BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0599.p (211 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1449 [O] COG0602 Organic radical activating enzymes Rso Ralst... 305 6e-83 CC3159 [O] COG0602 Organic radical activating enzymes Ccr Caulob... 265 6e-71 msl8680 [O] COG0602 Organic radical activating enzymes Mlo Mesor... 264 9e-71 PM0184 [O] COG0602 Organic radical activating enzymes Pmu Pasteu... 98 1e-20 HI1189 [O] COG0602 Organic radical activating enzymes Hin Haemop... 94 2e-19 >RSc1449 [O] COG0602 Organic radical activating enzymes Rso Ralstonia solanacearum Length = 212 Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 143/211 (67%), Positives = 169/211 (80%), Gaps = 1/211 (0%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TY++KEIFYTLQGEGA+ GR AVFCRF+GCNLW+GRE DRA AICQFCDTDFVGTDG Sbjct: 1 MTYAVKEIFYTLQGEGANTGRAAVFCRFAGCNLWSGREADRAAAICQFCDTDFVGTDGTL 60 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSK-YVVFTGGEPLLQLDAALIEAMHAVGFEIAIETN 119 GGK+ + LA + + WPA + VV TGGEPLLQLD LI+A+HA GFEIAIETN Sbjct: 61 GGKYPTADALADTVAAQWPAAATGGRPLVVCTGGEPLLQLDRPLIDALHARGFEIAIETN 120 Query: 120 GTIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGL 179 GT+ VPDG+DW+CVSPKMG+EL V RG ELKVV+PQPGQ LD YE+LDF+HF LQPMDG Sbjct: 121 GTLAVPDGIDWVCVSPKMGAELVVTRGDELKVVIPQPGQDLDAYERLDFRHFFLQPMDGP 180 Query: 180 QAAANTRLAIEMVKNNPKWKLSIQTHKLLNI 210 A NT LA+E+ + P+W LS+QTHK+L I Sbjct: 181 LARRNTALAVELCQRRPRWHLSLQTHKMLGI 211 >CC3159 [O] COG0602 Organic radical activating enzymes Ccr Caulobacter vibrioides Length = 210 Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 125/211 (59%), Positives = 155/211 (73%), Gaps = 1/211 (0%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TYS+KEIF TLQGEG AG+ AVFCRFSGCNLW+GRE+DRA+A+C FCDTDFVGTDGEN Sbjct: 1 MTYSVKEIFLTLQGEGGQAGKAAVFCRFSGCNLWSGREQDRAKAVCTFCDTDFVGTDGEN 60 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKF + +LAA +++ W + VV TGGEP LQLD A I A+HA GF+IA+ETNG Sbjct: 61 GGKFATAEDLAAAVEAQWTGG-PDDRLVVCTGGEPFLQLDDAAIAALHARGFQIAVETNG 119 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 TI P GVDWICVSPK + + G ELK+V PQ + + LDF+ F LQPMDG Sbjct: 120 TITAPAGVDWICVSPKADAPVVQTSGQELKLVFPQEKAMPERFAALDFERFYLQPMDGPD 179 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 ANT+LA+ ++P+W+LS+QTHK L +P Sbjct: 180 RDANTQLAVAYCLSHPQWRLSVQTHKYLGLP 210 >msl8680 [O] COG0602 Organic radical activating enzymes Mlo Mesorhizobium loti Length = 211 Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 121/211 (57%), Positives = 153/211 (72%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 ++Y++KEIFYTLQGEG +AGR AVFCRF+GCNLW+GRE DRA+A C FCDTDFVG DG Sbjct: 1 MSYAVKEIFYTLQGEGRNAGRAAVFCRFAGCNLWSGREGDRAKAFCGFCDTDFVGVDGPG 60 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 G F + +LA ++ W + A ++VV TGGEPLLQ+D L+EA+H + FEIA+ETNG Sbjct: 61 GRHFDTARQLALAVEQAWRGQGAGQRFVVLTGGEPLLQIDEELLEALHCLAFEIAVETNG 120 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 TI P G+DW+CVSPK + L V G ELK+V PQ G + +E L F+H LLQPMDG + Sbjct: 121 TIPTPAGIDWLCVSPKCNARLVVMAGDELKLVYPQIGAEPEHFEVLAFEHLLLQPMDGPE 180 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 ANT A+ NP+W+LS+QTHK L IP Sbjct: 181 REANTAAAVAYCLANPRWRLSLQTHKFLGIP 211 >PM0184 [O] COG0602 Organic radical activating enzymes Pmu Pasteurella multocida Length = 209 Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 38/222 (17%) Query: 3 YSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGENGG 62 Y+I EIF +LQGEG + G P++F RF CNL C +CDT + N Sbjct: 11 YAIVEIFESLQGEGFNTGMPSIFVRFGKCNL-----------ACPWCDTPY------NQY 53 Query: 63 KFKSPAELAAKIDSLWPARYAPSKYVVFTGGEP-LLQLDAALIEAMHAVGFEIAIETNGT 121 + +++ K+ S +K ++ TGGEP ++ L++A+ A G+ +AIETNG Sbjct: 54 TTWTLSKIVQKVRSF------SAKNIIITGGEPTIVPKIGVLLDALKAEGYFLAIETNGL 107 Query: 122 IDVPDGVDWICVSPKMGSELKVRR-----GSELKVVVPQPGQPLDEY--EKLDFQHFLLQ 174 +P+ +D+I SPK + K ++ E+++V + E +++ H+ L Sbjct: 108 KSIPNQIDYIATSPKRLYQHKYQQKCIPFAHEVRIVADENVIAFCEQIEQQIRADHYYLS 167 Query: 175 P------MDGLQAAANTRLAIEMVKNNPKWKLSIQTHKLLNI 210 P M+ L+ + V N PKW+LSIQTHKL+ I Sbjct: 168 PCEVNGEMNLLETITQIGRLNQRV-NKPKWQLSIQTHKLIGI 208 >HI1189 [O] COG0602 Organic radical activating enzymes Hin Haemophilus influenzae Length = 211 Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 36/222 (16%) Query: 2 TYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGENG 61 ++I EIF +LQGEG + G P+VF RF CNL C +CDT + N Sbjct: 12 NFNIVEIFESLQGEGFNTGMPSVFVRFGKCNL-----------DCPWCDTPY------NN 54 Query: 62 GKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEP-LLQLDAALIEAMHAVGFEIAIETNG 120 K S +++ K+ S SK ++ TGGEP ++ L+E + G+ +AIETNG Sbjct: 55 FKRWSVSQILEKVRSF------SSKNIIITGGEPTIVPKIEYLLEQFKSDGYFLAIETNG 108 Query: 121 TIDVPDGVDWICVSPKMGSELKVRR-----GSELKVVVPQPGQPLDEY--EKLDFQHFLL 173 +P +D+I SPK K + +E+++V+ E +K+ +++ L Sbjct: 109 LKAIPAQIDYIATSPKSLYAHKYEKRCIPFANEVRIVMDSNMPSFCELIEQKIKAKNYYL 168 Query: 174 QP--MDGLQAAANTRLAIEMVK---NNPKWKLSIQTHKLLNI 210 P +DG T + + N PKW+LS+QTHKL+ I Sbjct: 169 SPCEIDGKMNLLETITLLGQLNQRSNKPKWQLSLQTHKLIGI 210