BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0381.p         (57 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2822 [J] COG0261 Ribosomal protein L21 Rso Ralstonia solanace...    93   1e-19
NMB0325 [J] COG0261 Ribosomal protein L21 Nme Neisseria meningit...    86   1e-17
NMA2162 [J] COG0261 Ribosomal protein L21 NmA Neisseria meningit...    86   1e-17
PA4568 [J] COG0261 Ribosomal protein L21 Pae Pseudomonas aeruginosa    77   7e-15
HI0880 [J] COG0261 Ribosomal protein L21 Hin Haemophilus influenzae    76   2e-14

>RSc2822 [J] COG0261 Ribosomal protein L21 Rso Ralstonia solanacearum
          Length = 103

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           +K GAPLV+GA V ATV++ GRHDKV+IFKMRRRKHYQK QGHRQNYTEL+I SI A
Sbjct: 47  LKVGAPLVSGAAVKATVISHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELRIDSIVA 103


>NMB0325 [J] COG0261 Ribosomal protein L21 Nme Neisseria meningitidis MC58
          Length = 102

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 47/55 (85%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSI 55
           VK GAP + GA V A VVA GR +KVRIFKMRRRKHYQKRQGHRQN+T+++IV+I
Sbjct: 47  VKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAI 101


>NMA2162 [J] COG0261 Ribosomal protein L21 NmA Neisseria meningitidis Z2491
          Length = 102

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 47/55 (85%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSI 55
           VK GAP + GA V A VVA GR +KVRIFKMRRRKHYQKRQGHRQN+T+++IV+I
Sbjct: 47  VKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAI 101


>PA4568 [J] COG0261 Ribosomal protein L21 Pae Pseudomonas aeruginosa
          Length = 103

 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 43/57 (75%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           VK G P+V GA V A VV+ GRHDKVRI K RRRKH+ KRQGHRQ +TE++I  I A
Sbjct: 47  VKIGLPVVEGAKVTAEVVSHGRHDKVRIIKFRRRKHHMKRQGHRQWFTEIKITGIQA 103


>HI0880 [J] COG0261 Ribosomal protein L21 Hin Haemophilus influenzae
          Length = 103

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 46/57 (80%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           VK GAP+VAGA V+A VVAQGR +KV+I K RRRKH +K+QGHRQ +TE++I  I A
Sbjct: 47  VKIGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKITGIQA 103