BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0562.p (215 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl980GM [E] COG0765 ABC-type amino acid transport system, perme... 208 9e-54 AGc2581 [E] COG0765 ABC-type amino acid transport system, permea... 192 4e-49 AGc2569 [E] COG0765 ABC-type amino acid transport system, permea... 184 1e-46 RSc2105 [E] COG0765 ABC-type amino acid transport system, permea... 177 1e-44 SMa0081 [E] COG0765 ABC-type amino acid transport system, permea... 176 2e-44 >AGl980GM [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 111/207 (53%), Positives = 154/207 (74%), Gaps = 5/207 (2%) Query: 6 LLSLLQGAWGTVLLSGLTLLLGGMAGLALALARVSALRPLRRLAAAWIQLIQGTPLLVLM 65 LL+ LQ W TVLL+ + L+ GG+ G +ALAR S + LR A +IQ+IQG P+L+++ Sbjct: 14 LLTALQ--W-TVLLTIIALVGGGIVGFFIALARTSDNKLLRIAAGTYIQVIQGIPVLMIL 70 Query: 66 GVCFYGPALAGVGTVEVLPAAATAMLIYASAFLGEIWRGCIQSVHKSQWEAAECIGLSRW 125 + +YG +LAG+ + L AA +M IY S +L EIWRGCIQ+V K QWEA+E + L+R Sbjct: 71 FLSYYGLSLAGL-ELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESLALTRA 129 Query: 126 QRMRMIVLPQALRMATPPTVGFAVQVIKNTSVASLVIGFAELSYNAKVLNNSTFQPFLYF 185 Q+ R ++LPQA+R++ PPTVGFAVQV+KNTS+AS +IGF EL+ +++NN+TFQPF F Sbjct: 130 QQYRYVILPQAIRISLPPTVGFAVQVVKNTSIAS-IIGFVELARAGQLINNATFQPFRVF 188 Query: 186 GSAALLYFAMCYPLSRWSRALERKLHA 212 + A+LYF +CYPLS+ SR LER+LHA Sbjct: 189 VAVAVLYFIVCYPLSQLSRWLERRLHA 215 >AGc2581 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 217 Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 98/211 (46%), Positives = 146/211 (69%), Gaps = 2/211 (0%) Query: 5 QLLSLLQGAWGTVLLSGLTLLLGGMAGLALALARVSALRPLRRLAAAWIQLIQGTPLLVL 64 + L LL+GA +++L+ + +G + G A+ R+S +R +AA +I +IQ P+L++ Sbjct: 8 EFLFLLRGAGWSIVLTAIAFSIGSLTGGFFAIMRLSQYGSVRNVAAGYITVIQSIPVLMI 67 Query: 65 MGVCFYGPALAGVGTVEVLPAAATAMLIYASAFLGEIWRGCIQSVHKSQWEAAECIGLSR 124 + + +YG L G + L AA+ ++ +Y SA+L EIWRG IQ+V K QWEA+ + L+R Sbjct: 68 LFMSYYGLTLFGF-EIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASASLALTR 126 Query: 125 WQRMRMIVLPQALRMATPPTVGFAVQVIKNTSVASLVIGFAELSYNAKVLNNSTFQPFLY 184 +Q+ R ++LPQALR++ PPTVGF VQ++KNTS+ S V+GF ELS +++NN+TF+PF Sbjct: 127 FQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVS-VVGFVELSRAGQLVNNATFRPFQV 185 Query: 185 FGSAALLYFAMCYPLSRWSRALERKLHAHRR 215 F ALLYFA+C+PLSR SR LER LH R Sbjct: 186 FFVVALLYFAICFPLSRLSRHLERVLHVGRN 216 >AGc2569 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 103/208 (49%), Positives = 143/208 (68%), Gaps = 4/208 (1%) Query: 9 LLQGAWGTVLLSGLTLLLGGMAGLALALARVSALRPLRRLAAAWIQLIQGTPLLVLMGVC 