BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0114.p (263 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr8461 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mlo ... 242 6e-64 SMc01806 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme... 196 4e-50 AF1641 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Afu A... 183 4e-46 SSO2624 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sso ... 153 3e-37 AF0963 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Afu A... 145 7e-35 >mlr8461 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mlo Mesorhizobium loti Length = 273 Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 124/250 (49%), Positives = 168/250 (67%), Gaps = 6/250 (2%) Query: 15 QGITTLTLNRPQHFNALSEEMLTALQAQLDDIKSDSTVRCVILAANGKAFCAGHDLRQM- 73 +G+ LTL P NALS ++ AL A+LD K+D TVR +IL+A GK FCAGHDL++M Sbjct: 22 KGVLRLTLANPPA-NALSLAVMAALTAELDRAKADKTVRVIILSAAGKVFCAGHDLKEMT 80 Query: 74 ----QATPQQSYYQTLFHRCSQLMQSLRELPVPVIAKVQGLATAAGCQLVATCDLAIAAE 129 A +++++ F C+QLMQ++ P+PVIA+V GLATAAG QLVA+CD+AIA+ Sbjct: 81 ARRADADRGKAFFEETFAACAQLMQAIVRHPMPVIAEVDGLATAAGLQLVASCDVAIASH 140 Query: 130 SARFAVSGINVGLFCSTPAVALTRNLPIKRAFEMLVTGKFIDAATAAAWGLINQAVPAQE 189 A F G+N+GLFCSTP VAL+RN+ K A EML+TG+ IDAATA +GL+N+ VP + Sbjct: 141 EATFCTPGVNIGLFCSTPMVALSRNVSRKHAMEMLLTGETIDAATAKEFGLVNRVVPREY 200 Query: 190 LDGATQALAREICSKPAISIARGKAMVYRQQMMALPDAYAHAAEVMACNIMDPEAQEGIT 249 L+ A+ I SK ++ + GK Y Q M L DAYA+ VM N++ +A+EGI Sbjct: 201 LNQIVTKYAQTIASKSSLVVKTGKEAFYAQAEMGLADAYAYTGRVMVENMLARDAEEGIG 260 Query: 250 AFLDKRKPNW 259 AF+ KRKP W Sbjct: 261 AFIGKRKPEW 270 >SMc01806 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme Sinorhizobium meliloti Length = 273 Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 117/263 (44%), Positives = 159/263 (60%), Gaps = 6/263 (2%) Query: 2 KDHHPDILGREDQQGITTLTLNRPQHFNALSEEMLTALQAQLDDIKSDSTVRCVILAANG 61 K+ L RE + LTLN P N LS ++ AL A L++ ++ V++AA G Sbjct: 9 KEESNGPLLREFNGPVLRLTLNNPPA-NVLSTALMEALLAALEEASVSKEIKVVVIAATG 67 Query: 62 KAFCAGHDLRQM---QATPQ--QSYYQTLFHRCSQLMQSLRELPVPVIAKVQGLATAAGC 116 K F AGHDL++M +A P +++++ +++M ++ LP VIA+V GLATAAGC Sbjct: 68 KLFSAGHDLKEMTSHRADPDGGRAFFERTIRLAAEVMLTITRLPQAVIAEVDGLATAAGC 127 Query: 117 QLVATCDLAIAAESARFAVSGINVGLFCSTPAVALTRNLPIKRAFEMLVTGKFIDAATAA 176 QLVA+CDLAI +++ F G+N+GLFCSTP VALTR K+A EML+TG+ IDA TA Sbjct: 128 QLVASCDLAICTDTSTFCTPGVNIGLFCSTPMVALTRAAHRKQAMEMLLTGETIDAGTAK 187 Query: 177 AWGLINQAVPAQELDGATQALAREICSKPAISIARGKAMVYRQQMMALPDAYAHAAEVMA 236 +GL+N+ VP Q L A I SK ++ GK YRQ M L DAY A VM Sbjct: 188 EFGLVNRIVPQQYLRQVIDKYASIIASKSPQALKIGKEAFYRQAEMPLADAYDFAVGVMV 247 Query: 237 CNIMDPEAQEGITAFLDKRKPNW 259 N++ +A+EGI AFL KR P W Sbjct: 248 ENMLARDAEEGIGAFLGKRMPEW 270 >AF1641 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Afu Archaeoglobus fulgidus Length = 254 Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 101/252 (40%), Positives = 153/252 (60%), Gaps = 3/252 (1%) Query: 