BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0047.p (262 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0366_1 [M] COG0463 Glycosyltransferases involved in cell wall... 275 6e-74 ECs4333_1 [M] COG0463 Glycosyltransferases involved in cell wall... 271 1e-72 Z4858_1 [M] COG0463 Glycosyltransferases involved in cell wall b... 271 1e-72 RSc0436 [M] COG0463 Glycosyltransferases involved in cell wall b... 178 1e-44 MA2169 [M] COG0463 Glycosyltransferases involved in cell wall bi... 88 2e-17 >RSp0366_1 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Rso Ralstonia solanacearum Length = 257 Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 140/241 (58%), Positives = 167/241 (69%) Query: 8 RTVVVIPVFDHEHAIGAVVAAVRSHGLPCILVDDGCSPGCAAVLRQLAAADPQAITLLVH 67 R +VIP+++H+ IG VA + +HGLP +VDDG AVL LA +TLL Sbjct: 2 RPCIVIPIYNHKDVIGLTVARLVTHGLPIFIVDDGSDAPTQAVLAALAGQHAGCVTLLRL 61 Query: 68 PHNQGKGGAVMTGLRHAAAAGYTHALQIDADGQHDSADIPRFLAASQAAPQAVINGRPVY 127 P N GKG AVM GLR A + G+THALQIDADGQHD+AD+P F+ A++ P+AVI G+PVY Sbjct: 62 PVNGGKGAAVMAGLRAARSDGFTHALQIDADGQHDAADVPTFMDAARDHPEAVILGQPVY 121 Query: 128 DESVPKGRLYARYLTHVWVWINTLSLEIVDSMCGFRLYPLAPTLQLIDRTTIGRRMDFDT 187 D +VPK RLY RYLTH WVWI TLS +I DSMCGFR+YPLA LID + RMDFD Sbjct: 122 DATVPKARLYGRYLTHAWVWIETLSFDIRDSMCGFRVYPLALACALIDEVALPTRMDFDI 181 Query: 188 EILVRLYWRGLRVHNLATRVRYPADGVSHFQVWLDNVLISRMHARLFLGMLLRAPLLLGR 247 EILVRL+WR R + TRV Y ADGVSHF V DN+ IS+ HARL GML+R PLLL Sbjct: 182 EILVRLHWRRTRFVAIPTRVTYAADGVSHFDVLWDNIRISQSHARLVAGMLVRLPLLLAN 241 Query: 248 S 248 Sbjct: 242 K 242 >ECs4333_1 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Ecs Escherichia coli O157:H7 Length = 246 Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 132/244 (54%), Positives = 170/244 (69%), Gaps = 1/244 (0%) Query: 4 SVAHRTVVVIPVFDHEHAIGAVVAAVRSHGLPCILVDDGCSPGCAAVLRQLAAADPQAIT 63 SV V+IP ++H + V+A ++ LPCI+VDDG L L A P +T Sbjct: 2 SVNFSPCVLIPCYNHGAMMPGVLARLKPFNLPCIVVDDGSDATTQQQLDSLLAEQP-GVT 60 Query: 64 LLVHPHNQGKGGAVMTGLRHAAAAGYTHALQIDADGQHDSADIPRFLAASQAAPQAVING 123 L+ N GKG AVM GL+ AA AG++HA+Q+DADGQH DIP+ LA ++ P A+I+G Sbjct: 61 LIRLAENAGKGAAVMRGLQAAADAGFSHAVQVDADGQHAIEDIPKLLALAEQQPAALISG 120 Query: 124 RPVYDESVPKGRLYARYLTHVWVWINTLSLEIVDSMCGFRLYPLAPTLQLIDRTTIGRRM 183 +P+YD+S+P+ RLY R++THVWVWI TLSL++ DSMCGFR+YP+APTLQL TIG+RM Sbjct: 121 QPIYDDSIPRSRLYGRWVTHVWVWIETLSLQLKDSMCGFRVYPVAPTLQLAKHATIGKRM 180 Query: 184 DFDTEILVRLYWRGLRVHNLATRVRYPADGVSHFQVWLDNVLISRMHARLFLGMLLRAPL 243 DFDTE++VRLYW+G + + TRV YP DG+SHF DNV IS MH RLF GML R P Sbjct: 181 DFDTEVMVRLYWQGNTSYFVPTRVTYPLDGLSHFDALKDNVRISLMHTRLFFGMLPRIPS 240 Query: 244 LLGR 247 LL R Sbjct: 241 LLMR 244 >Z4858_1 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis EcZ Escherichia coli O157:H7 EDL933 Length = 246 Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 132/244 (54%), Positives = 170/244 (69%), Gaps = 1/244 (0%) Query: 4 SVAHRTVVVIPVFDHEHAIGAVVAAVRSHGLPCILVDDGCSPGCAAVLRQLAAADPQAIT 63 SV V+IP ++H + V+A ++ LPCI+VDDG L L A P +T Sbjct: 2 SVNFSPCVLIPCYNHGAMMPGVLARLKPFNLPCIVVDDGSDATTQQQLDSLLAEQP-GVT 60 Query: 64 LLVHPHNQGKGGAVMTGLRHAAAAGYTHALQIDADGQHDSADIPRFLAASQAAPQAVING 123 L+ N GKG AVM GL+ AA AG++HA+Q+DADGQH DIP+ LA ++ P A+I+G Sbjct: 61 LIRLAENAGKGAAVMRGLQAAADAGFSHAVQVDADGQHAIEDIPKLLALAEQQPAALISG 120 Query: 124 RPVYDESVPKGRLYARYLTHVWVWINTLSLEIVDSMCGFRLYPLAPTLQLIDRTTIGRRM 183 +P+YD+S+P+ RLY R++THVWVWI TLSL++ DSMCGFR+YP+APTLQL TIG+RM Sbjct: 121 QPIYDDSIPRSRLYGRWVTHVWVWIETLSLQLKDSMCGFRVYPVAPTLQLAKHATIGKRM 180 Query: 184 DFDTEILVRLYWRGLRVHNLATRVRYPADGVSHFQVWLDNVLISRMHARLFLGMLLRAPL 243 DFDTE++VRLYW+G + + TRV YP DG+SHF DNV IS MH RLF GML R P Sbjct: 181 DFDTEVMVRLYWQGNTSYFVPTRVTYPLDGLSHFDALKDNVRISLMHTRLFFGMLPRIPS 240 Query: 244 LLGR 247 LL R Sbjct: 241 LLMR 244 >RSc0436 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Rso Ralstonia solanacearum Length = 257 Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 111/249 (44%), Positives = 148/249 (59%), Gaps = 7/249 (2%) Query: 3 ASVAHRTVVVIPVFDHEHAIGAVVAAVRSHGLPCILVDDGCSPGCAAVLRQLAAADPQAI 62 AS H +V+IP ++ + V + R+H P +V DG + G AA L+ +A DP + Sbjct: 6 ASATH--LVLIPSYNPGIKVDDTVRSARAHWNPVWVVVDGSTDGSAARLQAMAERDP-GL 62 Query: 63 TLLVHPHNQGKGGAVMTGLRHAAAAGYTHALQIDADGQHDSADIPRFLAASQAAPQAVIN 122 ++V P N+GKG AV+ GL AA G+TH L +D+DGQH + IP F+AASQAAP A++ Sbjct: 63 HVMVLPRNRGKGVAVLAGLEAAAERGFTHVLTMDSDGQHPADLIPAFMAASQAAPDAMVL 122 Query: 123 GRPVYDESVPKGRLYARYLTHVWVWINTLSLEIVDSMCGFRLYPLAPTLQLIDRTTIGRR 182 GRP +D S P+ R+ R L++V I TL I DS+ GFR+YP+AP + ++ R R Sbjct: 123 GRPRFDASAPQLRVQGRRLSNVCTDIETLWAGIGDSLFGFRIYPIAPLVVIMRRQRRWMR 182 Query: 183 -MDFDTEILVRLYWRGLRVHNLATRVRY---PADGVSHFQVWLDNVLISRMHARLFLGML 238 DFD E VRL W G+R L VRY GVSHF DNVL+ MH RL G L Sbjct: 183 GFDFDPEAAVRLCWAGVRPIRLDAPVRYFRAAEGGVSHFHYGRDNVLLIWMHLRLLFGCL 242 Query: 239 LRAPLLLGR 247 R PLL+ R Sbjct: 243 CRLPLLVAR 251 >MA2169 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Mac Methanosarcina acetivorans str.C2A Length = 322 Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 13/210 (6%) Query: 6 AHRTVVVIPVFDHEHAIGAVVAAVRSHGLPCILVDDGCSPGCAAVLRQLAAADPQAITLL 65 + V++P F+ E +IG++V + + I+VDDG S A + R+ A ++ Sbjct: 27 SQNITVILPAFNEEVSIGSIVLLTKFYSDNVIVVDDGSSDRTAEISRKAGAH------VI 80 Query: 66 VHPHNQGKGGAVMTGLRHAAAAGYTHALQIDADGQHDSADIPRFLAASQAAPQAVINGRP 125 VH N+GKG A+ TG AA G + +D+DGQH+ A+IP+ + ++NG Sbjct: 81 VHEVNKGKGAALKTGFEAAANLGADIIVTMDSDGQHNPAEIPKLVTPIIDGYAEMVNGSR 140 Query: 126 VY---DESVPKGRLYARYLTHVWVWINTLSLEIVDSMCGFRLYPLAPTLQLIDRTTIGRR 182 D++ P R + + +N+ L I DS GFR + A T + G Sbjct: 141 YLSHKDKNTPIYRRVGQTILDTATNMNS-GLRITDSQSGFRAFA-ASTKNVFRFGAHG-- 196 Query: 183 MDFDTEILVRLYWRGLRVHNLATRVRYPAD 212 M ++E+L GLR+ + VRY D Sbjct: 197 MAIESEMLADAGRSGLRIKEVEIGVRYDVD 226