BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0199.p (231 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0483 [E] COG0765 ABC-type amino acid transport system, permea... 224 1e-58 PA1340 [E] COG0765 ABC-type amino acid transport system, permeas... 213 2e-55 STM0663 [E] COG0765 ABC-type amino acid transport system, permea... 205 6e-53 gltK [E] COG0765 ABC-type amino acid transport system, permease ... 204 2e-52 ZgltK [E] COG0765 ABC-type amino acid transport system, permease... 204 2e-52 >RSc0483 [E] COG0765 ABC-type amino acid transport system, permease component Rso Ralstonia solanacearum Length = 227 Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 120/227 (52%), Positives = 151/227 (66%), Gaps = 2/227 (0%) Query: 1 MFSNFDFDVIQRSWFYLFTTGLKFTLILTFSAMAGGIILGTLLAMMRLSSNKPLSFIATT 60 M FDF + + G+ +L +T +A+ GI+ GTLLAMMRLS KPL + Sbjct: 1 MAYQFDFTSVNADNLRVLGEGMVLSLEITATAILVGIVWGTLLAMMRLSGIKPLQWFGQA 60 Query: 61 YVNLIRSIPLVLVIFWFYFLVPFIGAWMIGASEPIQVGAFQSALITFILFEAAYYCEIMR 120 YVNL RSIPLV+V+ WF+ +VP + + S P SAL+ F LFEAAYY EI+R Sbjct: 61 YVNLFRSIPLVMVLLWFFLIVPQVLQKLFNLS-PATDMRMTSALVAFALFEAAYYSEIIR 119 Query: 121 SGIQSIPRGQVFAGYAIGMNYWQMMGNVVLPQAFRNMTPILLTQTIVLFQDVSLVYVLGS 180 +GIQS+ RGQ+FA YA+GM Y Q M V+LPQAFRNM P+LLTQ I+LFQD SLVYV + Sbjct: 120 AGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLVYV-SA 178 Query: 181 VPDFVTSASKIAQRDGRLVEMYLFVAVVYFVLSFGLSTLVKRFQKKI 227 + DF T A I +RDGR+VE+ LF YFV+ FG S LVKR QKK+ Sbjct: 179 LSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKRLQKKV 225 >PA1340 [E] COG0765 ABC-type amino acid transport system, permease component Pae Pseudomonas aeruginosa Length = 222 Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 115/209 (55%), Positives = 146/209 (69%), Gaps = 3/209 (1%) Query: 21 GLKFTLILTFSAMAGGIILGTLLAMMRLSSNKPLSFIATTYVNLIRSIPLVLVIFWFYFL 80 G+ TL L + GG+ LGT+LA+MRLS +K LS IA YVN RSIPL+LVI WFYF Sbjct: 17 GMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 76 Query: 81 VPFIGAWMIGASEPIQVGAFQSALITFILFEAAYYCEIMRSGIQSIPRGQVFAGYAIGMN 140 VPFI W+ G P VGAF S L+ F++FEAAYYCEI+R+GIQ+IP+GQ+ A A+GM Sbjct: 77 VPFILRWITGEDTP--VGAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMT 134 Query: 141 YWQMMGNVVLPQAFRNMTPILLTQTIVLFQDVSLVYVLGSVPDFVTSASKIAQRDGRLVE 200 Y Q M V+LPQAFR MTP+LL Q+I+LFQD SLVY +G + DF+ SA G+ E Sbjct: 135 YGQTMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVG-LMDFLNSARSRGDIIGQANE 193 Query: 201 MYLFVAVVYFVLSFGLSTLVKRFQKKIAI 229 +F +VYFV+SF S VKR QK++ + Sbjct: 194 FLIFAGLVYFVVSFTASFAVKRLQKRLTV 222 >STM0663 [E] COG0765 ABC-type amino acid transport system, permease component Sty Salmonella typhimurium LT2 Length = 224 Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 116/223 (52%), Positives = 149/223 (66%), Gaps = 3/223 (1%) Query: 4 NFDFDVIQRSWFYLFTTGLKFTLILTFSAMAGGIILGTLLAMMRLSSNKPLSFIATTYVN 