BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0289.p (283 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2140 [G] COG3839 ABC-type sugar transport systems, ATPase com... 353 2e-97 VCA0946 [G] COG3839 ABC-type sugar transport systems, ATPase com... 312 4e-85 YPO3712 [G] COG3839 ABC-type sugar transport systems, ATPase com... 291 2e-78 SMc04140 [G] COG3839 ABC-type sugar transport systems, ATPase co... 290 2e-78 malK [G] COG3839 ABC-type sugar transport systems, ATPase compon... 285 7e-77 >RSc2140 [G] COG3839 ABC-type sugar transport systems, ATPase components Rso Ralstonia solanacearum Length = 369 Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 175/275 (63%), Positives = 206/275 (74%) Query: 1 MSLYDNMAFGLKIAGKSKAEIDAAVQHAAKILHIDHLLDRKPRALSGGQRQRVAIGRAIT 60 M+LYDNMAFGLK+AG KAEID AV+ AAKILHIDHLLDRKP+ LSGGQRQRVAIGRAIT Sbjct: 90 MTLYDNMAFGLKLAGAKKAEIDQAVKGAAKILHIDHLLDRKPKQLSGGQRQRVAIGRAIT 149 Query: 61 RQPSVFLFDEPLSNLDAALRVKMRLEFAKLHDDLKTTMIYVTHDQIEAMTLADKIVVLSE 120 R+P VFLFDEPLSNLDAALRVKMRLEFA+LH +LKTTMIYVTHDQ+EAMTLADKIVVLS Sbjct: 150 RKPKVFLFDEPLSNLDAALRVKMRLEFARLHGELKTTMIYVTHDQVEAMTLADKIVVLSG 209 Query: 121 GRIEQVGSPQQLYHHPANRFVAGFIGSPKMNFIDGTVAAIQADGVQVQLPGGGLQWAAVE 180 G ++QVG+P +YH PAN+FVA FIGSPKMNF+ GTV + ADGV V+ G Q ++ Sbjct: 210 GSVQQVGTPNTVYHAPANQFVASFIGSPKMNFLQGTVESAAADGVLVRYASGETQQVRID 269 Query: 181 GSALQVGQKVSLGVRPEHLNIAQGQAALQARCTALELLGDFSYLYAAYEGSEDALILRVP 240 G L G V++G+RPEHL + + + A+E LGD +YLYA + D LI R+P Sbjct: 270 GQGLARGASVTVGIRPEHLQVGMSAEGVSVKTMAVESLGDAAYLYAESPVAPDGLIARIP 329 Query: 241 DSLNPPHGSVLPLAADPARCHLFGADGQALPRLAS 275 G L + ADPA CHLF A G A RL++ Sbjct: 330 PLDTYRAGETLHVHADPAHCHLFDAQGNAFARLSA 364 >VCA0946 [G] COG3839 ABC-type sugar transport systems, ATPase components Vch Vibrio cholerae Length = 373 Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 152/283 (53%), Positives = 197/283 (69%), Gaps = 1/283 (0%) Query: 1 MSLYDNMAFGLKIAGKSKAEIDAAVQHAAKILHIDHLLDRKPRALSGGQRQRVAIGRAIT 60 ++LYDNM+FGLK++ K+EI V HAA+IL + HLLDR+P+ALSGGQRQRVAIGR + Sbjct: 90 LNLYDNMSFGLKLSKADKSEIKKRVDHAAEILQLSHLLDRQPKALSGGQRQRVAIGRTLV 149 Query: 61 