BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0370.p (273 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO2287 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 332 6e-91 MK0602 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 192 5e-49 AGpT116 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 169 6e-42 PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 164 3e-40 AGl1398 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 160 3e-39 >YPO2287 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 273 Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 171/266 (64%), Positives = 216/266 (81%) Query: 8 SFLEGLLVPIIVIALWEGASRAGWINPQILPSPWAVLRKWVEYATPLKPYDPEAGSWLAW 67 +++ +++P IV+ +W+ + +GWI P ILPSP AV+ +W +Y P + Y+PE +WL W Sbjct: 8 QYIKWVIMPTIVLLMWQMLAISGWIQPTILPSPVAVVVRWFDYFLPYEAYNPETSNWLMW 67 Query: 68 AFSGELVMDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPPIAY 127 + SGEL+ DA S+YRV+ GFLIGA LALPLGL +GSS+ LMN +Q +RPIPPIAY Sbjct: 68 SLSGELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAY 127 Query: 128 IPLAILWFGLGNPPALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQSTLFLRV 187 IPLA+LWFGLGNPPA FLIS+GAFFP+L+NTIAGVR VD IY+ AARNLGA Q+T+F R+ Sbjct: 128 IPLAMLWFGLGNPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQATMFRRI 187 Query: 188 MLPAAVPYILSGVRIGIGTAFIVVIVAEMIAVSNGLGFRIMEAREYFWSDKIIAGMITIG 247 +LPAA PYIL+G+R+GIGTAFI VIVAEMIAV++G+G+RI+EAREY WSDK+IAGM TIG Sbjct: 188 ILPAATPYILTGMRVGIGTAFICVIVAEMIAVNSGVGYRILEAREYMWSDKVIAGMFTIG 247 Query: 248 LLGLAIDLGMSRLNNYMLRWHRGLEN 273 LGL IDL M RLN +LRWHRG+ N Sbjct: 248 FLGLVIDLCMDRLNRRLLRWHRGIGN 273 >MK0602 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mka Methanopyrus kandleri AV19 Length = 251 Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 119/268 (44%), Positives = 170/268 (63%), Gaps = 22/268 (8%) Query: 4 KNKGSFLEGLL---VPIIVIALWEGASRAGWINPQILPSPWAVLRKWVEYATPLKPYDPE 60 +N LE LL P+ V+A+W+ S G INP +LP P V +VE Sbjct: 3 RNGDERLETLLKVSAPVAVLAIWQAVSGLGLINPVLLPPPSQVFSVFVE----------- 51 Query: 61 AGSWLAWAFSGELVMDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIR 120 GE++ A+ SLYRV G+ I A + LG+LMG+ + + M+L +++IR Sbjct: 52 --------MPGEILKHALTSLYRVAVGYSIAAVAGVSLGVLMGTYRTAHAAMDLLIEIIR 103 Query: 121 PIPPIAYIPLAILWFGLGNPPALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQ 180 PIPPIA+IPLAI+WFG+G+P A F+I +G+FFP+L+NTI+G+R VD IY+ AA NLGA Sbjct: 104 PIPPIAWIPLAIVWFGIGDPSAFFIIFVGSFFPILINTISGIRSVDRIYVEAALNLGADD 163 Query: 181 STLFLRVMLPAAVPYILSGVRIGIGTAFIVVIVAEMIAVSNGLGFRIMEAREYFWSDKII 240 + L V++P A+P I +G+R+G+G ++ V+ AEMIA +GLG+ I+EA+ +D++I Sbjct: 164 TALIRHVLVPGALPNIFTGLRVGLGVGWMCVVAAEMIAAKSGLGYMIIEAQRILATDQVI 223 Query: 241 AGMITIGLLGLAIDLGMSRLNNYMLRWH 268 AGMITIGLLGL +D G L L W Sbjct: 224 AGMITIGLLGLVMDRGFRYLERRALVWR 251 >AGpT116 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 313 Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 99/257 (38%), Positives = 149/257 (57%), Gaps = 19/257 (7%) Query: 17 IIVIALWEGASRAGWINPQILPSPWAVLRK-WVEYATPLKPYDPEAGSWLAWAFSGELVM 