BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0557.p         (155 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3222 [S] COG3501 Uncharacterized protein conserved in bacteri...   113   2e-25
RSp0518_1 [S] COG3501 Uncharacterized protein conserved in bacte...   105   4e-23

>RSc3222 [S] COG3501 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 547

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 78/120 (65%), Gaps = 1/120 (0%)

Query: 1   LLEGMQVQLTCVSTDPDLPLHTLLGQPLGVEMVTDRGRLHHTNGLITDACAGHADGALRV 60
           L  G+Q Q+ C+S  PDLP   LLG P+ +++ T+ G L+  NG+ITD  +G +DG L  
Sbjct: 43  LCAGLQAQVICLSEHPDLPQQDLLGVPVSIQLATNEGVLYPINGVITDIQSGQSDGTLTS 102

Query: 61  YQLTMRDALSIMEGRVNTRIFRRLSVPSILEILLSEWRQRSSTLAAAFKFDLDGLDDTRY 120
           Y+LT+ DA+S+M GR N R F   SVP ILE +L EW+QRS+ +   F F+L  LD  RY
Sbjct: 103 YRLTVGDAMSLMRGRRNMRTFVGKSVPEILETMLGEWQQRSAAMDRVFDFELL-LDRGRY 161


>RSp0518_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 586

 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 73/112 (65%)

Query: 1   LLEGMQVQLTCVSTDPDLPLHTLLGQPLGVEMVTDRGRLHHTNGLITDACAGHADGALRV 60
           +  G++ Q+ C+S   DL    LLG P+ +++ TD G LH  NG+++D  +G  DG L  
Sbjct: 47  ICAGLEAQVVCLSERADLSRDELLGLPVSIQVATDGGALHAINGIVSDVHSGAFDGTLAS 106

Query: 61  YQLTMRDALSIMEGRVNTRIFRRLSVPSILEILLSEWRQRSSTLAAAFKFDL 112
           Y+LT+ DA+S+M  R N RIF   SVP IL ILL+EW+QRS+ L  AF+F L
Sbjct: 107 YRLTIIDAMSLMRRRRNMRIFVGKSVPDILGILLAEWQQRSAILGQAFRFQL 158