BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0220.p (244 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl381 [E] COG1126 ABC-type polar amino acid transport system, A... 314 1e-85 AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ... 303 3e-82 AGpA331 [E] COG1126 ABC-type polar amino acid transport system, ... 295 5e-80 SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ... 287 1e-77 AGc2571 [E] COG1126 ABC-type polar amino acid transport system, ... 280 3e-75 >AGl381 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 151/240 (62%), Positives = 195/240 (81%), Gaps = 1/240 (0%) Query: 5 VKIKDLHKSFGSNKVLNGVSLDVQKGQMVAIIGKSGSGKSTLLRCLNGLEKVDAGDIQVC 64 V ++++HKSFG+ +VL GVSL V +G++ A+IG+SGSGKSTLLRC+NGLEK+++G I++ Sbjct: 4 VIVENVHKSFGALEVLKGVSLTVGRGEVFALIGRSGSGKSTLLRCMNGLEKINSGRIEIA 63 Query: 65 GHDIHHPDKLNLRELRKQVGIVFQSYNLFPHLTVERNITLALTTIKKMSTEQAKTIAHKV 124 GH + D LR+LR VGIVFQSYNLFPHLTV NI LA +K ++ + K IA +V Sbjct: 64 GHALGG-DATALRKLRTDVGIVFQSYNLFPHLTVGENIMLAPRIVKDVAKSETKDIAREV 122 Query: 125 LQLVGLENKKDAYPEQLSGGQAQRVAIARSLAMAPELMLFDEVTSALDPELTAEVLKVME 184 LQLVGL K D+YP+QLSGGQ QRVAIARSLAM P++MLFDEVTSALDPELT EVL VME Sbjct: 123 LQLVGLSEKFDSYPDQLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTEEVLTVME 182 Query: 185 DLARGGMTMVLVTHEMAFARKLADVLVFMHQGQVWEIGPPDELFSHPKTAELQKFVASDL 244 +LA+GGMTM+LVTHEMAFAR++A +FMH+G++WE G ELF++P+T EL++FV +D+ Sbjct: 183 NLAKGGMTMILVTHEMAFARRVATETIFMHKGKIWEQGRSAELFANPQTPELRQFVKADV 242 >AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 148/240 (61%), Positives = 185/240 (77%), Gaps = 1/240 (0%) Query: 3 AIVKIKDLHKSFGSNKVLNGVSLDVQKGQMVAIIGKSGSGKSTLLRCLNGLEKVDAGDIQ 62 ++V I +HK +G+ +VL GVSL+V+ GQ+VAIIG+SGSGKST+LRC+NGLE+ +G+I Sbjct: 2 SVVTIDQVHKRYGALEVLKGVSLNVEAGQVVAIIGRSGSGKSTMLRCINGLEEFQSGNIT 61 Query: 63 VCGHDIHHPDKLNLRELRKQVGIVFQSYNLFPHLTVERNITLALTTIKKMSTEQAKTIAH 122 GH + D+ LR+LRK VGIVFQSYNLFPHLTV NI L+ + ++ A +A Sbjct: 62 AAGHRVEQ-DQTKLRQLRKDVGIVFQSYNLFPHLTVGENIMLSPKITQDVARADADVLAR 120 Query: 123 KVLQLVGLENKKDAYPEQLSGGQAQRVAIARSLAMAPELMLFDEVTSALDPELTAEVLKV 182 KVL VGL K DAYP+ LSGGQ QRVAIARSLAM P++MLFDEVTSALDPELT EVL V Sbjct: 121 KVLAQVGLAEKFDAYPDMLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTGEVLLV 180 Query: 183 MEDLARGGMTMVLVTHEMAFARKLADVLVFMHQGQVWEIGPPDELFSHPKTAELQKFVAS 242 ME LAR GMTM+LVTHEM+FAR +A V VFMHQG++WE+G +LF P+T ELQ F+++ Sbjct: 181 MEQLAREGMTMLLVTHEMSFARSVAHVTVFMHQGKIWEMGASKQLFEKPQTPELQAFLSN 240 >AGpA331 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 143/239 (59%), Positives = 187/239 (78%), Gaps = 1/239 (0%) Query: 3 AIVKIKDLHKSFGSNKVLNGVSLDVQKGQMVAIIGKSGSGKSTLLRCLNGLEKVDAGDIQ 62 A+V+IK++ K++G +VL GVSLDV+KG++V IIG+SGSGKSTLLRC+N LE +++G+I Sbjct: 2 ALVEIKNVRKNYGPLEVLKGVSLDVEKGEIVTIIGRSGSGKSTLLRCINALETINSGEIL 