BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0084.p (130 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0170 Non COG 78 4e-15 >PA0170 Non COG Length = 126 Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 76/127 (59%), Gaps = 5/127 (3%) Query: 1 MDNLFIAASASSPEVDFRFEQRQLSLKGESYPENAAQFWGEIIATLRRFLADDSADAPLT 60 M +L I + S+P + ++ +LS++G+SYPEN+ + +G++I + RFLAD PL Sbjct: 1 MSDLHIPGTQSTPAIQGDWQAGRLSMQGDSYPENSYELFGQVIDWVERFLAD--GQRPLE 58 Query: 61 VNVALAYFNSSSTKMLFSLFDALNEKAEAGTEVILNWYHDEDDDTIFEFGQELQED--FP 118 +++ L Y N+SS K + + D L E + G V L W++D ++ + E +E +ED FP Sbjct: 59 LDLRLLYLNTSSIKAMMDILDLLEEAHQGGRPVSLRWHYDRRNERVAELAEEFREDCSFP 118 Query: 119 -ALVFHD 124 A+ HD Sbjct: 119 FAIQAHD 125