BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0019.p (200 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0912 Non COG 169 3e-42 NMA2148 [G] COG2956 Predicted N-acetylglucosaminyl transferase N... 125 8e-29 NMB0339 [G] COG2956 Predicted N-acetylglucosaminyl transferase N... 123 2e-28 STM1708 [G] COG2956 Predicted N-acetylglucosaminyl transferase S... 101 9e-22 yciM [G] COG2956 Predicted N-acetylglucosaminyl transferase Eco ... 101 1e-21 >RSc0912 Non COG Length = 425 Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 126/226 (55%), Gaps = 30/226 (13%) Query: 2 RTNTEAAMALLEKALAADRKSVRATMLMGDALRAQGDIEGALETWRRVEHQSVPHTALVA 61 R + AA+ LE+AL + K+VRAT+ +GD +GD EGA++ WR +E Q+ LVA Sbjct: 193 RKDVSAAVEWLERALQENPKNVRATIQLGDVALGKGDTEGAIKRWRSIEQQNPAFLPLVA 252 Query: 62 QRLMDGYVAVGRVQEGINLLRAYLAEAPSIDLLEVVFKAVLEVDGVDAANLLVSDELRRT 121 +RLM Y +GR EG+ LR+ + +LL+VV++ L+V G+D A L+ +++RR Sbjct: 253 ERLMKAYAQLGRAAEGLAWLRSKMDARLGPELLDVVYRYELDVHGIDDAVALMREQIRRQ 312 Query: 122 PTLLALDKFLEARMMNAPQTARSE------------------------------LSVVKT 151 P+L+AL + +EA A + E L ++ Sbjct: 313 PSLMALTRLVEAEATRASEAVSHEAAAVAAPISDSALADPVEAGSNADIQRAQDLGAIRD 372 Query: 152 LVHGYTQKLARYQCSHCGFKARQFYWQCPGCSRWETYPPRRTEELN 197 L+ T+ LARY C CGF+AR FYWQCPGC+RWETY PRRTE L Sbjct: 373 LLQSRTRNLARYTCQECGFRARLFYWQCPGCNRWETYAPRRTEALG 418 >NMA2148 [G] COG2956 Predicted N-acetylglucosaminyl transferase NmA Neisseria meningitidis Z2491 Length = 389 Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 111/194 (57%) Query: 1 VRTNTEAAMALLEKALAADRKSVRATMLMGDALRAQGDIEGALETWRRVEHQSVPHTALV 60 ++N +AA + KAL A++K RA M++GD QG+ A+E + +E Q+ + ++V Sbjct: 195 FKSNFDAARFNVGKALEANKKCTRANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMV 254 Query: 61 AQRLMDGYVAVGRVQEGINLLRAYLAEAPSIDLLEVVFKAVLEVDGVDAANLLVSDELRR 120 ++L + Y A G+ +EG+N L Y+ P +DL+ VV++ L + A + +RR Sbjct: 255 GEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRR 314 Query: 121 TPTLLALDKFLEARMMNAPQTARSELSVVKTLVHGYTQKLARYQCSHCGFKARQFYWQCP 180 P L + + L ++ + +++ ++++++ Q+ Y+C +C FK++ F+W CP Sbjct: 315 KPDLNGVYRLLGLKLSDLDPAWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCP 374 Query: 181 GCSRWETYPPRRTE 194 C++W+T+ P + E Sbjct: 375 ACNKWQTFTPNKIE 388 >NMB0339 [G] COG2956 Predicted N-acetylglucosaminyl transferase Nme Neisseria meningitidis MC58 Length = 389 Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 110/194 (56%) Query: 1 VRTNTEAAMALLEKALAADRKSVRATMLMGDALRAQGDIEGALETWRRVEHQSVPHTALV 60 ++N + A + KAL A++K RA M++GD QG+ A+E + +E Q+ + ++V Sbjct: 195 FKSNFDVARFNVGKALEANKKCTRANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMV 254 Query: 61 AQRLMDGYVAVGRVQEGINLLRAYLAEAPSIDLLEVVFKAVLEVDGVDAANLLVSDELRR 120 ++L + Y A G+ +EG+N L Y+ P +DL+ VV++ L + A + +RR Sbjct: 255 GEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRR 314 Query: 121 TPTLLALDKFLEARMMNAPQTARSELSVVKTLVHGYTQKLARYQCSHCGFKARQFYWQCP 180 P L + + L ++ + +++ ++++++ Q+ Y+C +C FK++ F+W CP Sbjct: 315 KPDLNGVYRLLGLKLSDMNPAWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCP 374 Query: 181 GCSRWETYPPRRTE 194 C++W+T+ P + E Sbjct: 375 ACNKWQTFTPNKIE 388 >STM1708 [G] COG2956 Predicted N-acetylglucosaminyl transferase Sty Salmonella typhimurium LT2 Length = 389 Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 3/191 (1%) Query: 4 NTEAAMALLEKALAADRKSVRATMLMGDALRAQGDIEGALETWRRVEHQSVPHTALVAQR 63 + + AMALL+K AAD+ S R +++MG A+GD A+E+ +RV Q + + Sbjct: 195 DMDRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQDKELVSETLEM 254 Query: 64 LMDGYVAVGRVQEGINLLRAYLAEAPSIDLLEVVFKAVLEV-DGVDAANLLVSDELRRTP 122 L Y +G+ E LR + E E++ +LE +G DAA + ++ +L+R P Sbjct: 255 LQTCYQQLGKNAEWAEFLRRAVEENTGAGA-ELMLADILEAREGSDAAQVYITRQLQRHP 313 Query: 123 TLLALDKFLEARMMNAPQT-ARSELSVVKTLVHGYTQKLARYQCSHCGFKARQFYWQCPG 181 T+ K ++ + A + A+ L V++ +V + RY+C CGF A YW CP Sbjct: 314 TMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEQVRSKPRYRCQKCGFTAYTLYWHCPS 373 Query: 182 CSRWETYPPRR 192 C W T P R Sbjct: 374 CRAWSTIKPIR 384 >yciM [G] COG2956 Predicted N-acetylglucosaminyl transferase Eco Escherichia coli K12 Length = 389 Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 3/191 (1%) Query: 4 NTEAAMALLEKALAADRKSVRATMLMGDALRAQGDIEGALETWRRVEHQSVPHTALVAQR 63 + + AM LL+K AAD+ S R +++MG A+G+ A+E+ +RV Q + + Sbjct: 195 DLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEM 254 Query: 64 LMDGYVAVGRVQEGINLLRAYLAEAPSIDLLEVVFKAVLEV-DGVDAANLLVSDELRRTP 122 L Y +G+ E L+ + E D E++ ++E DG +AA + ++ +L+R P Sbjct: 255 LQTCYQQLGKTAEWAEFLQRAVEENTGAD-AELMLADIIEARDGSEAAQVYITRQLQRHP 313 Query: 123 TLLALDKFLEARMMNAPQT-ARSELSVVKTLVHGYTQKLARYQCSHCGFKARQFYWQCPG 181 T+ K ++ + A + A+ L V++ +V + RY+C CGF A YW CP Sbjct: 314 TMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPS 373 Query: 182 CSRWETYPPRR 192 C W T P R Sbjct: 374 CRAWSTIKPIR 384