BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0050.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z4859 [R] COG0824 Predicted thioesterase EcZ Escherichia coli O1...   144   6e-35
ECs4334 [R] COG0824 Predicted thioesterase Ecs Escherichia coli ...   144   6e-35
RSp0364 [R] COG0824 Predicted thioesterase Rso Ralstonia solanac...   142   2e-34
CAC0271 [R] COG0824 Predicted thioesterase Cac Clostridium aceto...    65   5e-11
lin1320 [R] COG0824 Predicted thioesterase Lin Listeria innocua        61   7e-10

>Z4859 [R] COG0824 Predicted thioesterase EcZ Escherichia coli O157:H7
           EDL933
          Length = 140

 Score =  144 bits (364), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/140 (50%), Positives = 90/140 (64%), Gaps = 1/140 (0%)

Query: 13  LANSP-WRGEVELQIQFYDLDPMEIVWHGRYVEYMEAARCALLDGIGYNYPAMKQSGYGW 71
           + N P +  EVEL I F+D+D M + WHG Y  Y E AR ALL+   Y Y  MK+SGY W
Sbjct: 1   MLNDPRFTAEVELTIPFHDVDMMGVAWHGNYFRYFEVAREALLNQFNYGYRQMKESGYLW 60

Query: 72  PVIDLHLRYAAPARFGQRIRVSAAIVEWENRLRIDYLISDAASGARLTRASTVQVAVQMN 131
           PV+D  ++Y     F QRIRV A I E+ENRLRI Y I DA +G R T   T+QVAV   
Sbjct: 61  PVVDARVKYRHALTFEQRIRVRAHIEEFENRLRIGYQIFDAETGKRATTGYTIQVAVDEQ 120

Query: 132 NHEMCFVSPPVLWHKLGLTP 151
           + E+CFVSP +L+ ++G+ P
Sbjct: 121 SRELCFVSPDILFERMGVKP 140


>ECs4334 [R] COG0824 Predicted thioesterase Ecs Escherichia coli O157:H7
          Length = 140

 Score =  144 bits (364), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/140 (50%), Positives = 90/140 (64%), Gaps = 1/140 (0%)

Query: 13  LANSP-WRGEVELQIQFYDLDPMEIVWHGRYVEYMEAARCALLDGIGYNYPAMKQSGYGW 71
           + N P +  EVEL I F+D+D M + WHG Y  Y E AR ALL+   Y Y  MK+SGY W
Sbjct: 1   MLNDPRFTAEVELTIPFHDVDMMGVAWHGNYFRYFEVAREALLNQFNYGYRQMKESGYLW 60

Query: 72  PVIDLHLRYAAPARFGQRIRVSAAIVEWENRLRIDYLISDAASGARLTRASTVQVAVQMN 131
           PV+D  ++Y     F QRIRV A I E+ENRLRI Y I DA +G R T   T+QVAV   
Sbjct: 61  PVVDARVKYRHALTFEQRIRVRAHIEEFENRLRIGYQIFDAETGKRATTGYTIQVAVDEQ 120

Query: 132 NHEMCFVSPPVLWHKLGLTP 151
           + E+CFVSP +L+ ++G+ P
Sbjct: 121 SRELCFVSPDILFERMGVKP 140


>RSp0364 [R] COG0824 Predicted thioesterase Rso Ralstonia solanacearum
          Length = 144

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 89/133 (66%)

Query: 15  NSPWRGEVELQIQFYDLDPMEIVWHGRYVEYMEAARCALLDGIGYNYPAMKQSGYGWPVI 74
            +P      +++ F+D+D M + WHG Y++Y E  R ALL    Y+YP M+ SGY WPV+
Sbjct: 6   RAPLSASARIEVPFHDVDAMAVCWHGHYLKYFEIGRAALLRAFDYDYPEMRASGYLWPVV 65

Query: 75  DLHLRYAAPARFGQRIRVSAAIVEWENRLRIDYLISDAASGARLTRASTVQVAVQMNNHE 134
           + HL+Y  PA +GQRI V A ++E+ENRL+I Y I+D ASG RLT+  T+QVAV     E
Sbjct: 66  EAHLKYIRPATYGQRIEVRATLIEYENRLKIGYEIADCASGQRLTKGHTIQVAVCAATSE 125

Query: 135 MCFVSPPVLWHKL 147
           + FVSP V++ K+
Sbjct: 126 LQFVSPAVVFEKV 138


>CAC0271 [R] COG0824 Predicted thioesterase Cac Clostridium acetobutylicum
          Length = 138

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 24  LQIQFYDLDPMEIVWHGRYVEYMEAARCALLDGIGYNYPAMKQSGYGWPVIDLHLRYAAP 83
           +++++ + D M IV+H  Y  Y EAAR  L++G G  Y  M+  G   P+++   +Y   
Sbjct: 8   IKVRYAETDKMGIVYHANYYVYFEAAREDLIEGAGIKYSDMEDIGIMMPLVETKCKYHEG 67

Query: 84  ARFGQRIRVSAAIVEWE-NRLRIDYLISDAASGARLTRASTVQVAVQMNNHEMCFV--SP 140
           A++G  I V   + +    ++ I+Y +   + G  L    T QV V   N ++  +  S 
Sbjct: 68  AKYGDYILVETTLGKLSPIKVEINYRVLRESDGKLLAEGQTTQVFVDAQNFKIIKLMKSY 127

Query: 141 PVLWHKL 147
           P +W KL
Sbjct: 128 PEVWEKL 134


>lin1320 [R] COG0824 Predicted thioesterase Lin Listeria innocua
          Length = 122

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 8/103 (7%)

Query: 34  MEIVWHGRYVEYMEAARCALLDGIGYNYPAMKQSGYGWPVIDLHLRYAAPARFGQRIRVS 93
           M +V+H  Y+ +ME  R  L++ +G+ Y  M+++GY  PV+D+H+ Y  P R+GQ+  V 
Sbjct: 1   MGVVYHNNYLVWMEIGRTRLIEQLGFRYFDMEEAGYLSPVLDVHIHYGKPLRYGQKAVVK 60

Query: 94  AAIVEWENRLRIDYLISDAASGARLTRASTVQVAVQMNNHEMC 136
             I  ++  LR+ Y       G  +    T +VA+      +C
Sbjct: 61  TWIKGYDG-LRVTY-------GYEICYEGTNEVAITGETEHVC 95