BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0504.p         (93 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

HI0395 [S] COG2914 Uncharacterized protein conserved in bacteria...    89   2e-18
VC0850 [S] COG2914 Uncharacterized protein conserved in bacteria...    87   1e-17
PM0166 [S] COG2914 Uncharacterized protein conserved in bacteria...    86   2e-17
Z3911 [S] COG2914 Uncharacterized protein conserved in bacteria ...    80   9e-16
ECs3480 [S] COG2914 Uncharacterized protein conserved in bacteri...    80   9e-16

>HI0395 [S] COG2914 Uncharacterized protein conserved in bacteria Hin
          Haemophilus influenzae
          Length = 102

 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%)

Query: 1  VQLCYAAPGLQILRDLEVQPGCTIQQAILDSGLLRQHPAIDLSACKVGIFGKVKPLETAL 60
          +++ YA P    L+  +V  G T+Q AI  SG+L Q P IDLS  K+GIF +   L   L
Sbjct: 6  IEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVL 65

Query: 61 RQRDRIEIYRPLIADPKQSRRRRA 84
          ++ DRIEIYRPL+ADPK+ RR+RA
Sbjct: 66 KEGDRIEIYRPLLADPKEIRRKRA 89


>VC0850 [S] COG2914 Uncharacterized protein conserved in bacteria Vch
           Vibrio cholerae
          Length = 103

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 1/94 (1%)

Query: 1   VQLCYAAPGLQILRDLEVQPGCTIQQAILDSGLLRQHPAIDLSACKVGIFGKVKPLETAL 60
           V++ YA P  Q +  L V+   T+++ I  SG+L+ +P IDL+  KVGIF +   L+  +
Sbjct: 10  VEVVYALPHEQRVLKLVVEQSATVEEIIRTSGILQMYPEIDLTVNKVGIFSRNVKLDARV 69

Query: 61  RQRDRIEIYRPLIADPKQSRRRRA-QGKEPTTQS 93
           R +DRIEIYRPL+ADPK+ RR+RA Q K    QS
Sbjct: 70  RDKDRIEIYRPLLADPKEIRRKRAEQAKAAANQS 103


>PM0166 [S] COG2914 Uncharacterized protein conserved in bacteria Pmu
          Pasteurella multocida
          Length = 99

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 56/85 (65%)

Query: 1  VQLCYAAPGLQILRDLEVQPGCTIQQAILDSGLLRQHPAIDLSACKVGIFGKVKPLETAL 60
          +++ YA P    L+ L V+ G  IQ AIL SG+L+Q   IDL   KVGIF +   L   L
Sbjct: 6  IEIAYAYPERYYLKKLTVEEGTMIQTAILQSGILQQFTEIDLRENKVGIFSRPAKLTDQL 65

Query: 61 RQRDRIEIYRPLIADPKQSRRRRAQ 85
          +  DRIEIYRPL+ADPK+ RR+RA+
Sbjct: 66 KDGDRIEIYRPLLADPKEIRRKRAE 90


>Z3911 [S] COG2914 Uncharacterized protein conserved in bacteria EcZ
          Escherichia coli O157:H7 EDL933
          Length = 102

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 57/85 (67%)

Query: 1  VQLCYAAPGLQILRDLEVQPGCTIQQAILDSGLLRQHPAIDLSACKVGIFGKVKPLETAL 60
          V++ YA P  Q L+ + +Q G T+++AI  SGLL     IDL+  KVGI+ +   L  ++
Sbjct: 13 VEVAYALPKKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTENKVGIYSRPAKLSDSV 72

Query: 61 RQRDRIEIYRPLIADPKQSRRRRAQ 85
             DR+EIYRPLIADPK+ RR+RA+
Sbjct: 73 HDGDRVEIYRPLIADPKELRRQRAE 97


>ECs3480 [S] COG2914 Uncharacterized protein conserved in bacteria Ecs
          Escherichia coli O157:H7
          Length = 102

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 57/85 (67%)

Query: 1  VQLCYAAPGLQILRDLEVQPGCTIQQAILDSGLLRQHPAIDLSACKVGIFGKVKPLETAL 60
          V++ YA P  Q L+ + +Q G T+++AI  SGLL     IDL+  KVGI+ +   L  ++
Sbjct: 13 VEVAYALPKKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTENKVGIYSRPAKLSDSV 72

Query: 61 RQRDRIEIYRPLIADPKQSRRRRAQ 85
             DR+EIYRPLIADPK+ RR+RA+
Sbjct: 73 HDGDRVEIYRPLIADPKELRRQRAE 97