BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0172.p         (60 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2223 [L] COG1722 Exonuclease VII small subunit Rso Ralstonia ...    74   9e-14

>RSc2223 [L] COG1722 Exonuclease VII small subunit Rso Ralstonia
          solanacearum
          Length = 94

 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 48/60 (80%), Gaps = 1/60 (1%)

Query: 1  VAQMEAGELPLEASVAAYKRGSELVRFCAAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 60
          VA ME+GELPLEAS+AAY+RG+ELVR+C   L++V+ QV++L+GD LKP  A E   E+G
Sbjct: 34 VASMESGELPLEASLAAYRRGAELVRYCQQVLERVEQQVRVLDGDALKPL-AGEGTNEQG 92