68 LL W TVLLS ++ GG+ L L R+S + +R A +++L QGTPLL+ + + Sbjct: 14 LLATRW-TVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTPLLMQLFIA 72 Query: 69 FYGPALAGVGTVEVLPAAATAMLIYASAFLGEIWRGCIQSVHKSQWEAAECIGLSRWQRM 128 F+G L G+ V AA ++++A+AFL EIWRGC++SV K QWEA+ + + R Q+M Sbjct: 73 FFGLGLVGID-VPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQM 131 Query: 129 RMIVLPQALRMATPPTVGFAVQVIKNTSVASLVIGFAELSYNAKVLNNSTFQPFLYFGSA 188 R ++LPQA+R+A PPTVGF VQVIK T+V S +IGF ELS V+ N+TFQPF +G Sbjct: 132 RYVILPQAMRVAIPPTVGFFVQVIKGTAVTS-IIGFVELSKAGTVVTNATFQPFTVYGLV 190 Query: 189 ALLYFAMCYPLSRWSRALERKLH-AHRR 215 AL+YFA+C+PLS+ S+ LERKL+ AHR Sbjct: 191 ALIYFALCWPLSKSSQILERKLNVAHRN 218 >RSc2105 [E] COG0765 ABC-type amino acid transport system, permease component Rso Ralstonia solanacearum Length = 217 Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 90/191 (47%), Positives = 135/191 (70%), Gaps = 6/191 (3%) Query: 26 LGGMAGLALALARVSALRPLRRLAAAWIQLIQGTPLLVLMGVCFYGPALAGVGTVEVLP- 84 LGG AGLA+ ARV L+R++ +IQ+ Q TPLL+ M + F+G ++AG+ E+ P Sbjct: 31 LGGAAGLAVLFARVGRNAGLQRVSQVYIQIFQNTPLLMQMFLVFFGASMAGL---EMSPW 87 Query: 85 -AAATAMLIYASAFLGEIWRGCIQSVHKSQWEAAECIGLSRWQRMRMIVLPQALRMATPP 143 AAA + +Y SA+L E+WRGC++++ + QWEA+ + + +Q+MR +VLPQA+RM+ P Sbjct: 88 TAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASASLAMGYFQQMRHVVLPQAVRMSIAP 147 Query: 144 TVGFAVQVIKNTSVASLVIGFAELSYNAKVLNNSTFQPFLYFGSAALLYFAMCYPLSRWS 203 TVGF+VQ++K T+VAS +IGF +L+ VL N+TFQPFL +G + Y A+C+PLS + Sbjct: 148 TVGFSVQIVKGTAVAS-IIGFEDLTKLGSVLANATFQPFLIYGLVGMAYLALCWPLSLCA 206 Query: 204 RALERKLHAHR 214 LE+KL+A R Sbjct: 207 SHLEKKLYAAR 217 >SMa0081 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 95/207 (45%), Positives = 137/207 (66%), Gaps = 2/207 (0%) Query: 4 EQLLSLLQGAWGTVLLSGLTLLLGGMAGLALALARVSALRPLRRLAAAWIQLIQGTPLLV 63 + L ++ A T+ LS + G + GL +AL RVS R LR A +I++ QGTPLL+ Sbjct: 8 NEFLVIVAAAQWTIALSAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVFQGTPLLM 67 Query: 64 LMGVCFYGPALAGVGTVEVLPAAATAMLIYASAFLGEIWRGCIQSVHKSQWEAAECIGLS 123 + + F+G + G + AA A+ ++ASAFLGEIWRGCI++V K Q EAA +GL Sbjct: 68 QLFLVFFGMNIFGFA-INPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLR 126 Query: 124 RWQRMRMIVLPQALRMATPPTVGFAVQVIKNTSVASLVIGFAELSYNAKVLNNSTFQPFL 183 ++ MR ++LPQA R+A PTVGF VQ+IK TS+AS +IGF EL+ +++NN+TF PFL Sbjct: 127 YFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLAS-IIGFTELTRQGQIINNATFSPFL 185 Query: 184 YFGSAALLYFAMCYPLSRWSRALERKL 210 FG+ A +YF +C+PLS +R +E + Sbjct: 186 VFGTVAAVYFLLCWPLSLIARRMETRF 212