BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0384.p (265 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1330 [H] COG0303 Molybdopterin biosynthesis enzyme Rso Ralsto... 303 3e-82 PA3914 [H] COG0303 Molybdopterin biosynthesis enzyme Pae Pseudom... 191 1e-48 VC1527_2 [H] COG0303 Molybdopterin biosynthesis enzyme Vch Vibri... 179 8e-45 PA3028 [H] COG0303 Molybdopterin biosynthesis enzyme Pae Pseudom... 177 1e-44 PM0694 [H] COG0303 Molybdopterin biosynthesis enzyme Pmu Pasteur... 171 2e-42 >RSc1330 [H] COG0303 Molybdopterin biosynthesis enzyme Rso Ralstonia solanacearum Length = 419 Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 148/202 (73%), Positives = 173/202 (85%), Gaps = 5/202 (2%) Query: 44 QELGLAASIGQAQLQVLRRVRVAVFFTGDELTMPGQPLKPGGIYNSNRFLLRGLLQKLGC 103 Q+LGLAAS+G A LQV+RR RVAVFFTGDEL MPG+PLKPG IYNSNRF LR LL+ LGC Sbjct: 167 QQLGLAASVGCAGLQVVRRPRVAVFFTGDELAMPGEPLKPGAIYNSNRFTLRALLENLGC 226 Query: 104 QVSDFGIVPDSLQATRETLREAAREHDLIITSGGVSVGEEDHVKPAVEAEGRINMWQIAM 163 +++DFGIVPD+LQATR+TLREAA HDLIITSGGVSVGEEDH+KPAVEAEGR+N+WQIA+ Sbjct: 227 EITDFGIVPDTLQATRDTLREAAEAHDLIITSGGVSVGEEDHIKPAVEAEGRLNLWQIAI 286 Query: 164 KPGKPLAFGQVRRGEGTG---EAFFMGLPGNPVSSFVTFLLFVRPFLLRLQGLPREAVLP 220 KPGKPLAFG+VRR +G AFF+GLPGNPVSSFVTFLLFVRPF+LRL G+ + V P Sbjct: 287 KPGKPLAFGEVRRPQGMAGGPAAFFIGLPGNPVSSFVTFLLFVRPFILRLLGV--DDVTP 344 Query: 221 QAVALRADFDWPRADRRRKFXR 242 + + +RADF P+ DRR +F R Sbjct: 345 KRIPMRADFALPKGDRRNEFLR 366 >PA3914 [H] COG0303 Molybdopterin biosynthesis enzyme Pae Pseudomonas aeruginosa Length = 407 Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 103/202 (50%), Positives = 139/202 (68%), Gaps = 8/202 (3%) Query: 41 LRPQELGLAASIGQAQLQVLRRVRVAVFFTGDELTMPGQPLKPGGIYNSNRFLLRGLLQK 100 LRPQELGL AS+G A + V RR+R+ + +GDEL PGQ L G IYN+NR+ + LL+ Sbjct: 160 LRPQELGLLASLGVATVSVRRRLRIGLLSSGDELREPGQTLLAGQIYNANRYCIGALLRG 219 Query: 101 LGCQVSDFGIVPDSLQATRETLREAAREHDLIITSGGVSVGEEDHVKPAVEAEGRINMWQ 160 LG +V D ++ D L A+R+ L AA E D ++TSGGVSVGEEDH+K A+ G +N+W+ Sbjct: 220 LGFEVHDEEVLADELVASRDALSLAASEWDALVTSGGVSVGEEDHLKRAIAELGEVNLWR 279 Query: 161 IAMKPGKPLAFGQVRRGEGTGEAFFMGLPGNPVSSFVTFLLFVRPFLLRLQGLPREAVLP 220 +A++PGKP AFG V G+ ++GLPGNP ++ VT LL RPFLLR QGL V+P Sbjct: 280 LAIQPGKPFAFGSV-----AGKP-WLGLPGNPAAALVTALLVARPFLLRQQGL--FDVVP 331 Query: 221 QAVALRADFDWPRADRRRKFXR 242 + +AL A FDWP+ RR++ R Sbjct: 332 RPLALPAAFDWPQPRARRQYLR 353 >VC1527_2 [H] COG0303 Molybdopterin biosynthesis enzyme Vch Vibrio cholerae Length = 400 Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 89/178 (50%), Positives = 124/178 (69%), Gaps = 7/178 (3%) Query: 35 SIGQAXLRPQELGLAASIGQAQLQVLRRVRVAVFFTGDELTMPGQPLKPGGIYNSNRFLL 94 SIGQ L P E+G+ AS+G A R ++VA+F TGDE+ PG ++P I++SNRF L Sbjct: 144 SIGQRVLSP-EMGMLASLGFAHADAFRSLKVAIFSTGDEVQAPGGDIEPNSIFDSNRFTL 202 Query: 95 RGLLQKLGCQVSDFGIVPDSLQATRETLREAAREHDLIITSGGVSVGEEDHVKPAVEAEG 154 GLL++LGCQV D GI+ D + L +AA++ D++ITSGGVSVG+ D +K A+E G Sbjct: 203 TGLLKQLGCQVIDLGIIEDDEAKMMQVLEQAAKQADVVITSGGVSVGDADFIKSALEKLG 262 Query: 155 RINMWQIAMKPGKPLAFGQVRRGEGTGEAFFMGLPGNPVSSFVTFLLFVRPFLLRLQG 212 +I+ W+I M+PG+PLAFGQ+ G+ FF GLPGNPV+ V+F+ FV P L ++QG Sbjct: 263 QIDFWRINMRPGRPLAFGQI-----AGKPFF-GLPGNPVAVMVSFINFVEPALRKMQG 314 >PA3028 [H] COG0303 Molybdopterin biosynthesis enzyme Pae Pseudomonas aeruginosa Length = 405 Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 109/235 (46%), Positives = 141/235 (60%), Gaps = 22/235 (9%) Query: 41 LRPQELGLAASIGQAQLQVLRRVRVAVFFTGDELTMPGQPLKPGGIYNSNRFLLRGLLQK 100 LR ELGLAAS+G A L+V R+ RVA+ TGDEL GQPL+ G IYNSNR LL+ LQ+ Sbjct: 160 LRSIELGLAASLGYAALEVRRKPRVALLSTGDELVEAGQPLQAGQIYNSNRPLLKDWLQR 219 Query: 101 LGCQVSDFGIVPDSLQATRETLREAAREHDLIITSGGVSVGEEDHVKPAVEAEGRINMWQ 160 LGC V D GI+PD L TRE L A DLI+++GGVSVGE D + A+ G + +W+ Sbjct: 220 LGCDVLDAGILPDDLARTRERLAGLA-GVDLILSTGGVSVGEADFLGMALREAGELTLWK 278 Query: 161 IAMKPGKPLAFGQVRRGEGTGEAFFMGLPGNPVSSFVTFLLFVRPFLLRLQGLPREAVLP 220 +A+KPGKPL GQ + +GLPGNP S+ VTF L RP+LLR G+ + V P Sbjct: 279 LAIKPGKPLTVGQFQ------GIPVIGLPGNPASTLVTFALLARPYLLRRLGVAQ--VAP 330 Query: 221 QAVALRADFDWPRADRRRKFXR------------NSCACVAMRKAAWTSSPARVR 263 V + A F W +A +RR++ R N + V +R A+W VR Sbjct: 331 LRVEVPAGFAWTKAGQRREYLRGRLEQGRAVLYPNQSSGV-LRSASWAEGLVEVR 384 >PM0694 [H] COG0303 Molybdopterin biosynthesis enzyme Pmu Pasteurella multocida Length = 406 Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/204 (45%), Positives = 127/204 (62%), Gaps = 7/204 (3%) Query: 39 AXLRPQELGLAASIGQAQLQVLRRVRVAVFFTGDELTMPGQPLKPGGIYNSNRFLLRGLL 98 + L L L AS+G ++V R++VAV TGDEL GQPLK G IY++NRF ++ LL Sbjct: 151 SLLNAVSLPLLASLGIDNVKVFPRLKVAVLSTGDELVPVGQPLKEGQIYDTNRFTIQLLL 210 Query: 99 QKLGCQVSDFGIVPDSLQATRETLREAAREHDLIITSGGVSVGEEDHVKPAVEAEGRINM 158 +KL C++ DFG++PD+ Q + EA ++ DL+ITSGGVSVGE D K +E G++N Sbjct: 211 EKLNCEILDFGLLPDNEQEFEKAFIEAQQQADLVITSGGVSVGEADFTKKVLEKVGQVNF 270 Query: 159 WQIAMKPGKPLAFGQVRRGEGTGEAFFMGLPGNPVSSFVTFLLFVRPFLLRLQGLPREAV 218 W+IAMKPGKP AFG+++ A+F GLPGNPVS+ TF V+P + +L G + Sbjct: 271 WKIAMKPGKPFAFGRLKN------AWFCGLPGNPVSALATFYQLVQPVIAKLSGYSQWKA 324 Query: 219 LPQAVALRADFDWPRADRRRKFXR 242 PQ + A +A R F R Sbjct: 325 -PQRLTAIAATKMKKAPGRLDFQR 347