RQPSVFLFDEPLSNLDAALRVKMRLEFAKLHDDLKTTMIYVTHDQIEAMTLADKIVVLSE 120 QP+VFL DEPLSNLDAALRV+MR E KL L TMIYVTHDQ+EAMT+ADKIVVL Sbjct: 150 SQPNVFLLDEPLSNLDAALRVQMRSEITKLQRKLGCTMIYVTHDQVEAMTMADKIVVLDA 209 Query: 121 GRIEQVGSPQQLYHHPANRFVAGFIGSPKMNFIDGTVAAIQADGVQVQLPGGGLQWAAVE 180 G + QVG P +LYH+P NRFVAGFIGSPKMNF+ + ++ D VQVQL G W V+ Sbjct: 210 GFVSQVGKPLELYHYPQNRFVAGFIGSPKMNFMSVFIEGVEKDRVQVQLSNGTTFWIPVD 269 Query: 181 GSALQVGQKVSLGVRPEHLNIAQ-GQAALQARCTALELLGDFSYLYAAYEGSEDALILRV 239 G+ + G+++SLG+RPEHL A+ G A ++ + +E LG+ + +Y +GS+ +I R Sbjct: 270 GTTVTRGERMSLGIRPEHLVEAEHGDAKIEGKVMIVEKLGNETQVYMNLKGSDSDVIYRQ 329 Query: 240 PDSLNPPHGSVLPLAADPARCHLFGADGQALPRLASSVAAQRP 282 PD+L+ G L + RCHLF +DG+A RL P Sbjct: 330 PDTLDVETGDTLTIGIPAHRCHLFHSDGRACRRLHKEKGVDLP 372 >YPO3712 [G] COG3839 ABC-type sugar transport systems, ATPase components Ype Yersinia pestis Length = 369 Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 146/274 (53%), Positives = 185/274 (67%), Gaps = 1/274 (0%) Query: 1 MSLYDNMAFGLKIAGKSKAEIDAAVQHAAKILHIDHLLDRKPRALSGGQRQRVAIGRAIT 60 +S+ +NM+FGLK+AG KAEI V A++L + HLLDR+P+ALSGGQRQRVAIGR + Sbjct: 90 LSVAENMSFGLKLAGVKKAEIYQRVNQVAEVLQLAHLLDRRPKALSGGQRQRVAIGRTLV 149 Query: 61 RQPSVFLFDEPLSNLDAALRVKMRLEFAKLHDDLKTTMIYVTHDQIEAMTLADKIVVLSE 120 +P VFL DEPLSNLDAALRV+MR+E ++LH L+ TMIYVTHDQ+EAMTLADKIVVL Sbjct: 150 SEPDVFLLDEPLSNLDAALRVQMRIEISRLHKRLERTMIYVTHDQVEAMTLADKIVVLDA 209 Query: 121 GRIEQVGSPQQLYHHPANRFVAGFIGSPKMNFIDGTVAAIQADGVQVQLPGGGLQWAAVE 180 G I QVG P +LYH+PANRFVAGFIGSPKMNF+ V A + VQ++LP W VE Sbjct: 210 GNIAQVGKPLELYHYPANRFVAGFIGSPKMNFLPVKVTAAEPRQVQIELPNHQRVWLPVE 269 Query: 181 GSALQVGQKVSLGVRPEH-LNIAQGQAALQARCTALELLGDFSYLYAAYEGSEDALILRV 239 G +QVG +SLG+RPEH L + + L+ +E LG+ + ++ L+ R Sbjct: 270 GDQVQVGANMSLGIRPEHLLPSSASEVTLEGEIQVVEQLGNETQIHIQIPAIRQNLVYRQ 329 Query: 240 PDSLNPPHGSVLPLAADPARCHLFGADGQALPRL 273 D + G+ + P RCHLF DG A RL Sbjct: 330 NDVVLVEEGATFSIGLPPHRCHLFREDGTACKRL 363 >SMc04140 [G] COG3839 ABC-type sugar transport systems, ATPase components Sme Sinorhizobium meliloti Length = 360 Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 148/271 (54%), Positives = 190/271 (70%), Gaps = 