BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0179.p         (77 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0672_2 [NT] COG0643 Chemotaxis protein histidine kinase and r...    63   1e-10

>RSc0672_2 [NT] COG0643 Chemotaxis protein histidine kinase and related kinases
            Rso Ralstonia solanacearum
          Length = 1200

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query: 2    AVLADHVSGNREVVVKPVGPQLATLAGVVGATVLGDGQIVLIINPL 47
            AV  D V GNREVVVK +GP LA L G+ GAT LGDG+IVLI NP+
Sbjct: 1118 AVHVDEVIGNREVVVKHIGPHLARLEGIAGATTLGDGEIVLIYNPV 1163