BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0548.p         (167 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMa1867 [K] COG1522 Transcriptional regulators Sme Sinorhizobium...   160   1e-39
AGl2816 [K] COG1522 Transcriptional regulators Atu Agrobacterium...   159   4e-39
mlr7030 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium...   158   6e-39
mll7129 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium...   132   5e-31
SMb20425 [K] COG1522 Transcriptional regulators Sme Sinorhizobiu...   130   1e-30

>SMa1867 [K] COG1522 Transcriptional regulators Sme Sinorhizobium meliloti
          Length = 158

 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 72/150 (48%), Positives = 104/150 (69%)

Query: 7   IDRTDIKILEHLQREGRCSNVELAEAINLSPSPCLTRTKRLEETGVIASYAAQVALDKLG 66
           +DR DIKIL  LQ+ GR +NVELAE +NLSPSPCL R K+L+  G I  Y+AQ+ + KLG
Sbjct: 3   LDRIDIKILYELQKNGRITNVELAELVNLSPSPCLMRVKKLQSEGYIDGYSAQINVGKLG 62

Query: 67  SHVVVFSEITLSSHRPADFRKFEQGAARYAEIVECYNVSGGYDYLLKIISPTVGMFQELM 126
             + VF+EITL +HR  DF +F     +  +++EC+ VSGGYDYLLK ++  +  +Q +M
Sbjct: 63  QTLTVFTEITLKNHRQIDFARFLAAIEKVDQVIECHLVSGGYDYLLKFVTAGINEYQTIM 122

Query: 127 ERLLEDEIGIEKFASRIVLRHPYERRAEPV 156
           ERL + ++GI+K+ S +VL+ P  +   P+
Sbjct: 123 ERLTDMDVGIDKYFSFVVLKSPIVKAHMPL 152


>AGl2816 [K] COG1522 Transcriptional regulators Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 215

 Score =  159 bits (401), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/150 (48%), Positives = 105/150 (70%)

Query: 7   IDRTDIKILEHLQREGRCSNVELAEAINLSPSPCLTRTKRLEETGVIASYAAQVALDKLG 66
           +DR DIKIL  LQ+ GR +NVELAE +NLSPSPCL R K+L+  G I  Y+AQ+ ++KLG
Sbjct: 60  LDRIDIKILYELQKNGRITNVELAELVNLSPSPCLMRVKKLQSEGYIEGYSAQININKLG 119

Query: 67  SHVVVFSEITLSSHRPADFRKFEQGAARYAEIVECYNVSGGYDYLLKIISPTVGMFQELM 126
             + VF+EITL +HR  DF +F     +  ++VEC+ VSGGYDYLLK ++  +  +Q +M
Sbjct: 120 QTLTVFTEITLKNHRQIDFARFLGVVEKIDQVVECHLVSGGYDYLLKFVTSGIVEYQSIM 179

Query: 127 ERLLEDEIGIEKFASRIVLRHPYERRAEPV 156
           ERL + ++GI+K+ S +VL+ P  +   P+
Sbjct: 180 ERLTDMDVGIDKYFSFVVLKSPIIKSHMPL 209


>mlr7030 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 169

 Score =  158 bits (399), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 105/153 (68%)

Query: 4   TDPIDRTDIKILEHLQREGRCSNVELAEAINLSPSPCLTRTKRLEETGVIASYAAQVALD 63
           T  +DR DIKIL  LQ+ GR +NVELAE ++LSPSPCL R KRL+  G I  Y+AQ+ + 
Sbjct: 11  TVKLDRIDIKILYELQKNGRITNVELAELVHLSPSPCLMRVKRLQSEGYIEGYSAQINIG 70

Query: 64  KLGSHVVVFSEITLSSHRPADFRKFEQGAARYAEIVECYNVSGGYDYLLKIISPTVGMFQ 123
           KLG  + VF+EITL +HR  DF +F     +  +++EC+ VSGGYDYL+K ++  +  +Q
Sbjct: 71  KLGQTLTVFTEITLKNHRQVDFARFLAVVEKIDQVIECHLVSGGYDYLMKFVTAGIAEYQ 130

Query: 124 ELMERLLEDEIGIEKFASRIVLRHPYERRAEPV 156
            +MERL + +IGI+K+ S +VL+ P  +   P+
Sbjct: 131 TIMERLTDMDIGIDKYFSFVVLKSPIVKAHMPL 163


>mll7129 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 163

 Score =  132 bits (331), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 100/150 (66%)

Query: 7   IDRTDIKILEHLQREGRCSNVELAEAINLSPSPCLTRTKRLEETGVIASYAAQVALDKLG 66
           +D  D+KIL+ +QR+GR + + LAE + LSP+PC  R ++LE+ G+++ Y A++A+  + 
Sbjct: 6   LDAIDLKILDAIQRDGRITKLALAEQVGLSPTPCWMRLRKLEKAGIVSGYHARIAMRVVA 65

Query: 67  SHVVVFSEITLSSHRPADFRKFEQGAARYAEIVECYNVSGGYDYLLKIISPTVGMFQELM 126
               V  E+TL+SHR ADF +FE+      EIV C++V GG DY+LK+++  +  +Q L+
Sbjct: 66  PVATVLMEVTLASHRQADFDRFERVIRDIPEIVACWSVGGGVDYVLKVMARDIDAYQRLV 125

Query: 127 ERLLEDEIGIEKFASRIVLRHPYERRAEPV 156
           + LL+ EIGI+++ + IV +   E  A P+
Sbjct: 126 DGLLDREIGIDRYFTYIVTKTVKEEIALPI 155


>SMb20425 [K] COG1522 Transcriptional regulators Sme Sinorhizobium meliloti
          Length = 164

 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 96/149 (64%)

Query: 7   IDRTDIKILEHLQREGRCSNVELAEAINLSPSPCLTRTKRLEETGVIASYAAQVALDKLG 66
           +D  D++ILE +Q +GR + + LAE   LSP+PC  R ++LE+ G++  Y A+VAL ++ 
Sbjct: 3   LDAIDLRILEAIQADGRITKLALAEKAGLSPTPCWMRLRKLEKAGIVTGYHARVALRRVA 62

Query: 67  SHVVVFSEITLSSHRPADFRKFEQGAARYAEIVECYNVSGGYDYLLKIISPTVGMFQELM 126
               V  E+TL +HR ADF +FE+  A   EIV C++V GG DY+LKI++  +  +Q L+
Sbjct: 63  PVASVMMEVTLGNHRQADFDRFERAIAAIPEIVACWSVGGGVDYILKIMTADIDAYQRLV 122

Query: 127 ERLLEDEIGIEKFASRIVLRHPYERRAEP 155
           + LLE E+GI+++ + IV +   E    P
Sbjct: 123 DGLLERELGIDRYFTYIVTKTVKEETVLP 151