BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0499.p         (178 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MK0895 [C] COG1032 Fe-S oxidoreductase Mka Methanopyrus kandleri...    61   1e-09
MK0992 [C] COG1032 Fe-S oxidoreductase Mka Methanopyrus kandleri...    59   7e-09

>MK0895 [C] COG1032 Fe-S oxidoreductase Mka Methanopyrus kandleri AV19
          Length = 457

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 10/151 (6%)

Query: 1   VKRAGVNWLALGVEAGNQMVRQEVSKGSFKEVNIRDVC---KIINDADINIISNYIFGFP 57
           ++  G   + +G E+ +    + ++KG    + ++DV    K+     + I+ ++I GFP
Sbjct: 285 IREHGCRTVYVGAESASNETLKRINKG----ITVQDVIACRKVAKRHGLRILLSFILGFP 340

Query: 58  DDTRETMQETLDLALELNTEMANMYPCQALPGSPMYYTAKKNGWALPDSYEGYAFLSYES 117
            + RE +  T+  A  L  +      C   PG+P+Y  AK+ G      +  Y  +    
Sbjct: 341 WEDREDVFRTIKFARRLEPDYVQFTVCTPYPGTPLYDLAKERGLIEVHDWSKYTTV---D 397

Query: 118 QPLPTKHMSAAEVLKFRDEAWRTYFTNPDYL 148
             + T+H+S  E+ +    A+ +++ NP YL
Sbjct: 398 PVMRTEHLSTRELGRLLQRAYLSFYLNPRYL 428


>MK0992 [C] COG1032 Fe-S oxidoreductase Mka Methanopyrus kandleri AV19
          Length = 483

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 4/148 (2%)

Query: 1   VKRAGVNWLALGVEAGNQMVRQEVSKGSFKEVNIRDVCKIINDADINIISNYIFGFPDDT 60
           ++ AG + L  GVE+G+Q V   V KG F     +   ++  + DI  +++ + G P +T
Sbjct: 293 MREAGCSVLFFGVESGSQEVLDNVGKG-FTVEQTKKAFQLCREFDIVTVASAVIGLPGET 351

Query: 61  RETMQETLDLALELNTEMANMYPCQALPGSPMYYTAKKNGWALPDSYEGYAFLSYESQPL 120
             + ++T+    E++ + A +      PG+  Y  A + G     S++ Y  +      +
Sbjct: 352 HRSARQTIKFLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDKYTLM---DPVV 408

Query: 121 PTKHMSAAEVLKFRDEAWRTYFTNPDYL 148
            T  +S  EV K++  A   ++  P YL
Sbjct: 409 RTTELSPEEVKKYQKRAMIEFYLRPRYL 436