BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0497.p         (144 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1422 Non COG                                                        88   6e-18

>RSc1422 Non COG
          Length = 142

 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 88/139 (63%), Gaps = 3/139 (2%)

Query: 6   IWLVLAGGLLGAELFTGTFYLLMIALGLVAGAVAAWCGLVLEWQLLVAAVVGVAAVLGLR 65
           +W  LA  L+  EL TGTFYLLM+A+GL+AG +AA  GL    Q ++AA+V V  + GL 
Sbjct: 7   VWFTLAVLLVIGELMTGTFYLLMVAIGLLAGGLAALAGLGFPVQAVLAALVAVIGIAGLW 66

Query: 66  SSPYGRLRQSNSNDDPSLLLDIGQSIEVTAWQAHGTQYLARVPYRGAQWDVELLPGHHAL 125
            + +G   + N+  + ++ LDIG+ + V AW     +  ARV YRGA+WDVEL P   A 
Sbjct: 67  RTRFGHAARENAARNRNVNLDIGEMLRVDAWS---PERRARVQYRGAEWDVELAPPAPAT 123

Query: 126 PGSYVIREIRGSRLLVAPR 144
            G + I E+RG+ L+VAP+
Sbjct: 124 GGEFRIVEVRGNVLVVAPK 142