BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0492.p (250 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value lin1062 [GM] COG1682 ABC-type polysaccharide/polyol phosphate ex... 119 8e-27 CAC2329 [GM] COG1682 ABC-type polysaccharide/polyol phosphate ex... 107 2e-23 PA5451 [GM] COG1682 ABC-type polysaccharide/polyol phosphate exp... 103 4e-22 BS_tagG [GM] COG1682 ABC-type polysaccharide/polyol phosphate ex... 103 5e-22 SA0594 [GM] COG1682 ABC-type polysaccharide/polyol phosphate exp... 98 1e-20 >lin1062 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Lin Listeria innocua Length = 267 Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 5/253 (1%) Query: 1 MIRVLALRDFQSRYAGTVAGSLWTVAHPIAIVTVFYFVFSIGFKSKAPDNVPFILWFAVG 60 MI +A + ++ Y G W + +P+ + ++YFVF G +K+ + +I W G Sbjct: 17 MIFRIARYEDKATYQSHYLGLAWQILNPLIQIAIYYFVFGFGMNAKSGSDASYIEWMLAG 76 Query: 61 LMAWFYFNDGLQAIANSITGNPHLVKKTVFPVEVLAVVQIVSALLPHLAFLAVVTVVLLF 120 ++ WF+ + + ANSI +V K FP+ +L + IVS L + + ++ +L Sbjct: 77 IIPWFFISAVILQGANSIYNKIGMVSKMNFPMSILPNITIVSNLTSYFTMMVILLGLLAL 136 Query: 121 NEIPLEAFRLQVFYFMLCTTVLLLGLGWLISALQVFYRDISQALTIILNLWFWATPIVWD 180 N P+ + Q Y+ + L + + + V RD L ++ + F+ T IVW+ Sbjct: 137 NGTPVTIYWGQYLYYFVAMIAFLFSVTLFNATISVLVRDYYIMLQSVMRVLFYVTGIVWN 196 Query: 181 SKMMPPEYNW---IFVFNPMHYVVDGYRGMLIYAQPKWPDSTETMIFWTITLGMLALGSV 237 + M P+ W + NP++YVV+G+R + + W + TM FW ITL +L +G+ Sbjct: 197 LETMLPQ--WLVHLLKLNPIYYVVNGFRETFLMNRGFWESPSYTMYFWLITLTLLFVGAT 254 Query: 238 VFRRLKPEFADVL 250 + + + F D L Sbjct: 255 LHMKFRERFVDYL 267 >CAC2329 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Cac Clostridium acetobutylicum Length = 258 Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 127/248 (51%), Gaps = 5/248 (2%) Query: 1 MIRVLALRDFQSRYAGTVAGSLWTVAHPIAIVTVFYFVFSIGFKSKAPDNVPFILWFAVG 60 +++ L +++ + +Y + G W+ +PI ++ V+ F F P+ + + Sbjct: 14 LLQNLTMKELKLKYRNSALGFFWSFLNPIMLLIVYTFAFKYIMHQTTPN---YTVTLLAA 70 Query: 61 LMAWFYFNDGLQAIANSITGNPHLVKKTVFPVEVLAVVQIVSALLPHLAFLAVVTVVLLF 120 L+ W +F +Q SI N +L+KK FP +++ + I S + L L ++ ++ Sbjct: 71 LLPWQFFQGAVQGSTTSIISNSNLIKKIYFPRQIMPLSIIFSNFVSFLITLVILFGAMIV 130 Query: 121 NEIPLEAFRLQVFYFMLCTTVLLLGLGWLISALQVFYRDISQALTIILNLWFWATPIVWD 180 +++P L + +L V +GL ++S+L V YRD+S + ++ LWF+ TPIV+ Sbjct: 131 SQVPFSFTILLLPIILLLLLVFSVGLSLILSSLNVLYRDVSHFVEVLFMLWFYLTPIVYV 190 Query: 181 SKMMPPEYNWIFVFNPMHYVVDGYRGMLIYAQPKWPDSTETMIFWTITLGMLALGSVVFR 240 +P Y I + NPM +V+ R +L+ + P ++ W I L L +G +FR Sbjct: 191 LDRIPILYKNILLINPMTMIVECIRSVLLEGKMPNPFYIVVILVWDIVL--LYVGDRIFR 248 Query: 241 RLKPEFAD 248 +++ +FA+ Sbjct: 249 KIENDFAE 256 >PA5451 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Pae Pseudomonas aeruginosa Length = 265 Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 