BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0491.p (460 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1386 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tra... 251 4e-66 PA5450 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tra... 243 9e-64 all0916 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tr... 229 1e-59 slr0982 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tr... 229 1e-59 CAC2328 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tr... 229 1e-59 >PA1386 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 422 Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 115/237 (48%), Positives = 169/237 (71%) Query: 8 DQPVIAVKNVSKKFRLFSTAKERLAEALHPLRKQYHKEFWALRDVSFEVGRGEIVGILGR 67 + PV+A ++SK FR++ +R+ +A+ RK+++ EFWALR+VSF+V GE+VG++G Sbjct: 4 NAPVLAAVDISKGFRVYRAPHQRMLQAIWGERKKFYSEFWALRNVSFQVFPGEVVGVIGC 63 Query: 68 NGSGKSTLLQIICGVMQASSGRVRVKGRISALLELGAGFNPEFTGRENVILNGAIHGFSR 127 NGSGKSTLLQI+ G ++ +SG+V R++ALLELGAGFN E+TGREN+I N + G Sbjct: 64 NGSGKSTLLQILAGTLRPTSGQVVRPERVAALLELGAGFNMEYTGRENIIFNAMLLGLGE 123 Query: 128 KQMLERMDEIEAFADIGEFFDQPIKLYSSGMFVRVAFAAAIHVEPEILVVDEALSVGDSK 187 +++ ER+DEI FADIGEF D+P++ YSSGMFVR+AF+ A +V+ ++L+VDEAL+VGD+ Sbjct: 124 QEISERLDEIIQFADIGEFIDRPVRTYSSGMFVRLAFSIAAYVDADVLIVDEALAVGDAA 183 Query: 188 FQHRCFQRIRSFMEAGKTILVVSHSTDTLLRICDRGVVMDKGEMVLVGDIASAVNRY 244 FQ +C R+ + G TIL+VSH + C R + + KG ++ GD +A Y Sbjct: 184 FQFKCLNRLEELLLKGITILLVSHDIQLIKSYCSRAIYLSKGRVIFDGDCETATELY 240 >PA5450 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 421 Score = 243 bits (619), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 145/411 (35%), Positives = 217/411 (52%), Gaps = 40/411 (9%) Query: 12 IAVKNVSKKFRLFSTAKERLAEALHPLRKQYHKEFWALRDVSFEVGRGEIVGILGRNGSG 71 I V + K ++ + RL E L P H W LR+V F + GE VGI+G NG+G Sbjct: 4 IRVSGLGKAYKQYPNRWSRLFEWLVPFSPPRHHLHWILREVEFTIEPGEAVGIVGVNGAG 63 Query: 72 KSTLLQIICGVMQASSGRVRVKGRISALLELGAGFNPEFTGRENVILNGAIHGFSRKQML 131 KSTLL++I G Q + G +RV GR++ALLELG GF+P+FTGR+NV + G + G +++ Sbjct: 64 KSTLLKMIAGTTQPTCGEIRVAGRVAALLELGMGFHPDFTGRQNVFMAGQLLGMQVEEIQ 123 Query: 132 ERMDEIEAFADIGEFFDQPIKLYSSGMFVRVAFAAAIHVEPEILVVDEALSVGDSKFQHR 191 M +IEAFA+IGE +QP++ YSSGM +R+AF+ A P+IL+VDEALSVGD+ FQH+ Sbjct: 124 ALMPDIEAFAEIGEAIEQPVRTYSSGMQMRLAFSVATARRPDILIVDEALSVGDAYFQHK 183 Query: 192 CFQRIRSFMEAGKTILVVSHSTDTLLRICDRGVVMDKGEMVLVGDIASAVNRYHQILFGT 251 F+RIRSF +AG T+L+VSH + ICD +++++G M + G ++ Y+ +L Sbjct: 184 SFERIRSFRKAGTTLLIVSHDRSAIQSICDSAILLEQGRMAMRGRPEEVMDYYNALL--- 240 Query: 252 KSAAGNPPRAALSTVGSANTASADRPAKDGAPRSLDAGRTDRIASRPDYNAHENRMGSGK 311 G R + G T S G+G+ Sbjct: 241 AEREGQTVRQEMLADGQVRTIS----------------------------------GTGE 266 Query: 312 ACIIDFDLVS--DGVLNPSEIPTHSRCELIVKLRCDEDVTVSVGFAIVSLDGTYVSGTNL 369 A I+D +V L E+ E+ V++R D + + +GF I G + G N Sbjct: 267 AAILDVRMVDQRQRALEVVEVGQAVTLEVEVEVRQDIERLI-LGFMIKDRLGQPMYGINT 325 Query: 370 VMLEQPLIVLQAGQCVALKFHFQAAVAGGEYFLNLGCNEFVDGEDRFVDVR 420 L++ L L+AG+ + +F F + G Y + L + DR + R Sbjct: 326 HRLDKALTDLKAGERITYRFAFDMRLGKGHYSVALSLSRLDSHLDRNFEWR 376 >all0916 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component Nos Nostoc sp. PCC 7120 Length = 426 Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 115/278 (41%), Positives = 180/278 (64%), Gaps = 18/278 (6%) Query: 11 VIAVKNVSKKFRLFSTAKERLAEALHPLRKQY-----------HKEFWALRDVSFEVGRG 59 +I+V NVSKKF K+ L L + + KEFWAL+DVSF++ RG Sbjct: 20 LISVDNVSKKF--CRDLKKSLLYGLQDITAELSGGNRNSDTLRRKEFWALKDVSFQLRRG 77 Query: 60 EIVGILGRNGSGKSTLLQIICGVMQASSGRVRVKGRISALLELGAGFNPEFTGRENVILN 119 E +G++G NG+GKSTLL+II G+++ +G V+V+GR++ L+ LGAGFNP TGREN+ N Sbjct: 78 EALGLVGSNGAGKSTLLRIISGLIKPDTGSVKVRGRVAPLIALGAGFNPILTGRENIYAN 137 Query: 120 GAIHGFSRKQMLERMDEIEAFADIGEFFDQPIKLYSSGMFVRVAFAAAIHVEPEILVVDE 179 AI G S K++ ER E+ F++IG+ D P++ YSSGM R+ FA A+HVEP+IL++DE Sbjct: 138 MAILGLSTKKIAERFQEVIDFSEIGDAIDAPVQTYSSGMAARLGFACAVHVEPDILLIDE 197 Query: 180 ALSVGDSKFQHRCFQRIRSFMEAGKTILVVSHSTDTLLRICDRGVVMDKGEMVLVGDIAS 239 L+VGD+KF+ +C +++ E G ++VSH++ ++L +CD + + KG+++ G+ + Sbjct: 198 VLAVGDTKFKIKCHRKLAQLRENGTAFILVSHNSHSILNVCDSSIYLSKGQLITSGETEA 257 Query: 240 AVNRYHQ--ILFGTKSAAGN---PPRAALSTVGSANTA 272 + +Y + L GT+SA G P + ++G + TA Sbjct: 258 VIRKYEEDLCLSGTESALGKMILPEKPQAKSLGLSITA 295 >slr0982 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component Syn Synechocystis Length = 430 Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/258 (43%), Positives = 173/258 (67%), Gaps = 19/258 (7%) Query: 6 MNDQPVIAVKNVSKKFRL-------FSTAKERLAEALHPLRKQY----------HKEFWA 48 M+D VI V+N+ KK+ + ++T ++ +AE + + H+EFWA Sbjct: 1 MSDT-VIRVENLGKKYIIGHQRRERYTTLRDMMAEKARSFGQMFRRNGKEDYPTHEEFWA 59 Query: 49 LRDVSFEVGRGEIVGILGRNGSGKSTLLQIICGVMQASSGRVRVKGRISALLELGAGFNP 108 L+DVSFE+ +G+ VGI+GRNG+GKSTLL+I+ + + + GR+ +KGR+++LLE+G GF+P Sbjct: 60 LKDVSFEIKQGDRVGIIGRNGAGKSTLLKILSRITEPTEGRISIKGRVASLLEVGTGFHP 119 Query: 109 EFTGRENVILNGAIHGFSRKQMLERMDEIEAFADIGEFFDQPIKLYSSGMFVRVAFAAAI 168 E TGREN+ LNGAI G + ++ ++ DEI AFA++ +F D P+K YSSGM+VR+AFA A Sbjct: 120 ELTGRENIYLNGAILGMGKAEIKKKFDEIVAFAEVEKFLDTPVKRYSSGMYVRLAFAVAA 179 Query: 169 HVEPEILVVDEALSVGDSKFQHRCFQRIRSFMEA-GKTILVVSHSTDTLLRICDRGVVMD 227 H+EPEIL+VDE L+VGD++FQ RC ++ E G+T++ VSH+ + +C+ ++ Sbjct: 180 HLEPEILIVDEVLAVGDAQFQKRCLGKMEDVAEKEGRTVIFVSHAMPMIASLCNSCFLLK 239 Query: 228 KGEMVLVGDIASAVNRYH 245 GE++ G S + Y Sbjct: 240 HGEVIKEGSPGSVIAYYQ 257 >CAC2328 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component Cac Clostridium acetobutylicum Length = 419 Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/244 (45%), Positives = 164/244 (67%), Gaps = 4/244 (1%) Query: 11 VIAVKNVSKKFRLFS----TAKERLAEALHPLRKQYHKEFWALRDVSFEVGRGEIVGILG 66 VI KNVSK F L+ + KE+ + K ++ L++ SF++G+GE +GI+G Sbjct: 3 VIEFKNVSKHFNLYKNKSYSLKEKFLNKVLNRNKLEVEQLHVLKNASFKIGQGETIGIIG 62 Query: 67 RNGSGKSTLLQIICGVMQASSGRVRVKGRISALLELGAGFNPEFTGRENVILNGAIHGFS 126 NG+GKST L+++ +++ + G+V VKG+IS+LLE+G GF P+ TGRENV L G+I G S Sbjct: 63 ENGTGKSTSLKLVANIIRPNEGQVTVKGKISSLLEVGVGFQPDMTGRENVYLYGSIMGLS 122 Query: 127 RKQMLERMDEIEAFADIGEFFDQPIKLYSSGMFVRVAFAAAIHVEPEILVVDEALSVGDS 186 +K++ ER DEI FA++ F D P+K YSSGM++R+ F+ A+ V P+IL+VDE L+VGD+ Sbjct: 123 KKEIDERYDEIVEFAELENFMDTPVKNYSSGMYMRLGFSVAVTVNPDILLVDEVLAVGDA 182 Query: 187 KFQHRCFQRIRSFMEAGKTILVVSHSTDTLLRICDRGVVMDKGEMVLVGDIASAVNRYHQ 246 FQ +C +I++F E GKTIL VSH T+ RICDR + + KG V+ G V Y + Sbjct: 183 NFQKKCLNKIQAFKEQGKTILFVSHDMSTVRRICDRCIFIRKGGEVIEGSTDRMVGLYMK 242 Query: 247 ILFG 250 +L+ Sbjct: 243 LLYA 246