BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0601.p         (126 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA5314 [R] COG3450 Predicted enzyme of the cupin superfamily Pae...    84   1e-16
AGc2315 [R] COG3450 Predicted enzyme of the cupin superfamily At...    79   3e-15
SMc01810 [R] COG3450 Predicted enzyme of the cupin superfamily S...    78   6e-15
PA2762 [R] COG3450 Predicted enzyme of the cupin superfamily Pae...    71   6e-13
mlr8466 Non COG                                                        67   7e-12

>PA5314 [R] COG3450 Predicted enzyme of the cupin superfamily Pae
           Pseudomonas aeruginosa
          Length = 120

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 2/114 (1%)

Query: 7   ITQFRLSSPTPEFDHPREERRLDGNPLRTTWNHFTSASGEVSAGIWACERGSWRIAFAQN 66
           I  F  ++  PE   P  E+ L G+P ++  NH+ S  G+ +AGIW    G W + + ++
Sbjct: 6   IVDFAQANSAPEHYSPAPEKILKGDPKQSVRNHYGSPCGQFNAGIWEGAVGQWTVNYTEH 65

Query: 67  KDEYFYVLEGRCRVIDEQGHAAEAGPGDAMVIPAGFKGVFEVVEAVRKHYVIVE 120
             EY  +++G   + D  G+A     GD  VIPAGF+G +EV+EA RK YVI E
Sbjct: 66  --EYCEIIQGVSVLRDRHGNAKTVRAGDRFVIPAGFQGTWEVLEACRKVYVIFE 117


>AGc2315 [R] COG3450 Predicted enzyme of the cupin superfamily Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 113

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 22  PREERRLDGNPLRTTWNHFTSASGEVSAGIWACERGSWRIAFAQNKDEYFYVLEGRCRVI 81
           P  ER + G+P  TTWN    ASG + AGIW    G WR+ +  ++ EYF +LEG   + 
Sbjct: 18  PAPERLISGDPRFTTWN-LEEASGGIYAGIWQSTPGKWRVVY--DEWEYFNILEGHSILT 74

Query: 82  DEQGHAAEAGPGDAMVIPAGFKGVFEVVEAVRKHYVI 118
           ++ G   +  PGD +V+  GF G +EV+E  RK YVI
Sbjct: 75  EDGGAPRDLRPGDRLVLRPGFTGTWEVLETTRKDYVI 111


>SMc01810 [R] COG3450 Predicted enzyme of the cupin superfamily Sme
           Sinorhizobium meliloti
          Length = 113

 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 7   ITQFRLSSPTPEFDHPREERRLDGNPLRTTWNHFTSASGEVSAGIWACERGSWRIAFAQN 66
           +  F  SS   E   P  +R + GNP   TWN F  A G + AGIW    G WRI +  +
Sbjct: 4   MLNFDPSSLEAEIGAPAPDRLISGNPEFRTWN-FEEAGG-LYAGIWEATPGKWRIVY--D 59

Query: 67  KDEYFYVLEGRCRVIDEQGHAAEAGPGDAMVIPAGFKGVFEVVEAVRKHYVI 118
           + EYF++L G   V +E G       GD++V+  GFKG +EVVE  RK YVI
Sbjct: 60  EWEYFHILSGHSIVTEEGGVPLHLRAGDSLVLRPGFKGTWEVVETTRKDYVI 111


>PA2762 [R] COG3450 Predicted enzyme of the cupin superfamily Pae
           Pseudomonas aeruginosa
          Length = 114

 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 7   ITQFRLSSPTPEFDHPREERRLDGNPLRTTWNHFTSASGEVSAGIWACERGSWRIAFAQN 66
           IT  R + P P  D  +  +R+DG+P     N + SA G    G W C  G W + +   
Sbjct: 5   ITVLRDTCPVPVLDATKW-KRIDGDPHTVNLNAYASADGSKLMGTWICTPGKWEVNY--E 61

Query: 67  KDEYFYVLEGRCRVIDEQGHAAEAGPGDAMVIPAGFKGVFEVVEAVRKHYV 117
           + E+ + L+G C +  E         GD  VI  G +G +EVVE VRK++V
Sbjct: 62  RWEFCHFLDGYCIITPEGEQPVHLRAGDVFVIEPGLRGTWEVVETVRKYFV 112


>mlr8466 Non COG
          Length = 114

 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 17  PEFDHPREERRLDGNPLRTTWNHFTSASGEVSAGIWACERGSWRIAFAQNKDEYFYVLEG 76
           PE   P  +R + G+P   TWN      G + AGIW    G WRI +  ++ E+ ++L G
Sbjct: 14  PESGAPAPDRLISGDPKFRTWN-VEERDGGLYAGIWESTPGKWRIVY--DEWEFCHILFG 70

Query: 77  RCRVIDEQGHAAEAGPGDAMVIPAGFKGVFEVVEAVRKHYVI 118
              + +++G A     GD+ V+  GFKG +EV+E  RK YVI
Sbjct: 71  VSVIAEDEGEARTVKAGDSFVLRPGFKGSWEVLETTRKEYVI 112