61 Query: 63 VCGHDIHHPDKLNLRELRKQVGIVFQSYNLFPHLTVERNITLALTTIKKMSTEQAKTIAH 122 + G + + LR++R++VGIVFQ++NLFPH+T+E+N+TLA + A+ +A Sbjct: 62 LEGQPVS-ANMDGLRQMRQKVGIVFQAFNLFPHMTIEKNVTLAPVLTGRTDKRGARELAL 120 Query: 123 KVLQLVGLENKKDAYPEQLSGGQAQRVAIARSLAMAPELMLFDEVTSALDPELTAEVLKV 182 VL+ VGL +K AYPEQLSGGQ QRVAIAR LAM+P LMLFDEVTSALDPEL EVLKV Sbjct: 121 SVLERVGLADKLKAYPEQLSGGQQQRVAIARCLAMSPHLMLFDEVTSALDPELVGEVLKV 180 Query: 183 MEDLARGGMTMVLVTHEMAFARKLADVLVFMHQGQVWEIGPPDELFSHPKTAELQKFVA 241 ME++A GMTMVLVTHEM+FAR +A LVFMHQG+VWE G P LF+ P+T EL+ F+ Sbjct: 181 MEEMAAQGMTMVLVTHEMSFARNVATKLVFMHQGRVWEQGDPKRLFADPQTPELKSFIG 239 >SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Sme Sinorhizobium meliloti Length = 243 Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 142/242 (58%), Positives = 181/242 (74%), Gaps = 1/242 (0%) Query: 3 AIVKIKDLHKSFGSNKVLNGVSLDVQKGQMVAIIGKSGSGKSTLLRCLNGLEKVDAGDIQ 62 ++V K++ KSFG +VL GVSL V+ G++VA+IG SGSGKST LRCLNGLE VD+G+I+ Sbjct: 2 SVVVAKNIRKSFGGLQVLKGVSLTVEGGEVVALIGGSGSGKSTFLRCLNGLESVDSGEIE 61 Query: 63 VCGHDIHHPDKLNLRELRKQVGIVFQSYNLFPHLTVERNITLALTTIKKMSTEQAKTIAH 122 V GH + LR LR+ VGIVFQSYNLFPHLT NI LA +K + + A++ A Sbjct: 62 VAGHRMSR-KPAELRRLRRDVGIVFQSYNLFPHLTAGENIMLAPVQVKGIGKDAARSEAK 120 Query: 123 KVLQLVGLENKKDAYPEQLSGGQAQRVAIARSLAMAPELMLFDEVTSALDPELTAEVLKV 182 + L LVGL ++ +AYP+ LSGGQ QRVAIARSLAM P+++LFDEVTSALDPELT EVL V Sbjct: 121 RCLSLVGLGDRFEAYPDMLSGGQQQRVAIARSLAMQPKVLLFDEVTSALDPELTGEVLAV 180 Query: 183 MEDLARGGMTMVLVTHEMAFARKLADVLVFMHQGQVWEIGPPDELFSHPKTAELQKFVAS 242 +E LAR GMTM+LVTHEM FAR++A+ +FM G + E GP E FS PKT EL+ F+ + Sbjct: 181 IEKLARDGMTMILVTHEMGFARRVANRTIFMRDGIIHEEGPSAEFFSSPKTPELRAFLHA 240 Query: 243 DL 244 ++ Sbjct: 241 EV 242 >AGc2571 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 244 Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 133/239 (55%), Positives = 186/239 (77%), Gaps = 1/239 (0%) Query: 3 AIVKIKDLHKSFGSNKVLNGVSLDVQKGQMVAIIGKSGSGKSTLLRCLNGLEKVDAGDIQ 62 ++++I ++ KS+GSN+VL G++LDV+ G+++AIIGKSGSGKSTLLRC+NGLE + AG I Sbjct: 2 SLIEITEVRKSYGSNEVLKGINLDVEPGEVIAIIGKSGSGKSTLLRCINGLETISAGSIS 61 Query: 63 VCGHDIHHPDKLNLRELRKQVGIVFQSYNLFPHLTVERNITLALTTIKKMSTEQAKTIAH 122 V G + D L+L+ LR +VG++FQ +NLFPH TV N+ L+ T +KK +A+ +A Sbjct: 62 VAGAQLLD-DDLHLKALRLKVGMIFQQFNLFPHQTVGGNVMLSQTVVKKTPKPEAEAVAR 120 Query: 123 KVLQLVGLENKKDAYPEQLSGGQAQRVAIARSLAMAPELMLFDEVTSALDPELTAEVLKV 182 +L+ VGL +K DAYP++LSGGQ QRVAIAR+LAM P +L DE+TSALDPEL +EVL V Sbjct: 121 TMLERVGLAHKFDAYPDELSGGQQQRVAIARALAMQPIALLCDEITSALDPELVSEVLAV 180 Query: 183 MEDLARGGMTMVLVTHEMAFARKLADVLVFMHQGQVWEIGPPDELFSHPKTAELQKFVA 241 + +LA GMT+++VTHEM FAR + +VFMH+G+V EIGPP+E+FS+P T EL++F+ Sbjct: 181 VRELAGEGMTLLMVTHEMKFARDVCSRVVFMHEGRVHEIGPPEEVFSNPATPELKQFLG 239