BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0194.p         (148 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0489 [O] COG1765 Predicted redox protein, regulator of disulf...   221   4e-58
PA0653 [O] COG1765 Predicted redox protein, regulator of disulfi...   163   1e-40
mll0741 [O] COG1765 Predicted redox protein, regulator of disulf...   149   2e-36
SMb20271 [O] COG1765 Predicted redox protein, regulator of disul...   142   3e-34
yhfA [O] COG1765 Predicted redox protein, regulator of disulfide...   138   5e-33

>RSc0489 [O] COG1765 Predicted redox protein, regulator of disulfide bond
           formation Rso Ralstonia solanacearum
          Length = 148

 Score =  221 bits (564), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 102/135 (75%), Positives = 117/135 (86%)

Query: 1   VRWTGLSGMTFTAETGSGHLLTMDGAPDGGGRNLAPRPMEVVLAGTGGCTAYDVVVILRK 60
           V WTG  GM F AETGSGHL+TMDGAPDGGGRNLAPRPME+VL GTGGCTAYDVV+IL++
Sbjct: 5   VSWTGPDGMAFLAETGSGHLVTMDGAPDGGGRNLAPRPMEMVLLGTGGCTAYDVVLILKR 64

Query: 61  SGQDVRGCDVTLKSERADTDPKVFTKIHFHFTVRGRNLKPNVVERAIKLSHDKYCSASIM 120
             QDV+GC V L +ERA+TDPKVFT+IHF FTV GRNLK   VERA++LSH+KYCSASIM
Sbjct: 65  GRQDVQGCSVKLLAERAETDPKVFTRIHFTFTVTGRNLKRETVERAVQLSHEKYCSASIM 124

Query: 121 LEKTAEMTHSFEIID 135
           L KTAE+THS E++D
Sbjct: 125 LAKTAEITHSLELVD 139


>PA0653 [O] COG1765 Predicted redox protein, regulator of disulfide bond
           formation Pae Pseudomonas aeruginosa
          Length = 140

 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 1   VRWTGLSGMTFTAETGSGHLLTMDGAPDGGGRNLAPRPMEVVLAGTGGCTAYDVVVILRK 60
           ++W G +   F  E+GSGH++ MDG PD GGRNL  RPME+VL G GGCT +DVV IL+K
Sbjct: 5   IQWAGEA--MFLGESGSGHVVVMDGPPDHGGRNLGVRPMEMVLIGLGGCTNFDVVSILKK 62

Query: 61  SGQDVRGCDVTLKSERADTDPKVFTKIHFHFTVRGRNLKPNVVERAIKLSHDKYCSASIM 120
           + Q V  C+  L++ERAD +PKVFTKIH HF V+GR LK   V+RA++LS +KYCSASIM
Sbjct: 63  ARQPVESCEAFLEAERADEEPKVFTKIHVHFVVKGRGLKEAQVKRAVELSAEKYCSASIM 122

Query: 121 LEKTA-EMTHSFEIID 135
           L +   E+TH +EI++
Sbjct: 123 LGRGGVEITHDYEIVE 138


>mll0741 [O] COG1765 Predicted redox protein, regulator of disulfide bond
           formation Mlo Mesorhizobium loti
          Length = 141

 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/135 (54%), Positives = 93/135 (68%), Gaps = 2/135 (1%)

Query: 1   VRWTGLSGMTFTAETGSGHLLTMDGAPDGGGRNLAPRPMEVVLAGTGGCTAYDVVVILRK 60
           ++W  +   TF  E+GSGH L +  A    G+   P PME+VL GTGGC+AYDVV IL K
Sbjct: 5   IKW--VEERTFIGESGSGHKLVLGTASGPDGKTPGPSPMELVLIGTGGCSAYDVVHILEK 62

Query: 61  SGQDVRGCDVTLKSERADTDPKVFTKIHFHFTVRGRNLKPNVVERAIKLSHDKYCSASIM 120
             + V  C V L ++RA+TDPKVFT+IH HF V+GR L  + V+RAI LS +KYCSAS M
Sbjct: 63  GREAVEDCVVELDADRAETDPKVFTRIHMHFIVKGRALSSDKVQRAINLSIEKYCSASAM 122

Query: 121 LEKTAEMTHSFEIID 135
           + KTA +TH FE+ID
Sbjct: 123 MAKTATITHDFEVID 137


>SMb20271 [O] COG1765 Predicted redox protein, regulator of disulfide bond
           formation Sme Sinorhizobium meliloti
          Length = 143

 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 94/142 (66%), Gaps = 3/142 (2%)

Query: 1   VRWTGLSGMTFTAETGSGHLLTMDGAPDGGGRNLAPRPMEVVLAGTGGCTAYDVVVILRK 60
           ++W  + G TF  E+GSGH +    A         P PME+VL GTGGC+A+DVV IL K
Sbjct: 5   IKW--VEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHILEK 62

Query: 61  SGQDVRGCDVTLKSERADTDPKVFTKIHFHFTVRGRNLKPNVVERAIKLSHDKYCSASIM 120
             + V  C V + ++RAD DP+VFT+IH HF V+GR L    VERA+ LS +KYCSAS M
Sbjct: 63  GREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSASAM 122

Query: 121 LEKTAEMTHSFEIIDDLTDTSS 142
           L KTA +TH FE++ D +DT++
Sbjct: 123 LAKTATITHDFEVV-DTSDTAA 143


>yhfA [O] COG1765 Predicted redox protein, regulator of disulfide bond
           formation Eco Escherichia coli K12
          Length = 134

 Score =  138 bits (347), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/134 (50%), Positives = 91/134 (67%), Gaps = 6/134 (4%)

Query: 1   VRWTGLSGMTFTAETGSGHLLTMDGAPDGGGRNLAPRPMEVVLAGTGGCTAYDVVVILRK 60
           V+W  + G+TF  E+ SGH + MDG  + G +  AP PME+VL   GGC+A DVV IL+K
Sbjct: 5   VKW--VEGLTFLGESASGHQILMDG--NSGDK--APSPMEMVLMAAGGCSAIDVVSILQK 58

Query: 61  SGQDVRGCDVTLKSERADTDPKVFTKIHFHFTVRGRNLKPNVVERAIKLSHDKYCSASIM 120
             QDV  C+V L SER +  P++FT I+ HF V GR+LK   V RA+ LS +KYCS ++M
Sbjct: 59  GRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALM 118

Query: 121 LEKTAEMTHSFEII 134
           LEK   +THS+E++
Sbjct: 119 LEKAVNITHSYEVV 132