9 LGREDQQGITTLTLNRPQHFNALSEEMLTALQAQLDDIKSDSTVRCVILAANGKAFCAGH 68 L +++ + ++LNRP+ NALS E+L L+ + I + VR V++ G+AF +GH Sbjct: 4 LKYQERGKVGIISLNRPETRNALSLELLQELEDLIRKISEERLVRVVVIRGEGRAFSSGH 63 Query: 69 DLRQ-MQATPQQSYYQTLFHRCSQLMQSLRELPVPVIAKVQGLATAAGCQLVATCDLAIA 127 DL++ + P + + LF++C + M ++R+ P P IA VQG+ATAAGCQLVA CD+A+A Sbjct: 64 DLKEILDRHPIE--VEKLFNQCYRAMLAIRDAPQPYIAMVQGVATAAGCQLVAACDMAVA 121 Query: 128 AESARFAVSGINVGLFCSTPAVALTRNLPIKRAFEMLVTGKFIDAATAAAWGLINQAVPA 187 A+SA FA G+ +GLFC TP ++R + K+AFEM TG+FI A A +GL+N+ V Sbjct: 122 AKSALFATPGVKIGLFCYTPIAFVSRAVGRKKAFEMGFTGEFITADEALQFGLVNRVVED 181 Query: 188 QELDGATQALAREICSKPAISIARGKAMVYRQQMMALPDAYAHAAEVMACNIMDPEAQEG 247 ++L+ T LA + + GK Y+Q M A A A E ++ +A+EG Sbjct: 182 EKLEEETMKLAESVARYSLNVLESGKRFFYKQLFMEDFQALAFATESISLYSSTEDAKEG 241 Query: 248 ITAFLDKRKPNW 259 I AF +KR+P W Sbjct: 242 IRAFFEKREPMW 253 >SSO2624 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sso Sulfolobus solfataricus Length = 266 Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 88/244 (36%), Positives = 126/244 (51%), Gaps = 4/244 (1%) Query: 17 ITTLTLNRPQHFNALSEEMLTALQAQLDDIKSDSTVRCVILAANGKAFCAGHDLRQMQAT 76 I + LNRP NA++ +M+ L L+ + +D ++ VI+ NGKAF AG D+++M T Sbjct: 20 IGIIKLNRPDKLNAINFQMVDELVDVLNKLDNDDKIKVVIITGNGKAFSAGADVKEMLET 79 Query: 77 PQQSYYQTLFHRCSQLMQSLRELPVPVIAKVQGLATAAGCQLVATCDLAIAAESARFAVS 136 P + + + L + LR PVIA + G+ G +L CD+ IA+ESA+ Sbjct: 80 PLE---EIMKKGHMPLWEKLRTFKKPVIAALNGITAGGGLELAMACDIIIASESAKLGQP 136 Query: 137 GINVGLFCSTPAVA-LTRNLPIKRAFEMLVTGKFIDAATAAAWGLINQAVPAQELDGATQ 195 IN+G+ LTR L +A E+++TGK ID+ A +GL+N+ VP L Sbjct: 137 EINLGIMPGAGGTQRLTRVLGKYKAMELVLTGKLIDSKEAERYGLVNKVVPDNSLIDEAI 196 Query: 196 ALAREICSKPAISIARGKAMVYRQQMMALPDAYAHAAEVMACNIMDPEAQEGITAFLDKR 255 LAREI KP ISI K V R L + EA+EG+ AFL+KR Sbjct: 197 RLAREIAEKPIISIILAKEAVARAWDTLLQQGLDFERRNFYLALNTKEAKEGMRAFLEKR 256 Query: 256 KPNW 259 KP W Sbjct: 257 KPRW 260 >AF0963 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Afu Archaeoglobus fulgidus Length = 259 Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 134/248 (54%), Gaps = 2/248 (0%) Query: 13 DQQGITTLTLNRPQHFNALSEEMLTALQAQLDDIKSDSTVRCVILAANGKAFCAGHDLRQ 72 ++ G+ + NRP+ NA++++ + L+ +D +++ TVR ++L GKAFCAG D++ Sbjct: 8 EEDGVLWVKFNRPEALNAINKDFVKGLREVVDYARNNKTVRVIVLTGEGKAFCAGADIK- 66 Query: 73 MQATPQQSYYQTLFHRCSQLMQSLRELPVPVIAKVQGLATAAGCQLVATCDLAIAAESAR 132 M + ++ ++++ + +L VPVIA + G A GC++ CD+ IA+E A Sbjct: 67 MFSESSHFVARSTIEELGKVLEEMEDLEVPVIAAINGFALGGGCEIAMACDIIIASERAS 126 Query: 133 FAVSGINVGLFCSTPAV-ALTRNLPIKRAFEMLVTGKFIDAATAAAWGLINQAVPAQELD 191 F IN+G+ L R + K+A E+ +TG+ I A A GL+N+ V +L Sbjct: 127 FGQPEINLGIIPGAGGTQRLARIVGWKKAMELCLTGERISAEEAYRLGLVNKVVEHDKLM 186 Query: 192 GATQALAREICSKPAISIARGKAMVYRQQMMALPDAYAHAAEVMACNIMDPEAQEGITAF 251 + +A I SK ++ K V R M L D + ++ A + P+A+EGI AF Sbjct: 187 DEAKKMAEVIKSKSPYAVMLVKQAVNRGFKMGLRDGIMYERDLFALSFSSPDAEEGIKAF 246 Query: 252 LDKRKPNW 259 ++KRK ++ Sbjct: 247 VEKRKADF 254