BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0334.p (392 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0496 [J] COG0162 Tyrosyl-tRNA synthetase Rso Ralstonia solana... 647 0.0 PM0755 [J] COG0162 Tyrosyl-tRNA synthetase Pmu Pasteurella multo... 501 e-142 HI1610 [J] COG0162 Tyrosyl-tRNA synthetase Hin Haemophilus influ... 488 e-138 PA0668 [J] COG0162 Tyrosyl-tRNA synthetase Pae Pseudomonas aerug... 479 e-135 VC0631 [J] COG0162 Tyrosyl-tRNA synthetase Vch Vibrio cholerae 473 e-133 >RSc0496 [J] COG0162 Tyrosyl-tRNA synthetase Rso Ralstonia solanacearum Length = 392 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/392 (78%), Positives = 347/392 (88%) Query: 1 LAITKRGIDELLIESEFAQKLARAEQSGQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQN 60 + +T+RG DELLI +E+ QKLAR+ +G PLRIKLGLDPTAPD+H+GHTVVLNKMRQLQ+ Sbjct: 1 MEVTQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQD 60 Query: 61 LGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASLVLDPSKTEIRYNS 120 LGHQVIFLIGDFTS IGDPSGRNATRPPL+REQIE NA+TY+ QAS+VLDPSKTEIRYNS Sbjct: 61 LGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTEIRYNS 120 Query: 121 EWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQGYDSVALKSD 180 EWCD LG+RG+IQLA++YTVARMMERDDFTKR+K G PISVHEFLYPLMQGYDSVALKSD Sbjct: 121 EWCDPLGARGIIQLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVALKSD 180 Query: 181 LELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKSKGNYIGITEPANT 240 LELGGTDQKFNLLVGRELQK++GQEPQCILTMPLL GLDGVEKMSKSKGNY+GI+E N Sbjct: 181 LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYVGISEAPNE 240 Query: 241 MFAKVMSISDVMMWRYYDLLSFRSMAEIAGYKAEVDAGKNPRDIKVALGQEIVARFHSQQ 300 MF K+MSISD +MW YY LLSFR +AEI K EV G+NPRD KV L QEI+ARFHSQ Sbjct: 241 MFGKLMSISDDLMWTYYTLLSFRPLAEIDLMKQEVTLGRNPRDCKVLLAQEIIARFHSQA 300 Query: 301 AAEDALADFVNRSKGGIPDDIPEVSLSGAPLGIGQLLKQANLCASTSEALRMVEQGGVRI 360 AE AL DF +R++GG+PDDIP++ LSGAP+GI QLLKQA LC STSEA R +EQGGV+I Sbjct: 301 DAERALEDFNHRARGGVPDDIPQIELSGAPIGIAQLLKQAGLCPSTSEANRNIEQGGVKI 360 Query: 361 DGTVISDKGLKVEAGQCVVQVGRRKFARVTLA 392 DGTVISDKGLKVEAG V+QVG+R+FARV L+ Sbjct: 361 DGTVISDKGLKVEAGTFVMQVGKRRFARVVLS 392 >PM0755 [J] COG0162 Tyrosyl-tRNA synthetase Pmu Pasteurella multocida Length = 395 Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust. Identities = 243/392 (61%), Positives = 301/392 (76%), Gaps = 6/392 (1%) Query: 1 LAITKRGIDELLIESEFAQKLARAEQSGQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQN 60 LA KRG+DE+L E++ +KL + +PLR+KLG DPTAPD+HLGHTVVLNK+RQ Q Sbjct: 8 LAELKRGVDEILSEADLIEKL----KENRPLRVKLGADPTAPDIHLGHTVVLNKLRQFQQ 63 Query: 61 LGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASLVLDPSKTEIRYNS 120 GH+VIFLIGDFT M+GDPSG+N TRPPLSR+ + NA+TY Q +LDP KT I +NS Sbjct: 64 FGHEVIFLIGDFTGMVGDPSGKNTTRPPLSRDDVLRNAETYKQQIYKILDPQKTRIVFNS 123 Query: 121 EWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQGYDSVALKSD 180 W LG+ GMI+L S YTVARM+ERDDF KRF PI++HEF+YPL+QGYDSVAL +D Sbjct: 124 SWLGELGTEGMIRLTSNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQGYDSVALDAD 183 Query: 181 LELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKSKGNYIGITEPANT 240 +ELGGTDQKFNLLVGRELQK GQ+PQ +T+PLL GLDG +KMSKS GNYIG+ E Sbjct: 184 IELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVAESPTE 243 Query: 241 MFAKVMSISDVMMWRYYDLLSFRSMAEIAGYKAEVDAGKNPRDIKVALGQEIVARFHSQQ 300 MF KVMSISD +MW +YDLLSFR + EIA K EV+ G+NPRDIKV L +E++ARFHS+ Sbjct: 244 MFGKVMSISDELMWDWYDLLSFRPLTEIAQLKQEVENGRNPRDIKVLLAKELIARFHSEA 303 Query: 301 AAEDALADFVNR-SKGGIPDDIPEVSLSGAPLGIGQLLKQANLCASTSEALRMVEQGGVR 359 AE A +F+NR KG +P+D+PE++ G +G+ LLK+A L ASTSEA RMV+QGGV+ Sbjct: 304 DAEAAEQEFINRFQKGAMPEDMPELTFEGE-MGLANLLKEAGLVASTSEANRMVQQGGVK 362 Query: 360 IDGTVISDKGLKVEAGQCVVQVGRRKFARVTL 391 IDG + D L ++A V QVG+RKFARVT+ Sbjct: 363 IDGEKVEDAKLVIKASTAVYQVGKRKFARVTV 394 >HI1610 [J] COG0162 Tyrosyl-tRNA synthetase Hin Haemophilus influenzae Length = 401 Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust. Identities = 238/392 (60%), Positives = 302/392 (77%), Gaps = 6/392 (1%) Query: 1 LAITKRGIDELLIESEFAQKLARAEQSGQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQN 60 LA KRG DE+L E++ +KL + +PL++KLG DPTAPD+HLGHTVVLNK+RQ Q Sbjct: 8 LAELKRGTDEILSEADLIEKL----KENRPLKVKLGADPTAPDIHLGHTVVLNKLRQFQQ 63 Query: 61 LGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASLVLDPSKTEIRYNS 120 LGH+V FLIGDFT M+GDPSG+NATRPPLSRE + NA+TY Q +LDP KT+I +NS Sbjct: 64 LGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTKIVFNS 123 Query: 121 EWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQGYDSVALKSD 180 EW LG+ GMI+LAS YTVARM+ERDDF KRF PI++HEF+YPL+QGYDSVAL +D Sbjct: 124 EWLSKLGTXGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVALDAD 183 Query: 181 LELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKSKGNYIGITEPANT 240 +ELGGTDQKFNLLVGRELQK G++PQ +T+PLL GLDG +KMSKS GNYIG+TE + Sbjct: 184 VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTEAPSD 243 Query: 241 MFAKVMSISDVMMWRYYDLLSFRSMAEIAGYKAEVDAGKNPRDIKVALGQEIVARFHSQQ 300 MF KVMSISD +MW +Y+LLSFR + EIA K+EV+ GKNPRD+K+ L +E++ARFH+++ Sbjct: 244 MFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRDVKILLAKELIARFHNEE 303 Query: 301 AAEDALADFVNR-SKGGIPDDIPEVSLSGAPLGIGQLLKQANLCASTSEALRMVEQGGVR 359 AA A +F+NR KG +PD++PE + SG +G+ LLK+A L STSEA+R +QGGV+ Sbjct: 304 AANAAEQEFINRFQKGAMPDEMPEFTFSGE-MGLATLLKEAGLVPSTSEAIRSAQQGGVK 362 Query: 360 IDGTVISDKGLKVEAGQCVVQVGRRKFARVTL 391 I+G + + G V QVG+RKFARV L Sbjct: 363 INGEKVDNVKDNAPKGTNVYQVGKRKFARVRL 394 >PA0668 [J] COG0162 Tyrosyl-tRNA synthetase Pae Pseudomonas aeruginosa Length = 399 Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust. Identities = 230/394 (58%), Positives = 300/394 (76%), Gaps = 8/394 (2%) Query: 1 LAITKRGIDELLIESEFAQKLARAEQSGQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQN 60 LA+ +RG DE+L+E+E KL R GQPLRIK G DPTAPDLHLGHTV++NK+RQ Q+ Sbjct: 8 