BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0489.p (262 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value NMA0090 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglu... 332 5e-91 NMB0178 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglu... 330 2e-90 RSc1416 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglu... 303 2e-82 lpxA [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucos... 294 1e-79 STM0228 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglu... 293 4e-79 >NMA0090 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase NmA Neisseria meningitidis Z2491 Length = 258 Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 159/262 (60%), Positives = 196/262 (74%), Gaps = 4/262 (1%) Query: 1 MSKIHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTSIGRDNEIFQ 60 M+ IHP+A+I P A++D SV++GAY VIG +V+IGA T IGPH VI GHTSIG +N IFQ Sbjct: 1 MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHAVINGHTSIGENNRIFQ 60 Query: 61 FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120 FAS+G PQDKKY EPT + IG+ NTIREF TFN GTV G TRIG+DNWIMAY HLA Sbjct: 61 FASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGIGETRIGDDNWIMAYCHLA 120 Query: 121 HDCQLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180 HDC +GN+ I ANNA+LAGHV +GD+V LGG+T V QFC IG +AMTAF A V +DVPP+ Sbjct: 121 HDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCRIGDYAMTAFAAGVHKDVPPY 180 Query: 181 VTAAGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQMEASSA 240 A+G RA PAG+NSEG++R GFT+EQI +K YK +Y G+P EEAK ++ + + A Sbjct: 181 FMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTLYHRGIPFEEAKADILRRAETQA 240 Query: 241 NSAQYIRLFREFIEASARGIIR 262 A +FR+F SARGIIR Sbjct: 241 ELA----VFRDFFAQSARGIIR 258 >NMB0178 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase Nme Neisseria meningitidis MC58 Length = 258 Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 158/262 (60%), Positives = 195/262 (74%), Gaps = 4/262 (1%) Query: 1 MSKIHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTSIGRDNEIFQ 60 M+ IHP+A+I P A++D V++GAY VIG +V+IGA T IGPH VI GHTSIG +N IFQ Sbjct: 1 MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVQIGANTEIGPHAVINGHTSIGENNRIFQ 60 Query: 61 FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120 FAS+G PQDKKY EPT + IG+ NTIREF TFN GTV G TRIG+DNWIMAY HLA Sbjct: 61 FASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGIGETRIGDDNWIMAYCHLA 120 Query: 121 HDCQLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180 HDC +GN+ I ANNA+LAGHV +GD+V LGG+T V QFC IG +AMTAF A V +DVPP+ Sbjct: 121 HDCVIGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCRIGDYAMTAFAAGVHKDVPPY 180 Query: 181 VTAAGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQMEASSA 240 A+G RA PAG+NSEG++R GFT+EQI +K YK +Y G+P EEAK ++ + + A Sbjct: 181 FMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTLYHRGIPFEEAKADILRRAETQA 240 Query: 241 NSAQYIRLFREFIEASARGIIR 262 A +FR+F SARGIIR Sbjct: 241 ELA----VFRDFFAQSARGIIR 258 >RSc1416 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase Rso Ralstonia solanacearum Length = 271 Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 144/268 (53%), Positives = 197/268 (73%), Gaps = 6/268 (2%) Query: 1 MSKIHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTSIGRDNEIFQ 60 + KIHP+A+I P A++ VE+GA+ VIG +VRI +GTRIG H V+EG+T++GRDN+I Sbjct: 4 VQKIHPTAVIDPQAELAPDVEVGAFTVIGPNVRIDSGTRIGHHTVVEGYTTLGRDNQIGH 63 Query: 61 FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120 FAS+G PQD KY EPT + +GDRNTIREF T + GT QD G T IG+DNWIMAYVH+A Sbjct: 64 FASVGGRPQDMKYRDEPTRLIVGDRNTIREFTTIHTGTAQDVGITSIGDDNWIMAYVHIA 123 Query: 121 HDCQLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180 HDC++GN+ + ++NA +AGHV +GD LGG + VHQF IGAHAM +A+ QDVPPF Sbjct: 124 HDCRIGNHTVFSSNAQIAGHVEVGDWAILGGMSGVHQFVRIGAHAMLGGASALVQDVPPF 183 Query: 181 VTAA----GNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQME 236 V AA GN+A P G+N GL+RRGF++EQI +++AYK++Y++ L ++A+ E+A Sbjct: 184 VIAASDKGGNKAAPHGVNVVGLQRRGFSAEQIAGLRQAYKLLYKSDLSFDQAQAEIAAQV 243 Query: 237 ASS--ANSAQYIRLFREFIEASARGIIR 262 A + A S + +R F +FI A+ RGI+R Sbjct: 244 AQTEDAPSREALRTFADFIAATKRGIVR 271 >lpxA [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase Eco Escherichia coli K12 Length = 262 Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 143/259 (55%), Positives = 180/259 (69%), Gaps = 4/259 (1%) Query: 4 IHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTSIGRDNEIFQFAS 63 +HP+AI+ GA I + IG + ++G V IG GT + HVV+ GHT IGRDNEI+QFAS Sbjct: 8 VHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFAS 67 Query: 64 IGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLAHDC 123 IG QD KYAGEPT +EIGDRN IRE VT +RGTVQ G T++G+DN +M H+AHDC Sbjct: 68 IGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDC 127 Query: 124 QLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPFVTA 183 +GN ILANNATLAGHV + D +GG T VHQFC IGAH M + V+QDVPP+V A Sbjct: 128 TVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIA 187 Query: 184 AGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQMEASSANSA 243 GN A P G+N EGLKRRGF+ E I I+ AYK+IYR+G L+E K E+A++ A + Sbjct: 188 QGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAEL----AETY 243 Query: 244 QYIRLFREFIEASARGIIR 262 ++ F +F S RG+IR Sbjct: 244 PEVKAFTDFFARSTRGLIR 262 >STM0228 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase Sty Salmonella typhimurium LT2 Length = 262 Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 144/259 (55%), Positives = 180/259 (69%), Gaps = 4/259 (1%) Query: 4 IHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTSIGRDNEIFQFAS 63 IHP+AI+ GA I + IG + ++G V IG GT + HVV+ G T IGRDNEI+QFAS Sbjct: 8 IHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVLKSHVVVNGQTKIGRDNEIYQFAS 67 Query: 64 IGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLAHDC 123 IG QD KYAGEPT +EIGDRN IRE VT +RGTVQ G T++G+DN +M H+AHDC Sbjct: 68 IGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHVAHDC 127 Query: 124 QLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPFVTA 183 +GN ILANNATLAGHV + D +GG T VHQFC IGAH M + V+QDVPP+V A Sbjct: 128 TVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIA 187 Query: 184 AGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQMEASSANSA 243 GN A P G+N EGLKRRGF+ E ++ I+ AYK++YR+G L+EAK E+A++ A Sbjct: 188 QGNHATPFGVNIEGLKRRGFSREGLVAIRNAYKLLYRSGKTLDEAKLEIAEL----AEKH 243 Query: 244 QYIRLFREFIEASARGIIR 262 ++ F EF E S RG IR Sbjct: 244 PEVKAFTEFFERSTRGPIR 262