BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0429.p (335 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti 273 3e-73 all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 263 6e-70 PA0285_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 244 2e-64 PA1727_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 240 3e-63 PA4601_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 238 2e-62 >SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 257 Score = 273 bits (699), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 131/255 (51%), Positives = 178/255 (69%), Gaps = 1/255 (0%) Query: 71 LRIETGLLHAFEYNELLLYYQPKVDMQTLAITGAEALVRWQHPERGLLLPGEFIPIAEET 130 L+ + L A E LL++QP++ ++T I AEAL+RWQHP RG++ P FIP+AEET Sbjct: 3 LQSQEELREALAREEFLLHFQPQMSLETGRIFAAEALLRWQHPVRGIISPAAFIPLAEET 62 Query: 131 GLIVQLSDWVLDAVCRQARAWKDAGLPPIRIALNVTAREF-TRSLPDRVGAALERHMLSG 189 GLIV + DWVL CRQ +AW+DAGLPP+ +++NV+AR+F R+ RV A LE L Sbjct: 63 GLIVPIGDWVLRTACRQLKAWQDAGLPPLIVSVNVSARQFRERNWAARVAAVLEETCLEA 122 Query: 190 EWLELEITESMLMHSTDRVISIMEKICGLGITVSLDDFGTGYSSLSYLKRFPINTLKIDR 249 +LELE+TES++M I+ M + +G+ +++DDFGTGYSSLS LKRFP+ LKIDR Sbjct: 123 RYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKIDR 182 Query: 250 SFTMGIPDDTNDCAIASAIIGIAKQLRHKVIAEGVEDEKQFNFLREAGCNELQGYIFSRP 309 SF IP D +D AI SAII +A++L +VIAEGVE E Q FL+++GC E+QGY FS+P Sbjct: 183 SFVTDIPHDADDMAITSAIISLAQKLGLRVIAEGVETEAQVEFLQKSGCGEIQGYFFSQP 242 Query: 310 VPAPDFHAMLLEGRK 324 +P DF +L R+ Sbjct: 243 LPGEDFEVLLSSERR 257 >all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 263 bits (671), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 125/258 (48%), Positives = 178/258 (68%), Gaps = 1/258 (0%) Query: 71 LRIETGLLHAFEYNELLLYYQPKVDMQTLAITGAEALVRWQHPERGLLLPGEFIPIAEET 130 L +E L A E NE+++YYQP +D+QT IT EALVRWQHP RGL+ P +FIPIAE Sbjct: 3 LALENELHGALERNEIVVYYQPIIDLQTKQITAVEALVRWQHPTRGLVSPAKFIPIAEAN 62 Query: 131 GLIVQLSDWVLDAVCRQARAWKDAGLPPIRIALNVTAREFTRS-LPDRVGAALERHMLSG 189 GLIV++ +WVL C Q R W+ AGLPPIR+++N++AR+F S L + V ++ L Sbjct: 63 GLIVEIGEWVLRTACLQNRTWQLAGLPPIRMSVNLSARQFEESNLVELVSEIIQESGLHP 122 Query: 190 EWLELEITESMLMHSTDRVISIMEKICGLGITVSLDDFGTGYSSLSYLKRFPINTLKIDR 249 +LELE+TES LM R ++I++++ LG+ ++LDDFGTGYSSL+YLKRFP+N LKIDR Sbjct: 123 SYLELEVTESSLMTDIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKIDR 182 Query: 250 SFTMGIPDDTNDCAIASAIIGIAKQLRHKVIAEGVEDEKQFNFLREAGCNELQGYIFSRP 309 SF + + + A+ +AII +AK L+ K+ AEG+E ++Q ++L++ GC E QGY F P Sbjct: 183 SFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFGIP 242 Query: 310 VPAPDFHAMLLEGRKLAL 327 PA + +L +A+ Sbjct: 243 APAKEIMEILQPKEAIAV 260 >PA0285_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 274 Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 118/259 (45%), Positives = 173/259 (66%), Gaps = 1/259 (0%) Query: 55 GYACYSEEMNRNTLDLLRIETGLLHAFEYNELLLYYQPKVDMQTLAITGAEALVRWQHPE 114 YA Y+ + +++E+ L HA E++EL ++YQP D+ + I G E+LVRWQHPE Sbjct: 1 AYAFYTRVLTARARAHVQVESALRHALEHDELRVHYQPVHDLASGRIVGVESLVRWQHPE 60 Query: 115 RGLLLPGEFIPIAEETGLIVQLSDWVLDAVCRQARAWKDAGLPPIRIALNVTAREFTRS- 173 RGL+ PGEF+P+AEE GLI L +WVL CRQ R W+ G+ +A+NV++R F R Sbjct: 61 RGLVPPGEFVPVAEECGLIAALDNWVLKRACRQMREWQQRGVELEFVAVNVSSRLFNRGG 120 Query: 174 LPDRVGAALERHMLSGEWLELEITESMLMHSTDRVISIMEKICGLGITVSLDDFGTGYSS 233 L +R+ ALE L +LELE+TES +M ++ ++++ ++ LG+ +++DDFGTGYSS Sbjct: 121 LEERIANALEESGLEPRYLELEVTESAVMEDFEQSLNLLCRLRILGVNLAIDDFGTGYSS 180 Query: 234 LSYLKRFPINTLKIDRSFTMGIPDDTNDCAIASAIIGIAKQLRHKVIAEGVEDEKQFNFL 293 L LKR P++ LKID+ F G+P +D AIA AI+ +A+ + +V+AEG+E + Q FL Sbjct: 181 LMRLKRLPVHKLKIDQGFVAGLPGAVDDAAIARAIVALAQSMGLRVVAEGIEHQDQALFL 240 Query: 294 REAGCNELQGYIFSRPVPA 312 RE GC+ QGY + RP PA Sbjct: 241 REHGCDFGQGYWYGRPQPA 259 >PA1727_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 254 Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 119/248 (47%), Positives = 161/248 (64%), Gaps = 1/248 (0%) Query: 71 LRIETGLLHAFEYNELLLYYQPKVDMQTLAITGAEALVRWQHPERGLLLPGEFIPIAEET 130 L++ L A E +L+L+YQPKV + G EAL+RW+HP+ GL+ PG+F+P+AE+T Sbjct: 4 LQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEALLRWEHPQHGLITPGQFLPLAEKT 63 Query: 131 GLIVQLSDWVLDAVCRQARAWKDAGLPPIRIALNVTAREFTRS-LPDRVGAALERHMLSG 189 GLIVQ+ +WVLD CRQ R W D G IA+N++A +F + L D V AL RH L Sbjct: 64 GLIVQIGEWVLDEACRQMRLWLDGGHADWNIAVNLSALQFAHAGLVDSVRNALLRHSLEP 123 Query: 190 EWLELEITESMLMHSTDRVISIMEKICGLGITVSLDDFGTGYSSLSYLKRFPINTLKIDR 249 L LE+TES M D + I+E++ +G+ +S+DDFGTGYSSL YLKR P + LKIDR Sbjct: 124 SHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTGYSSLLYLKRLPASELKIDR 183 Query: 250 SFTMGIPDDTNDCAIASAIIGIAKQLRHKVIAEGVEDEKQFNFLREAGCNELQGYIFSRP 309 F + D++D AI SAI+ + + L K++AEGVE E Q FL GCN LQG++ RP Sbjct: 184 GFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTRLGCNSLQGFLLGRP 243 Query: 310 VPAPDFHA 317 +PA A Sbjct: 244 MPAEQLLA 251 >PA4601_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 247 Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/232 (49%), Positives = 157/232 (67%), Gaps = 1/232 (0%) Query: 85 ELLLYYQPKVDMQTLAITGAEALVRWQHPERGLLLPGEFIPIAEETGLIVQLSDWVLDAV 144 E +L+YQP+ +TGAEAL+RWQHP RGL+ P EFIP+ EE GL+ Q+ DW+L Sbjct: 1 EFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEA 60 Query: 145 CRQARAWKDAGLPPIRIALNVTAREFTR-SLPDRVGAALERHMLSGEWLELEITESMLMH 203 C+Q R+W A + ++++N++AR+F L +R+ A L + LELE+TES+LM Sbjct: 61 CKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMS 120 Query: 204 STDRVISIMEKICGLGITVSLDDFGTGYSSLSYLKRFPINTLKIDRSFTMGIPDDTNDCA 263 + I+ + LG+ +++DDFGTGYSSL+YLK+FPI+ LKIDRSF G+P D Sbjct: 121 DVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQ 180 Query: 264 IASAIIGIAKQLRHKVIAEGVEDEKQFNFLREAGCNELQGYIFSRPVPAPDF 315 IA AII +A L VIAEGVE + Q +FLRE GC+E+QGY+F RP+PA F Sbjct: 181 IARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF 232