BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0588.p (259 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2447 [H] COG0029 Aspartate oxidase Rso Ralstonia solanacearum 418 e-117 PA0761 [H] COG0029 Aspartate oxidase Pae Pseudomonas aeruginosa 361 e-100 STM2641 [H] COG0029 Aspartate oxidase Sty Salmonella typhimurium... 346 4e-95 VC2469 [H] COG0029 Aspartate oxidase Vch Vibrio cholerae 335 5e-92 nadB [H] COG0029 Aspartate oxidase Eco Escherichia coli K12 335 8e-92 >RSc2447 [H] COG0029 Aspartate oxidase Rso Ralstonia solanacearum Length = 533 Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust. Identities = 204/255 (80%), Positives = 221/255 (86%), Gaps = 1/255 (0%) Query: 1 MPEHDERAELAPRDVVARAIDFEMKKRGLDHVDLDISHQSPAFIAEHFPTIQARCQEFGI 60 MP HDERAELAPRD+VARAIDFEMKKRGLD V LDISHQSPAFI EHFPTI ARC E GI Sbjct: 269 MPAHDERAELAPRDIVARAIDFEMKKRGLDCVYLDISHQSPAFIQEHFPTILARCLELGI 328 Query: 61 DITRQPIPVVPAAHYTCGGVVTDMAGRTDLPGLYAVGETAYTGLHGANRLASNSLLECLV 120 DITRQPIPVVPAAHYTCGGVVTD GRTD+ GLYAVGETAYTGLHGANRLASNSLLEC+V Sbjct: 329 DITRQPIPVVPAAHYTCGGVVTDQLGRTDIAGLYAVGETAYTGLHGANRLASNSLLECMV 388 Query: 121 LGRAAAADIEHELAAGSWRVDEVPAWDESRVTDADEEVVIAHNWDELRRFMWNYVSIVRT 180 +GR AA DI + A +PAWDESRVTDADEEVV++HNWDELRR MWNYV IVRT Sbjct: 389 IGRGAAQDILGQPATAPTPT-PIPAWDESRVTDADEEVVVSHNWDELRRMMWNYVGIVRT 447 Query: 181 DKRLERAQHRIRLLKEEIDEYYANFRISRDLLELRNLVDVAQLIVSSALMRKESRGLHFS 240 +KRLERAQHRI LL+EEI EYYANFR+S DLLELRNLV+ A LIV SAL R ESRGLHFS Sbjct: 448 NKRLERAQHRIALLREEIAEYYANFRVSHDLLELRNLVEAASLIVDSALSRHESRGLHFS 507 Query: 241 QDYPRTLPRATPTIL 255 +DYP+TLP+A PT++ Sbjct: 508 RDYPQTLPKALPTVM 522 >PA0761 [H] COG0029 Aspartate oxidase Pae Pseudomonas aeruginosa Length = 538 Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/255 (66%), Positives = 208/255 (81%), Gaps = 1/255 (0%) Query: 1 MPEHDERAELAPRDVVARAIDFEMKKRGLDHVDLDISHQSPAFIAEHFPTIQARCQEFGI 60 MP D R ELAPRD+VARAID EMK+ G+D V LDISH+ FI HFPT+ RC +FGI Sbjct: 278 MPRFDPRGELAPRDIVARAIDHEMKRLGIDCVYLDISHKPAEFIKAHFPTVYERCLDFGI 337 Query: 61 DITRQPIPVVPAAHYTCGGVVTDMAGRTDLPGLYAVGETAYTGLHGANRLASNSLLECLV 120 DIT+QPIPVVPAAHYTCGGV+ D G TD+PGLYA+GET +TGLHGANR+ASNSLLEC V Sbjct: 338 DITQQPIPVVPAAHYTCGGVLVDQHGHTDVPGLYAIGETTFTGLHGANRMASNSLLECFV 397 Query: 121 LGRAAAADIEHELAAGSWRVDEVPAWDESRVTDADEEVVIAHNWDELRRFMWNYVSIVRT 180 R+AAAD+ L G+ + +P+WD S+VTD+DE+V+IAHNWDELRRFMW+YV IVRT Sbjct: 398 YARSAAADMLQRL-PGTPVPESLPSWDASQVTDSDEDVIIAHNWDELRRFMWDYVGIVRT 456 Query: 181 DKRLERAQHRIRLLKEEIDEYYANFRISRDLLELRNLVDVAQLIVSSALMRKESRGLHFS 240 +KRL+RAQHR+RLL EIDE+Y+N+++SRDL+ELRNL VA+LI+ SA+ R+ESRGLH++ Sbjct: 457 NKRLQRAQHRVRLLLSEIDEFYSNYKVSRDLIELRNLALVAELIIRSAMQRRESRGLHYT 516 Query: 241 QDYPRTLPRATPTIL 255 DYP LP A TIL Sbjct: 517 LDYPDLLPEARDTIL 531 >STM2641 [H] COG0029 Aspartate oxidase Sty Salmonella typhimurium LT2 Length = 540 Score = 346 bits (887), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 168/255 (65%), Positives = 203/255 (79%), Gaps = 1/255 (0%) Query: 1 MPEHDERAELAPRDVVARAIDFEMKKRGLDHVDLDISHQSPAFIAEHFPTIQARCQEFGI 60 MP+ DER ELAPRD+VARAID EMK+ G D + LDISH+ F+ +HFP I A+ + G+ Sbjct: 278 MPDVDERGELAPRDIVARAIDHEMKQLGADCMFLDISHKPDDFVRQHFPMIYAKLLDLGM 337 Query: 61 DITRQPIPVVPAAHYTCGGVVTDMAGRTDLPGLYAVGETAYTGLHGANRLASNSLLECLV 120 D+T++PIPVVPAAHYTCGGVV D GRTD+ GLYA+GE +YTGLHGANR+ASNSLLECLV Sbjct: 338 DLTKEPIPVVPAAHYTCGGVVVDDYGRTDVDGLYAIGEVSYTGLHGANRMASNSLLECLV 397 Query: 121 LGRAAAADIEHELAAGSWRVDEVPAWDESRVTDADEEVVIAHNWDELRRFMWNYVSIVRT 180 G +AA DI+ + + VD +PAWDESRV +ADE VVI HNW ELR MW+YV IVRT Sbjct: 398 YGWSAAMDIDRRMPS-VHSVDALPAWDESRVENADERVVIQHNWHELRLLMWDYVGIVRT 456 Query: 181 DKRLERAQHRIRLLKEEIDEYYANFRISRDLLELRNLVDVAQLIVSSALMRKESRGLHFS 240 KRLERA RI +L++EIDEYYANFR+S +LLELRNLV VA+LIV A+MRKESRGLHF+ Sbjct: 457 TKRLERALRRITMLQQEIDEYYANFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFT 516 Query: 241 QDYPRTLPRATPTIL 255 DYP+ L + P+IL Sbjct: 517 LDYPQQLAESGPSIL 531 >VC2469 [H] COG0029 Aspartate oxidase Vch Vibrio cholerae Length = 550 Score = 335 bits (860), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 159/255 (62%), Positives = 203/255 (79%), Gaps = 1/255 (0%) Query: 1 MPEHDERAELAPRDVVARAIDFEMKKRGLDHVDLDISHQSPAFIAEHFPTIQARCQEFGI 60 MP+ DERAELAPRD+VARAIDFEMK+ G D + LDISH+ FI +HFPTI +R + GI Sbjct: 293 MPDFDERAELAPRDIVARAIDFEMKRLGADCMYLDISHKPADFIEKHFPTIYSRLMDLGI 352 Query: 61 DITRQPIPVVPAAHYTCGGVVTDMAGRTDLPGLYAVGETAYTGLHGANRLASNSLLECLV 120 D+T++PIP+VPAAHYTCGGV+ + G+TDL LYA+GE +YTGLHGANR+ASNSLLEC+V Sbjct: 353 DMTKEPIPIVPAAHYTCGGVMVNPQGQTDLKQLYAIGEVSYTGLHGANRMASNSLLECVV 412 Query: 121 LGRAAAADIEHELAAGSWRVDEVPAWDESRVTDADEEVVIAHNWDELRRFMWNYVSIVRT 180 +A+ DI +L S + +PAWDES+VT +DEEVV+ HNW ELR FMW+Y+ IVRT Sbjct: 413 YAWSASQDIIAQLPNAS-MPESLPAWDESQVTCSDEEVVLQHNWHELRLFMWDYMGIVRT 471 Query: 181 DKRLERAQHRIRLLKEEIDEYYANFRISRDLLELRNLVDVAQLIVSSALMRKESRGLHFS 240 +KRLERA RI+LL++E EYY+NFR+S +LLE+RNL+ VA+L+V A+ RKESRGLH++ Sbjct: 472 NKRLERAMRRIQLLQQETHEYYSNFRVSNNLLEMRNLLQVAELMVRCAMQRKESRGLHYT 531 Query: 241 QDYPRTLPRATPTIL 255 DYP L + PTIL Sbjct: 532 LDYPDQLAESGPTIL 546 >nadB [H] COG0029 Aspartate oxidase Eco Escherichia coli K12 Length = 540 Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 164/258 (63%), Positives = 198/258 (76%), Gaps = 2/258 (0%) Query: 1 MPEHDERAELAPRDVVARAIDFEMKKRGLDHVDLDISHQSPAFIAEHFPTIQARCQEFGI 60 MP+ DER ELAPRD+VARAID EMK+ G D + LDISH+ FI +HFP I + GI Sbjct: 278 MPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGI 337 Query: 61 DITRQPIPVVPAAHYTCGGVVTDMAGRTDLPGLYAVGETAYTGLHGANRLASNSLLECLV 120 D+T++P+P+VPAAHYTCGGV+ D GRTD+ GLYA+GE +YTGLHGANR+ASNSLLECLV Sbjct: 338 DLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLV 397 Query: 121 LGRAAAADIEHELAAGSWRVDEVPAWDESRVTDADEEVVIAHNWDELRRFMWNYVSIVRT 180 G +AA DI + + +P WDESRV + DE VVI HNW ELR FMW+YV IVRT Sbjct: 398 YGWSAAEDITRRMPYAH-DISTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRT 456 Query: 181 DKRLERAQHRIRLLKEEIDEYYANFRISRDLLELRNLVDVAQLIVSSALMRKESRGLHFS 240 KRLERA RI +L++EIDEYYA+FR+S +LLELRNLV VA+LIV A+MRKESRGLHF+ Sbjct: 457 TKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFT 516 Query: 241 QDYPRTLPRATPTIL-PG 257 DYP L + P+IL PG Sbjct: 517 LDYPELLTHSGPSILSPG 534