LALIQRGADEILVEAELVAKLKR----GQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQD 63 Query: 61 LGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASLVLDPSKTEIRYNS 120 LGHQVIFLIGDFT MIGDPSG++ TRPPL+REQ+ NA+TY +Q +LDP+KTE+ +NS Sbjct: 64 LGHQVIFLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPAKTEVAFNS 123 Query: 121 EWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQGYDSVALKSD 180 W D L I+LAS+YTVARM+ERDDF+KR+ PI++HEFLYPL+QGYDSVALK+D Sbjct: 124 TWMDQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKAD 183 Query: 181 LELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKSKGNYIGITEPANT 240 +ELGGTDQKFNLL+GRELQ+ +GQE Q ILTMPLLEGLDGV+KMSKS GNYIGI E Sbjct: 184 VELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQEAPGV 243 Query: 241 MFAKVMSISDVMMWRYYDLLSFRSMAEIAGYKAEVDAGKNPRDIKVALGQEIVARFHSQQ 300 M++K++SI D +MWRY++LLSFRS+ EI ++ +V+AG NPRDIK+ L +EIVARFH ++ Sbjct: 244 MYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVARFHGEE 303 Query: 301 AAEDALADFVNRSK-GGIPDDIPEVSLSGAP-LGIGQLLKQANLCASTSEALRMVEQGGV 358 AA A NR K G +P+D+PE+ LS + + +L +A L + + A ++ G V Sbjct: 304 AAASAHKSAGNRLKEGELPEDLPEIELSSPEDMPVASVLNKAGLVKNAAAARDLLGAGSV 363 Query: 359 RIDGTVISDKGLKVEAGQC-VVQVGRRKFARVTL 391 ++DG V+ D+ + G+ V Q G++ FAR+TL Sbjct: 364 KVDGQVV-DRTFMLALGETRVFQAGKKAFARITL 396 >VC0631 [J] COG0162 Tyrosyl-tRNA synthetase Vch Vibrio cholerae Length = 395 Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust. Identities = 230/391 (58%), Positives = 294/391 (75%), Gaps = 4/391 (1%) Query: 1 LAITKRGIDELLIESEFAQKLARAEQSGQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQN 60 LA KRG++EL+ E E KL + +PLRIKLG DPTAPD+HLGHTV+LNK+R Q+ Sbjct: 8 LAEIKRGVEELIPEEELIAKL----KENRPLRIKLGADPTAPDIHLGHTVILNKLRTFQD 63 Query: 61 LGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASLVLDPSKTEIRYNS 120 LGH V FLIGDFT M+GDP+G+N TRPPL+RE + NA+TY Q +LDP+KT+I++NS Sbjct: 64 LGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTKIQFNS 123 Query: 121 EWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQGYDSVALKSD 180 EW LG+ GMI+LAS TVARM+ERDDF KR+ G PI++HEF+YPL+QGYDSVA+++D Sbjct: 124 EWLSKLGAEGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQGYDSVAMETD 183 Query: 181 LELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKSKGNYIGITEPANT 240 +ELGGTDQKFNLL+GRELQK GQ+PQ +L MPLL GLDG +KMSKS NYIG++E + Sbjct: 184 VELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSKSAHNYIGVSEAPSE 243 Query: 241 MFAKVMSISDVMMWRYYDLLSFRSMAEIAGYKAEVDAGKNPRDIKVALGQEIVARFHSQQ 300 MF K+MSISD +MW YY+LLSFR + E+A +KAEV G NPRDIK+ L +EI+ARFHSQ Sbjct: 244 MFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRDIKILLAKEIIARFHSQA 303 Query: 301 AAEDALADFVNRSKGGIPDDIPEVSLSGAPLGIGQLLKQANLCASTSEALRMVEQGGVRI 360 A+ A +F+NR + G + + + I LLK+A L ASTS+ALRM++QG V++ Sbjct: 304 DADAAEQEFINRFQKGAMPEEMPEFEFESGIAISNLLKEAGLVASTSDALRMIKQGAVKL 363 Query: 361 DGTVISDKGLKVEAGQCVVQVGRRKFARVTL 391 DG + D L G V QVG+RKFARVT+ Sbjct: 364 DGEKLEDAKLIPACGTSVYQVGKRKFARVTI 394