3/271 (1%) Query: 1 MSLYDNMAFGLKIAGKSKAEIDAAVQHAAKILHIDHLLDRKPRALSGGQRQRVAIGRAIT 60 MS+Y N+AFGL+ AG KAEI+ V+ AA+IL I+ LLDRKP+ALSGGQRQRVAIGRAI Sbjct: 91 MSVYKNLAFGLETAGFKKAEIEPKVRRAAEILQIEKLLDRKPKALSGGQRQRVAIGRAIV 150 Query: 61 RQPSVFLFDEPLSNLDAALRVKMRLEFAKLHDDLKTTMIYVTHDQIEAMTLADKIVVLSE 120 R+P +FLFDEPLSNLDA LRV+MR+E ++LH DL TMIYVTHDQ+EAMT+ADKIVVL+ Sbjct: 151 REPRIFLFDEPLSNLDAELRVQMRVEISRLHRDLGNTMIYVTHDQVEAMTMADKIVVLNS 210 Query: 121 GRIEQVGSPQQLYHHPANRFVAGFIGSPKMNFIDGTVAAIQADGVQVQLPGGGLQWAAVE 180 GRIEQVG+P LY++P NRFVAGFIGSPKMNF+ +A + +++ GG ++ Sbjct: 211 GRIEQVGAPLDLYNNPVNRFVAGFIGSPKMNFLKARIADVTGSETAIEVCGGTIRLPRRL 270 Query: 181 GSALQVGQKVSLGVRPEHLNIAQGQAAL-QARCTALELLGDFSYLYAAYEGSEDALILRV 239 A Q GQ V+ G+RPEHL+ +G L +E LG + LY + L + + Sbjct: 271 NGATQ-GQDVTFGIRPEHLSAREGGIELATVNVEIVENLGGETMLYGITPDRQQ-LTVAL 328 Query: 240 PDSLNPPHGSVLPLAADPARCHLFGADGQAL 270 GS L + DP+RCH+FGADG+A+ Sbjct: 329 EGQQKVERGSNLAVHFDPSRCHVFGADGRAM 359 >malK [G] COG3839 ABC-type sugar transport systems, ATPase components Eco Escherichia coli K12 Length = 371 Score = 285 bits (730), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 149/278 (53%), Positives = 186/278 (66%), Gaps = 7/278 (2%) Query: 1 MSLYDNMAFGLKIAGKSKAEIDAAVQHAAKILHIDHLLDRKPRALSGGQRQRVAIGRAIT 60 +S+ +NM+FGLK+AG K I+ V A++L + HLLDRKP+ALSGGQRQRVAIGR + Sbjct: 90 LSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLV 149 Query: 61 RQPSVFLFDEPLSNLDAALRVKMRLEFAKLHDDLKTTMIYVTHDQIEAMTLADKIVVLSE 120 +PSVFL DEPLSNLDAALRV+MR+E ++LH L TMIYVTHDQ+EAMTLADKIVVL Sbjct: 150 AEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDA 209 Query: 121 GRIEQVGSPQQLYHHPANRFVAGFIGSPKMNFIDGTVAAIQADGVQVQLPGGGLQ--WAA 178 GR+ QVG P +LYH+PA+RFVAGFIGSPKMNF+ V A D VQV+LP Q W Sbjct: 210 GRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLP 269 Query: 179 VEGSALQVGQKVSLGVRPEHL---NIAQGQAALQARCTALELLGDFSYLYAAYEGSEDAL 235 VE +QVG +SLG+RPEHL +IA L+ +E LG+ + ++ L Sbjct: 270 VESRDVQVGANMSLGIRPEHLLPSDIA--DVILEGEVQVVEQLGNETQIHIQIPSIRQNL 327 Query: 236 ILRVPDSLNPPHGSVLPLAADPARCHLFGADGQALPRL 273 + R D + G+ + P RCHLF DG A RL Sbjct: 328 VYRQNDVVLVEEGATFAIGLPPERCHLFREDGTACRRL 365