 169 5e-42 AGc259 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 164 1e-40 mll1253 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 160 3e-39 SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate tran... 159 5e-39 MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 157 1e-38 >CAC0107 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Cac Clostridium acetobutylicum Length = 279 Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 129/234 (55%), Gaps = 46/234 (19%) Query: 14 IDLDIRAGEFVCLLGPSGCGKSTLLNAIAGFQD-VSGEISVDGKRVKGPGLDRGVVFQSS 72 ++L I+ GEF+CLLGPSGCGKSTLLN IAG + G + ++ +K PG DR +FQ S Sbjct: 25 VNLSIKKGEFICLLGPSGCGKSTLLNIIAGLEKPTKGIVYLNNMEIKAPGPDRAFMFQES 84 Query: 73 EALFPWLSVRENVEYGLKLRGVASAER----------------LRSYX------------ 104 ALFPWL V +NVE+G+K++ V ER SY Sbjct: 85 -ALFPWLKVIDNVEFGMKIKDVPKEERREKALKYLKMVHLTKFQNSYVHELSGGMRQRVA 143 Query: 105 -------------MDEPFGALDAQTREVLQSELDRIWKSTGCTIVFVTHDIWEAILLADR 151 MDEPF ALD+QT+ +LQ EL IW T TIVFVTH++ EA+LLADR Sbjct: 144 LARALTLDSEVLLMDEPFSALDSQTKSILQLELQNIWWETKKTIVFVTHNVEEAVLLADR 203 Query: 152 VVTMTAGPRAHIKTIEEVHLPHPRDPADPACMALYAR-IRDDIGAEVTRVLRAQ 204 VV M A P IK I E+ L PR+ A ++ AR + D+ EV +V + + Sbjct: 204 VVVMAANP-GRIKNIFEIKLARPRE-AQSVDLSYVAREVMRDLKEEVEKVAKTE 255 >AGc259 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 266 Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 99/227 (43%), Positives = 129/227 (56%), Gaps = 47/227 (20%) Query: 15 DLDIRAGEFVCLLGPSGCGKSTLLNAIAGF-QDVSGEISVDGKRVKGPGLDRGVVFQSSE 73 +L+I +FV +LGPSGCGKSTLL IAG + +GE+ + GK V GPG DRG+VFQS Sbjct: 34 NLEIPRNDFVTILGPSGCGKSTLLRIIAGLDRPTTGEVLLSGKAVTGPGADRGMVFQSY- 92 Query: 74 ALFPWLSVRENVEYGLKLRGVASAER------------LRSYX----------------- 104 LFPWL++RENV +GL+ RGVA E+ LR + Sbjct: 93 TLFPWLTIRENVAFGLRERGVAEKEKWEIVDSYIDKVGLRGFENHWPKQLSGGMQQRTAI 152 Query: 105 ------------MDEPFGALDAQTREVLQSELDRIWKSTGCTIVFVTHDIWEAILLADRV 152 +DEPFGALD QTR ++Q L IW+ T++FVTHDI EA+ +A RV Sbjct: 153 ARALANGPKILLLDEPFGALDNQTRGLMQELLLGIWEREQKTVIFVTHDIEEAVFMASRV 212 Query: 153 VTMTAGPRAHIKTIEEVHLPHPRD---PADPACMALYARIRDDIGAE 196 VTM+A P IK+I V LPHPR A P L A++ ++I +E Sbjct: 213 VTMSARP-GRIKSITPVDLPHPRHYTIKASPEFSELRAKLTEEIRSE 258 >mll1253 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mlo Mesorhizobium loti Length = 267 Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 100/236 (42%), Positives = 128/236 (54%), Gaps = 47/236 (19%) Query: 14 IDLDIRAGEFVCLLGPSGCGKSTLLNAIAGFQDVS-GEISVDGKRVKGPGLDRGVVFQSS 72 IDL + A +F+ +LGPSGCGKSTLL +AG + S G + +D K V PG DRG+VFQS Sbjct: 32 IDLAVAANDFITILGPSGCGKSTLLRIVAGLEAPSEGRVLLDDKAVTRPGPDRGMVFQSY 