BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0230.p         (150 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2872 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Rso ...   236   2e-62
BMEI1945 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Bme...   189   2e-48
SMc01153 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme...   187   5e-48
AGc562 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Atu A...   185   3e-47
Rv1070c [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mtu ...   181   7e-46

>RSc2872 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Rso Ralstonia
           solanacearum
          Length = 258

 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 113/146 (77%), Positives = 128/146 (87%)

Query: 1   MSYENIQVETHEKVGLIRLHRPKALNALSDGLMTELGEALLAFDAQEEIGCIIITGSEKA 60
           MSY++I VET  +VGL+ L+RPKALNAL+D LM ELG ALLAFDA E IG +IITGS+KA
Sbjct: 1   MSYQHILVETRGRVGLVTLNRPKALNALNDALMDELGAALLAFDADEGIGAMIITGSDKA 60

Query: 61  FAAGADISAMAGYDYMDVFKGEFITRNWETLRRIRKPVIAAVAGYALGGGCELAMMCDFI 120
           FAAGADI AMA YD+  V+K E+ITRNWET+RRIRKPVIAAVAGYALGGGCELAMMCD I
Sbjct: 61  FAAGADIGAMADYDFATVYKNEYITRNWETIRRIRKPVIAAVAGYALGGGCELAMMCDII 120

Query: 121 IAADNAKFGQPEIKLGIVPGAGGTQR 146
           +AAD A+FGQPEIKLG +PGAGGTQR
Sbjct: 121 LAADTARFGQPEIKLGTMPGAGGTQR 146


>BMEI1945 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Bme Brucella
           melitensis
          Length = 293

 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 90/146 (61%), Positives = 115/146 (78%), Gaps = 1/146 (0%)

Query: 1   MSYENIQVETHEKVGLIRLHRPKALNALSDGLMTELGEALLAFDAQEEIGCIIITGSEKA 60
           M+YE I VET + VGLIRL+RP+ALNAL+  ++ EL +AL AFDA  ++G +++TGSEKA
Sbjct: 37  MAYETIIVETRDSVGLIRLNRPQALNALNRAVLEELTDALAAFDADGKVGAVVLTGSEKA 96

Query: 61  FAAGADISAMAGYDYMDVFKGEFITRNWETLRRIRKPVIAAVAGYALGGGCELAMMCDFI 120
           FAAGADI  M   +++D +  +    +W+ + RIRKP+IAAV+GYALGGGCELAMMCDFI
Sbjct: 97  FAAGADIKEMQLINFVDAYLQDMFA-DWQKVDRIRKPIIAAVSGYALGGGCELAMMCDFI 155

Query: 121 IAADNAKFGQPEIKLGIVPGAGGTQR 146
           IA  NAKFGQPEI LG +PG GG+QR
Sbjct: 156 IAGSNAKFGQPEITLGAIPGMGGSQR 181


>SMc01153 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme
           Sinorhizobium meliloti
          Length = 257

 Score =  187 bits (476), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 91/146 (62%), Positives = 113/146 (77%), Gaps = 1/146 (0%)

Query: 1   MSYENIQVETHEKVGLIRLHRPKALNALSDGLMTELGEALLAFDAQEEIGCIIITGSEKA 60
           MSYE + VET  +VGLI L+RP+ALNAL+  LM EL  AL AFDA   +G I++ GSEKA
Sbjct: 1   MSYETLLVETQGRVGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKA 60

Query: 61  FAAGADISAMAGYDYMDVFKGEFITRNWETLRRIRKPVIAAVAGYALGGGCELAMMCDFI 120
           FAAGADI  M G D++D +  +F+   WE +   RKP+IAAV+G+ALGGGCELAMMCDFI
Sbjct: 61  FAAGADIKEMQGLDFVDGYLADFLG-GWEHVANARKPMIAAVSGFALGGGCELAMMCDFI 119

Query: 121 IAADNAKFGQPEIKLGIVPGAGGTQR 146
           IA++ AKFGQPEI LG++PG GG+QR
Sbjct: 120 IASETAKFGQPEITLGVIPGMGGSQR 145


>AGc562 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 288

 Score =  185 bits (470), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 90/146 (61%), Positives = 112/146 (76%), Gaps = 1/146 (0%)

Query: 1   MSYENIQVETHEKVGLIRLHRPKALNALSDGLMTELGEALLAFDAQEEIGCIIITGSEKA 60
           + YE I VE  ++VG+I L+RPK LNAL+  L+ EL   L +F A + IG IIITGSEKA
Sbjct: 32  VDYEMILVEKRDEVGVITLNRPKVLNALNSVLLKELRHILSSFSADDSIGAIIITGSEKA 91

Query: 61  FAAGADISAMAGYDYMDVFKGEFITRNWETLRRIRKPVIAAVAGYALGGGCELAMMCDFI 120
           FAAGADI  M G D++D + G+F+   W+ +   RKPVIAAV+G+ALGGGCELAMMCDFI
Sbjct: 92  FAAGADIKEMQGLDFVDAYVGDFLG-GWDEVAATRKPVIAAVSGFALGGGCELAMMCDFI 150

Query: 121 IAADNAKFGQPEIKLGIVPGAGGTQR 146
           IA+D AKFGQPEI LG++PG GG+QR
Sbjct: 151 IASDTAKFGQPEITLGVIPGMGGSQR 176


>Rv1070c [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mtu
           Mycobacterium tuberculosis H37Rv
          Length = 257

 Score =  181 bits (458), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 105/146 (71%), Gaps = 1/146 (0%)

Query: 1   MSYENIQVETHEKVGLIRLHRPKALNALSDGLMTELGEALLAFDAQEEIGCIIITGSEKA 60
           M+YE I VE  ++VG+I L+RP+ALNAL+  +M E+  A    D   +IG IIITGS KA
Sbjct: 1   MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKA 60

Query: 61  FAAGADISAMAGYDYMDVFKGEFITRNWETLRRIRKPVIAAVAGYALGGGCELAMMCDFI 120
           FAAGADI  MA   + D F  +F    W  L  +R P IAAVAGYALGGGCELAMMCD +
Sbjct: 61  FAAGADIKEMADLTFADAFTADFFA-TWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVL 119

Query: 121 IAADNAKFGQPEIKLGIVPGAGGTQR 146
           IAAD AKFGQPEIKLG++PG GG+QR
Sbjct: 120 IAADTAKFGQPEIKLGVLPGMGGSQR 145