6/215 (2%) Query: 8 RDFQSRYAGTVAGSLWTVAHPIAIVTVFYFVFSIGFKSKAP---DNVPFILWFAVGLMAW 64 R+FQSRY G++ G+LWTV +P++++ V+ +FS +++ P D + + ++ GL+ W Sbjct: 22 REFQSRYRGSLFGALWTVLNPLSMIVVYTVIFSQVMRARLPGVDDGLAYSVYLCAGLLTW 81 Query: 65 FYFNDGLQAIANSITGNPHLVKKTVFPVEVLAVVQIVSALLPHLAFLAVVTVVLLFNEIP 124 F + + N +L+KK FP L V+ +++A + + A + + + L Sbjct: 82 GLFAEITSRSQSMFIENANLLKKISFPRICLPVIVLLNAGV-NFAIILALFLGFLALSGR 140 Query: 125 LEAFRLQVFYFMLCTTVLLL-GLGWLISALQVFYRDISQALTIILNLWFWATPIVWDSKM 183 L L +L VL GLG ++ L VF+RD+ Q I L WFW TPIV+ + Sbjct: 141 LPGAALLALVPLLAIQVLFAAGLGMILGVLNVFFRDVGQLFGICLQFWFWLTPIVYPIGI 200 Query: 184 MPPEYNWIFVFNPMHYVVDGYRGMLIYAQ-PKWPD 217 +P + NPM ++ Y+ + ++ Q P WP Sbjct: 201 LPEGIRSLIELNPMTALMRSYQQLFLHGQWPDWPS 235 >BS_tagG [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Bsu Bacillus subtilis Length = 275 Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 9/259 (3%) Query: 1 MIRVLALRDFQSRYAGTVAGSLWTVAHPIAIVTVFYFVFSIGFKSKAP-----DNVPFIL 55 +I LA + +S+Y G LW +P+ + ++FVF +G + P VPFI+ Sbjct: 17 LILRLAAYETKSKYQMNYLGVLWQFLNPLIQMLAYWFVFGMGIRKGGPVTTGAGEVPFII 76 Query: 56 WFAVGLMAWFYFNDGLQAIANSITGNPHLVKKTVFPVEVLAVVQIVSALLPHLAFLAVVT 115 W GL+ WF+ + + +NS+ ++V K FP+ L V I S L ++ + + Sbjct: 77 WMLAGLIPWFFISPTILDGSNSVFKRINMVAKMNFPISSLPSVAIASNLFSYMIMMVIYI 136 Query: 116 VVLLFNEIPLEAFRLQVFYFMLCTTVLLLGLGWLISALQVFYRDISQALTIILNLWFWAT 175 +VLL N + LQ Y+ +C + S + V RD L + L F+ Sbjct: 137 IVLLVNGVFPSVHWLQYIYYFICMIAFMFSFSLFNSTISVLIRDYQFLLQAVTRLLFFLL 196 Query: 176 PIVWDSK----MMPPEYNWIFVFNPMHYVVDGYRGMLIYAQPKWPDSTETMIFWTITLGM 231 PI WD PE + NP+ Y+++G+R + + D T+ FW T + Sbjct: 197 PIFWDVNAKLGQSHPELVPVLKLNPLFYIIEGFRNSFLDGAWFFHDMKYTLYFWLFTFLL 256 Query: 232 LALGSVVFRRLKPEFADVL 250 L +GS++ + + +F D L Sbjct: 257 LLVGSILHMKFRDKFVDFL 275 >SA0594 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Sau Staphylococcus aureus N315 Length = 277 Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 14/240 (5%) Query: 20 GSLWTVAHPIAIVTVFYFVFSIGFKSKAP-DNVPFILWFAVGLMAWFYFNDGLQAIANSI 78 G W + +P+ + V++ VF +G +S AP VPF+ W VG+ WF+ N G+ +I Sbjct: 43 GVAWELINPVMQIMVYWMVFGLGIRSNAPIHGVPFVYWLLVGISMWFFINQGILEGTKAI 102 Query: 79 TGNPHLVKKTVFPVEVLAVVQIVSALLPHLAFLAVVTVVLLFNEIPLEAFRLQV-----F 133 T + V K FP+ ++ + S HL L +V + +F I +Q+ F Sbjct: 103 TQKFNQVSKMNFPLSIIPTYIVTSRFYGHLGLLLLVIIACMFTGIYPSIHIIQLLIYVPF 162 Query: 134 YFMLCTTVLLLGLGWLISALQVFYRDISQALTIILNLWFWATPIVW--DSKMMPPEYNWI 191 F L +V L L S L V RD + IL + F+ +PI+W + + + + Sbjct: 163 CFFLTASVTL-----LTSTLGVLVRDTQMLMQAILRILFYFSPILWLPKNHGISGLIHEM 217 Query: 192 FVFNPMHYVVDGYRGMLIYAQPKWPDSTETMIF-WTITLGMLALGSVVFRRLKPEFADVL 250 +NP++++V+ YR ++Y + + D + M++ + I A+G+ + + + +FAD L Sbjct: 218 MKYNPVYFIVESYRAAILYHEWYFMDHWKLMLYNFGIVAIFFAIGAYLHMKYRDQFADFL 277