BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0333.p         (157 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0497 Non COG                                                       199   2e-51
HI0670 [J] COG1490 D-Tyr-tRNAtyr deacylase Hin Haemophilus influ...   164   7e-41
PA5079 [J] COG1490 D-Tyr-tRNAtyr deacylase Pae Pseudomonas aerug...   164   8e-41
dtd [J] COG1490 D-Tyr-tRNAtyr deacylase Eco Escherichia coli K12      157   8e-39
ZyihZ [J] COG1490 D-Tyr-tRNAtyr deacylase EcZ Escherichia coli O...   157   8e-39

>RSc0497 Non COG
          Length = 166

 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/156 (64%), Positives = 119/156 (76%), Gaps = 7/156 (4%)

Query: 1   MIALLQRVSQASVVVDGQTLGAIDTGLMVLVCAERNDSTAEADALLKKLLAYRVFADEAG 60
           MI L+QRVSQA+V VDG+ +G I  GL+ LVCAER D+ AEAD LL+KLL YRVF+D  G
Sbjct: 1   MIGLIQRVSQAAVRVDGRVVGEIGPGLLALVCAERGDTVAEADRLLEKLLNYRVFSDAQG 60

Query: 61  KMNRSVADVQ-----GGLLLIPQFTLAADTNSGTRPSFTPAATPELGRQLFDHFVAQARS 115
           KMN  V ++      GGLL++ QFTLAADT SGTRPSFTPAA PE GR+L++HFVA+AR 
Sbjct: 61  KMNLPVRNIDGNGLAGGLLVVSQFTLAADTKSGTRPSFTPAAAPEAGRRLYEHFVARARQ 120

Query: 116 GHGKDKVGTGRFGADMKVSLTNDGPVTFWLQVKPKA 151
            H    V TG FGA M+VSL NDGPVTFWLQV P+A
Sbjct: 121 QH--PIVATGEFGAMMQVSLVNDGPVTFWLQVAPQA 154


>HI0670 [J] COG1490 D-Tyr-tRNAtyr deacylase Hin Haemophilus influenzae
          Length = 144

 Score =  164 bits (415), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 80/147 (54%), Positives = 105/147 (71%), Gaps = 3/147 (2%)

Query: 1   MIALLQRVSQASVVVDGQTLGAIDTGLMVLVCAERNDSTAEADALLKKLLAYRVFADEAG 60
           MIAL+QRVSQA V V G+T+G I  GL+VL+  E+ D+  +AD L +K+L YR+F+DE  
Sbjct: 1   MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEND 60

Query: 61  KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAATPELGRQLFDHFVAQARSGHGKD 120
           KMN +V   QG LL++ QFTLAADT  G RPSF+  A+P L  +L+++F+ +      K 
Sbjct: 61  KMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAE---KL 117

Query: 121 KVGTGRFGADMKVSLTNDGPVTFWLQV 147
            V TG+F ADM+VSLTNDGPVTFWL V
Sbjct: 118 PVSTGQFAADMQVSLTNDGPVTFWLNV 144


>PA5079 [J] COG1490 D-Tyr-tRNAtyr deacylase Pae Pseudomonas aeruginosa
          Length = 145

 Score =  164 bits (414), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 102/146 (69%), Gaps = 2/146 (1%)

Query: 1   MIALLQRVSQASVVVDGQTLGAIDTGLMVLVCAERNDSTAEADALLKKLLAYRVFADEAG 60
           M ALLQRV  A V V G+ +G+ID GL+VLV  E  D    A  +L KLL YRVF D+ G
Sbjct: 1   MKALLQRVGAARVEVGGEIVGSIDRGLLVLVGVEPEDGERCAAKMLHKLLNYRVFGDDEG 60

Query: 61  KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAATPELGRQLFDHFVAQARSGHGKD 120
           KMNRS+ DVQGGLLL+ QFTLAA+T SG RPSF+ AA P  G  +F+H V  AR  +   
Sbjct: 61  KMNRSLLDVQGGLLLVSQFTLAANTRSGLRPSFSSAAPPAQGEAVFEHLVKLAREAY--P 118

Query: 121 KVGTGRFGADMKVSLTNDGPVTFWLQ 146
           +V TGRFGADM+V L NDGPVTF L+
Sbjct: 119 QVATGRFGADMQVHLVNDGPVTFLLE 144


>dtd [J] COG1490 D-Tyr-tRNAtyr deacylase Eco Escherichia coli K12
          Length = 145

 Score =  157 bits (397), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 75/147 (51%), Positives = 103/147 (70%), Gaps = 2/147 (1%)

Query: 1   MIALLQRVSQASVVVDGQTLGAIDTGLMVLVCAERNDSTAEADALLKKLLAYRVFADEAG 60
           MIAL+QRV++ASV V+G+  G I  GL+VL+  E++D   +A+ L +++L YR+F+D  G
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 61  KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAATPELGRQLFDHFVAQARSGHGKD 120
           KMN +V    G +L++ QFTLAADT  G RPSF+  A+P+    L+D+FV + R      
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT 120

Query: 121 KVGTGRFGADMKVSLTNDGPVTFWLQV 147
           +  TGRF ADM+VSL NDGPVTFWLQV
Sbjct: 121 Q--TGRFAADMQVSLVNDGPVTFWLQV 145


>ZyihZ [J] COG1490 D-Tyr-tRNAtyr deacylase EcZ Escherichia coli O157:H7
           EDL933
          Length = 145

 Score =  157 bits (397), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 75/147 (51%), Positives = 103/147 (70%), Gaps = 2/147 (1%)

Query: 1   MIALLQRVSQASVVVDGQTLGAIDTGLMVLVCAERNDSTAEADALLKKLLAYRVFADEAG 60
           MIAL+QRV++ASV V+G+  G I  GL+VL+  E++D   +A+ L +++L YR+F+D  G
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 61  KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAATPELGRQLFDHFVAQARSGHGKD 120
           KMN +V    G +L++ QFTLAADT  G RPSF+  A+P+    L+D+FV + R      
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT 120

Query: 121 KVGTGRFGADMKVSLTNDGPVTFWLQV 147
           +  TGRF ADM+VSL NDGPVTFWLQV
Sbjct: 121 Q--TGRFAADMQVSLVNDGPVTFWLQV 145