75 + ++ +W+ A G + P +LP+P ++R W SGEL Sbjct: 73 VALVTVWQVACDFGAVRPVLLPAPSTIVRTIW------------------NMTLSGELAE 114 Query: 76 DAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPPIAYIPLAILWF 135 S RV+ GF I A LAL LG++MG + L +L VQV++PIPPIA+IPL+ILWF Sbjct: 115 HVAVSSARVLQGFGIAAVLALALGIVMGLIGPLNRLADLMVQVLKPIPPIAWIPLSILWF 174 Query: 136 GLGNPPALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQSTLFLRVMLPAAVPY 195 G+G +F+I LGAFFP+L++T+ V Q D Y+ AR L + +VM+P A+P Sbjct: 175 GIGEEAKIFIIVLGAFFPILVSTLDAVHQTDVRYVELARVLEVPRLNFIRQVMIPGALPQ 234 Query: 196 ILSGVRIGIGTAFIVVIVAEMIAVSNGLGFRIMEAREYFWSDKIIAGMITIGLLGLAIDL 255 I+SG+R+GI +++ V+ AE+IA S+G+GF IM+ R + ++AGMIT+G+LG D Sbjct: 235 IMSGLRLGITMSWMCVVAAELIAASSGIGFLIMDGRVMSNASVVLAGMITLGVLGKLTDD 294 Query: 256 GMSRLNNYMLRWHRGLE 272 + ++RW G Sbjct: 295 ALRFAERRLVRWRAGFS 311 >PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 262 Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 98/256 (38%), Positives = 147/256 (57%), Gaps = 21/256 (8%) Query: 15 VPIIVIALWEGASRAGWINPQILPSPWAVLRKWVEYATPLKPYDPEAGSWLAWAF--SGE 72 +P++++A+W+ A GW++ +ILP+P AVL EAG WA SGE Sbjct: 16 LPLVLLAVWQAAVEFGWLSSRILPAPSAVL---------------EAG----WALLRSGE 56 Query: 73 LVMDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPPIAYIPLAI 132 + S +R GFLIG + L LG + G S+ ++ +VQ+IR +P +A IPL I Sbjct: 57 IWQHLAISGWRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVI 116 Query: 133 LWFGLGNPPALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQSTLFLRVMLPAA 192 LWFG+ +FL++LG FP+ +NT G+R +D L AR+ G S LF +V+LP A Sbjct: 117 LWFGIDESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGA 176 Query: 193 VPYILSGVRIGIGTAFIVVIVAEMIAVSNGLGFRIMEAREYFWSDKIIAGMITIGLLGLA 252 +P IL GVR +G ++ +IVAE I+ S+G+G+ M ARE+ +D ++ ++ +LG Sbjct: 177 LPSILVGVRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKL 236 Query: 253 IDLGMSRLNNYMLRWH 268 DL L LRWH Sbjct: 237 ADLAARGLERVWLRWH 252 >AGl1398 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 260 Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 146/267 (54%), Gaps = 17/267 (6%) Query: 7 GSFLEGLLVPIIVIALWEGASRAGWINPQILPSPWAVLRKWVEYATPLKPYDPEAGSWLA 66 G G L+P +++A WE A+R G I+ +LP+P AV A ++ Sbjct: 10 GGVATGWLLPALILAGWEVAARVGLISANVLPAPSAV-----------------AEAFWR 52 Query: 67 WAFSGELVMDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPPIA 126 SGEL+ + S R +AGF IG + GL G S+ + T+Q+IR IP +A Sbjct: 53 LLLSGELIANIGVSSARALAGFAIGGSIGFIFGLANGLSRFSRSFTDTTLQMIRNIPHLA 112 Query: 127 YIPLAILWFGLGNPPALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQSTLFLR 186 IPL ILWFG+ LFL++LG FFP+ +NT+ G++ VD + R G S TLF R Sbjct: 113 LIPLVILWFGIDEEAKLFLVALGVFFPIYINTLLGIQGVDPQLVEMGRTYGMSPFTLFRR 172 Query: 187 VMLPAAVPYILSGVRIGIGTAFIVVIVAEMIAVSNGLGFRIMEAREYFWSDKIIAGMITI 246 V+LP A+P I +G+R +G ++ +IVAE I+ S+GLG+ M+ARE+ D ++ ++ Sbjct: 173 VILPGALPSIFTGLRYALGIMWLTLIVAETISSSSGLGYMAMQAREFLLIDVVVLSILIY 232 Query: 247 GLLGLAIDLGMSRLNNYMLRWHRGLEN 273 LLG D L + L+WH + Sbjct: 233 ALLGKLADSFARFLESIFLQWHPAFKK 259