BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0584.p         (84 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF1590 [R] COG4691 Plasmid stability protein Xfa Xylella fastidi...   115   2e-26

>XF1590 [R] COG4691 Plasmid stability protein Xfa Xylella fastidiosa 9a5c
          Length = 86

 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/84 (64%), Positives = 67/84 (79%)

Query: 1  MATVTVRNLPDEVHRALRVRAAQHGRSTEAEIREILTLAVRPAGQLRLGDALAAMSRELG 60
          MA +TVRNLPDEVHRALRVRAA HGRSTEAE+REILT  V+P  ++R+GDALA + RE+G
Sbjct: 3  MAMLTVRNLPDEVHRALRVRAATHGRSTEAEVREILTNMVKPDERVRIGDALATLGREIG 62

Query: 61 LSNEDVEALQQTRERAPAQPMSFE 84
          L+NED     + R++  A+PM FE
Sbjct: 63 LNNEDFTTFDKVRDKTQAEPMRFE 86