91 Query: 73 EALFPWLSVRENVEYGLKLRGVASAER---LRSYX------------------------- 104 LFPWL+V EN+ +GL+ RG+A ER + SY Sbjct: 92 -TLFPWLTVSENIAFGLRERGMAPKERDDIVASYVDLVGLKGFENHWPKQLSGGMQQRTA 150 Query: 105 -------------MDEPFGALDAQTREVLQSELDRIWKSTGCTIVFVTHDIWEAILLADR 151 +DEPFGALD QTR ++Q L IW+ T++FVTHDI EAI +A R Sbjct: 151 IARALANDPEILLLDEPFGALDNQTRGLMQELLLGIWERRKKTVLFVTHDIEEAIFMASR 210 Query: 152 VVTMTAGPRAHIKTIEEVHLPHPRD---PADPACMALYARIRDDIGAEVTRVLRAQ 204 V+ MTA P IK+ + LPHPR P AL AR+ +DI E R +AQ Sbjct: 211 VIVMTARP-GSIKSDVAIDLPHPRHYTLKTSPEFSALKARLTEDIRVEAMRTAQAQ 265 >SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Sme Sinorhizobium meliloti Length = 278 Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 104/250 (41%), Positives = 128/250 (51%), Gaps = 47/250 (18%) Query: 2 GLTIGSNDIMAGIDLDIRAGEFVCLLGPSGCGKSTLLNAIAGFQD-VSGEISVDGKRVKG 60 G+T ++ G+DL I GEF+ L+GPSG GKS LL+ IAG SG S+DG V Sbjct: 25 GVTSNRIAVLDGVDLSIDRGEFITLVGPSGSGKSVLLDVIAGLTGATSGVASIDGIEVSK 84 Query: 61 PGLDRGVVFQSSEALFPWLSVRENVEYGLKLRGVASAERLRS------------------ 102 P VFQ ALFPW + +NVEY L++RGV +AER Sbjct: 85 PHARTAYVFQQY-ALFPWRTALQNVEYALEVRGVPAAERREKARHFLHLFGLNGFEDRFP 143 Query: 103 -----------------------YXMDEPFGALDAQTREVLQSELDRIWKSTGCTIVFVT 139 MDEPF ALDAQTR++LQSEL RIW+ T+VFVT Sbjct: 144 SQLSGGMQQRVAIARALSTDPQVLLMDEPFAALDAQTRDILQSELLRIWEQIKTTVVFVT 203 Query: 140 HDIWEAILLADRVVTMTAGPRAHIKTIEEVHLPHPRD---PADPACMALYARIRDDIGAE 196 H I EAI LADRVV MTA P A +K I E+ LP PRD A A R+ + + E Sbjct: 204 HSIDEAIYLADRVVVMTARP-ARVKEIVEIDLPRPRDLDIRNGEAFNAYRGRVWESLRDE 262 Query: 197 VTRVLRAQGL 206 V++ R L Sbjct: 263 VSKAQRDWAL 272 >MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mka Methanopyrus kandleri AV19 Length = 246 Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 93/229 (40%), Positives = 126/229 (55%), Gaps = 45/229 (19%) Query: 10 IMAGIDLDIRAGEFVCLLGPSGCGKSTLLNAIAGFQDV-SGEISVDGKRVKGPGLDRGVV 68 ++ GI ++ GEF ++GPSGCGK+TLL IAG +D +G + VDG+ V+ PG DR +V Sbjct: 19 VLDGITFEVSEGEFFAIVGPSGCGKTTLLKIIAGLEDYDAGRVLVDGEEVREPGPDRALV 78 Query: 69 FQSSEALFPWLSVRENVEYGLKLRGV--ASAERL-------------------------- 100 FQ A+FPW +V ENV + ++G AER+ Sbjct: 79 FQEY-AIFPWKTVLENVMFAPLMQGKDPEEAERIARECLKVVPGLEGFEDAYPKQLSGGM 137 Query: 101 --------------RSYXMDEPFGALDAQTREVLQSELDRIWKSTGCTIVFVTHDIWEAI 146 R MDEPF A+DAQTR +Q EL +IW+ TG TI+ VTH++ EA+ Sbjct: 138 KQRVAIARALAAEPRILLMDEPFAAVDAQTRNKMQEELLKIWERTGQTILLVTHNVEEAV 197 Query: 147 LLADRVVTMTAGPRAHIKTIEEVHLPHPRDPADPACMALYARIRDDIGA 195 LADRV+ ++ P A I I E+ LP PRD DP + L ARI D IG+ Sbjct: 198 FLADRVMVLSPRP-AEIVDIVEIDLPRPRDRTDPEFVELRARILDMIGS 245