BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0248.p         (140 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0457 [S] COG3536 Uncharacterized protein conserved in bacteri...   168   4e-42
BMEI1018 [S] COG3536 Uncharacterized protein conserved in bacter...   116   2e-26
NMA0955 [S] COG3536 Uncharacterized protein conserved in bacteri...   114   8e-26
NMB0742 [S] COG3536 Uncharacterized protein conserved in bacteri...   113   1e-25
AGc3112 [S] COG3536 Uncharacterized protein conserved in bacteri...   112   3e-25

>RSc0457 [S] COG3536 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 138

 Score =  168 bits (425), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 83/137 (60%), Positives = 99/137 (72%), Gaps = 6/137 (4%)

Query: 5   SSPVPVSFKVRKLSRVVEVEFDDGVMYALPFELMRVYSPSAEVRGHGPGQEVLQTGKREV 64
            +P P    V   SRV+E+ F DG  + LPFE +RV SPSAEV+GHGPGQEVLQTGKREV
Sbjct: 7   DTPQPTGITVHTQSRVLEIVFADGKQFRLPFEYLRVLSPSAEVQGHGPGQEVLQTGKREV 66

Query: 65  EIHGIEPVGNYGVKPLFSDGHASGIFTWDYLYQLGRDQAALWEAYLQKLEAAGFTRESGR 124
            I G+EPVGNY ++PLFSDGH SGI+ W YLY+LG +Q ALW+AYL +L AAG  R++  
Sbjct: 67  GIVGVEPVGNYAIRPLFSDGHDSGIYDWAYLYRLGAEQDALWQAYLDRLAAAGLDRDA-- 124

Query: 125 DHQPEA-GGGHGCGHAH 140
              P A G GH CGH H
Sbjct: 125 ---PMAPGAGHACGHGH 138


>BMEI1018 [S] COG3536 Uncharacterized protein conserved in bacteria Bme
           Brucella melitensis
          Length = 119

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 74/113 (65%)

Query: 9   PVSFKVRKLSRVVEVEFDDGVMYALPFELMRVYSPSAEVRGHGPGQEVLQTGKREVEIHG 68
           P   +V +  +++ V FD+G  + L  EL+RV SPSAEV+GH P Q V   GKR VEI  
Sbjct: 6   PTQLRVSRDRKLLSVAFDNGQKFDLTAELLRVLSPSAEVQGHSPEQRVTVGGKRNVEIMR 65

Query: 69  IEPVGNYGVKPLFSDGHASGIFTWDYLYQLGRDQAALWEAYLQKLEAAGFTRE 121
           I+P+GNY V+  F D H +G+F+W YL++LG ++  LW+ YL +L   G TR+
Sbjct: 66  IDPIGNYAVRITFDDMHDTGLFSWTYLHKLGVEKDTLWQNYLDELAKKGLTRD 118


>NMA0955 [S] COG3536 Uncharacterized protein conserved in bacteria NmA
           Neisseria meningitidis Z2491
          Length = 130

 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 1/113 (0%)

Query: 8   VPVSFKVRKLSRVVEVEFDDGVMYALPFELMRVYSPSAEVRGHGPGQEVLQTGKREVEIH 67
           +PV  ++ K   V+ + + D     LP E +RVYSPSAEVRGHG GQ+VLQTGK +V+I 
Sbjct: 12  IPVEIRLLKNRTVLVLTYGDEPK-NLPAEFLRVYSPSAEVRGHGVGQDVLQTGKADVQIT 70

Query: 68  GIEPVGNYGVKPLFSDGHASGIFTWDYLYQLGRDQAALWEAYLQKLEAAGFTR 120
            ++PVG Y +K  FSDGH SG++ W YL++L     A+W+ YL KL AAG +R
Sbjct: 71  DLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQEYLDKLAAAGASR 123


>NMB0742 [S] COG3536 Uncharacterized protein conserved in bacteria Nme
           Neisseria meningitidis MC58
          Length = 119

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/115 (49%), Positives = 78/115 (67%), Gaps = 1/115 (0%)

Query: 6   SPVPVSFKVRKLSRVVEVEFDDGVMYALPFELMRVYSPSAEVRGHGPGQEVLQTGKREVE 65
           + +PV  ++ K   V+ + + D     LP E +RVYSPSAEVRGHG GQ+VLQTGK +V+
Sbjct: 2   NNIPVEIRLLKNRTVLVLTYGDEPK-NLPAEFLRVYSPSAEVRGHGVGQDVLQTGKADVQ 60

Query: 66  IHGIEPVGNYGVKPLFSDGHASGIFTWDYLYQLGRDQAALWEAYLQKLEAAGFTR 120
           I  ++PVG Y +K  FSDGH SG++ W YL++L     A+W+ YL KL AAG +R
Sbjct: 61  IADLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQEYLDKLAAAGASR 115


>AGc3112 [S] COG3536 Uncharacterized protein conserved in bacteria Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 122

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/117 (48%), Positives = 72/117 (61%)

Query: 5   SSPVPVSFKVRKLSRVVEVEFDDGVMYALPFELMRVYSPSAEVRGHGPGQEVLQTGKREV 64
           S   P    V K  R + V FDDG +Y L  E++RV SPSAEV+GHGPGQ+V   GKR+V
Sbjct: 2   SDAWPTELLVSKDRRELTVSFDDGSIYRLGAEMLRVLSPSAEVQGHGPGQKVTVPGKRDV 61

Query: 65  EIHGIEPVGNYGVKPLFSDGHASGIFTWDYLYQLGRDQAALWEAYLQKLEAAGFTRE 121
            I  +   GNY V+ +F DGH SGI+TW YL +LG    AL+  Y ++L   G  RE
Sbjct: 62  TIRSMVATGNYAVRIVFDDGHDSGIYTWKYLKELGETGDALFADYERQLAEKGLNRE 118