63 FD+ I S YL GL TL +T +A+ GI+ GT+LA+MRLSS P+++ A YVN Sbjct: 3 EFDWSSIIPSLPYLLA-GLVITLKITVTAVIVGIVWGTILAVMRLSSFAPIAWFAKAYVN 61 Query: 64 LIRSIPLVLVIFWFYFLVPFIGAWMIGASEPIQVGAFQSALITFILFEAAYYCEIMRSGI 123 + RSIPLV+V+ WFY +VP ++G S + SA++ F +FEAAYY EI+R+GI Sbjct: 62 VFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDI-RLISAMVAFSMFEAAYYSEIIRAGI 120 Query: 124 QSIPRGQVFAGYAIGMNYWQMMGNVVLPQAFRNMTPILLTQTIVLFQDVSLVYVLGSVPD 183 QSI RGQ A A+GM +WQ M ++LPQAFR M P+LLTQ IVLFQD SLVYVL S+ D Sbjct: 121 QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVL-SLAD 179 Query: 184 FVTSASKIAQRDGRLVEMYLFVAVVYFVLSFGLSTLVKRFQKK 226 F +AS I +RDG VEM LF VYFV+S S LV +K+ Sbjct: 180 FFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222 >gltK [E] COG0765 ABC-type amino acid transport system, permease component Eco Escherichia coli K12 Length = 224 Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 117/225 (52%), Positives = 150/225 (66%), Gaps = 3/225 (1%) Query: 4 NFDFDVIQRSWFYLFTTGLKFTLILTFSAMAGGIILGTLLAMMRLSSNKPLSFIATTYVN 63 FD+ I S YL GL TL +T +A+ GI+ GT+LA+MRLSS P+++ A YVN Sbjct: 3 EFDWSSIVPSLPYLLD-GLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVN 61 Query: 64 LIRSIPLVLVIFWFYFLVPFIGAWMIGASEPIQVGAFQSALITFILFEAAYYCEIMRSGI 123 + RSIPLV+V+ WFY +VP ++G S P SA++ F +FEAAYY EI+R+GI Sbjct: 62 VFRSIPLVMVLLWFYLIVPGFLQNVLGLS-PKNDIRLISAMVAFSMFEAAYYSEIIRAGI 120 Query: 124 QSIPRGQVFAGYAIGMNYWQMMGNVVLPQAFRNMTPILLTQTIVLFQDVSLVYVLGSVPD 183 QSI RGQ A A+GM +WQ M ++LPQAFR M P+LLTQ IVLFQD SLVYVL S+ D Sbjct: 121 QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVL-SLAD 179 Query: 184 FVTSASKIAQRDGRLVEMYLFVAVVYFVLSFGLSTLVKRFQKKIA 228 F +AS I +RDG VEM LF VYFV+S S LV +++ A Sbjct: 180 FFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224 >ZgltK [E] COG0765 ABC-type amino acid transport system, permease component EcZ Escherichia coli O157:H7 EDL933 Length = 224 Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 117/225 (52%), Positives = 150/225 (66%), Gaps = 3/225 (1%) Query: 4 NFDFDVIQRSWFYLFTTGLKFTLILTFSAMAGGIILGTLLAMMRLSSNKPLSFIATTYVN 63 FD+ I S YL GL TL +T +A+ GI+ GT+LA+MRLSS P+++ A YVN Sbjct: 3 EFDWSSIVPSLPYLLD-GLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVN 61 Query: 64 LIRSIPLVLVIFWFYFLVPFIGAWMIGASEPIQVGAFQSALITFILFEAAYYCEIMRSGI 123 + RSIPLV+V+ WFY +VP ++G S P SA++ F +FEAAYY EI+R+GI Sbjct: 62 VFRSIPLVMVLLWFYLIVPGFLQNVLGLS-PKNDIRLISAMVAFSMFEAAYYSEIIRAGI 120 Query: 124 QSIPRGQVFAGYAIGMNYWQMMGNVVLPQAFRNMTPILLTQTIVLFQDVSLVYVLGSVPD 183 QSI RGQ A A+GM +WQ M ++LPQAFR M P+LLTQ IVLFQD SLVYVL S+ D Sbjct: 121 QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVL-SLAD 179 Query: 184 FVTSASKIAQRDGRLVEMYLFVAVVYFVLSFGLSTLVKRFQKKIA 228 F +AS I +RDG VEM LF VYFV+S S LV +++ A Sbjct: 180 FFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224